Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 SSR1P2-201ENST00000415208 787 ntBASIC6.38□□□□□ -1.39
POLR2AP24928 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.38□□□□□ -1.39
POLR2AP24928 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC6.38□□□□□ -1.39
POLR2AP24928 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC6.38□□□□□ -1.39
POLR2AP24928 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC6.38□□□□□ -1.39
POLR2AP24928 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
POLR2AP24928 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC6.38□□□□□ -1.39
POLR2AP24928 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
POLR2AP24928 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.38□□□□□ -1.39
POLR2AP24928 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.38□□□□□ -1.39
POLR2AP24928 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
POLR2AP24928 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
POLR2AP24928 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.37□□□□□ -1.39
POLR2AP24928 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
POLR2AP24928 AC023632.6-201ENST00000624338 2177 ntBASIC6.37□□□□□ -1.39
POLR2AP24928 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC6.37□□□□□ -1.39
POLR2AP24928 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
POLR2AP24928 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
POLR2AP24928 RNU1-146P-201ENST00000364015 165 ntBASIC6.37□□□□□ -1.39
POLR2AP24928 RN7SKP151-201ENST00000410230 316 ntBASIC6.37□□□□□ -1.39
POLR2AP24928 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC6.37□□□□□ -1.39
POLR2AP24928 VN1R21P-201ENST00000426703 765 ntBASIC6.37□□□□□ -1.39
POLR2AP24928 MTCO1P57-201ENST00000432182 261 ntBASIC6.37□□□□□ -1.39
POLR2AP24928 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.37□□□□□ -1.39
POLR2AP24928 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC6.37□□□□□ -1.39
POLR2AP24928 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC6.37□□□□□ -1.39
POLR2AP24928 ZNF736P6Y-201ENST00000447526 1213 ntBASIC6.37□□□□□ -1.39
POLR2AP24928 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC6.37□□□□□ -1.39
POLR2AP24928 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC6.37□□□□□ -1.39
POLR2AP24928 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC6.37□□□□□ -1.39
POLR2AP24928 SNORD116-30-201ENST00000516468 85 ntBASIC6.37□□□□□ -1.39
POLR2AP24928 MAL2-208ENST00000523307 556 ntTSL 4 BASIC6.37□□□□□ -1.39
POLR2AP24928 AC139103.1-201ENST00000534696 1030 ntBASIC6.37□□□□□ -1.39
POLR2AP24928 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC6.37□□□□□ -1.39
POLR2AP24928 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.37□□□□□ -1.39
POLR2AP24928 RPL27-207ENST00000590864 569 ntTSL 2 BASIC6.37□□□□□ -1.39
POLR2AP24928 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC6.37□□□□□ -1.39
POLR2AP24928 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
POLR2AP24928 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
POLR2AP24928 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
POLR2AP24928 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
POLR2AP24928 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC6.37□□□□□ -1.39
POLR2AP24928 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
POLR2AP24928 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
POLR2AP24928 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
POLR2AP24928 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
POLR2AP24928 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
POLR2AP24928 PABPC1P8-201ENST00000452851 2086 ntBASIC6.37□□□□□ -1.39
POLR2AP24928 RNU4-2-201ENST00000365668 141 ntBASIC6.37□□□□□ -1.39
POLR2AP24928 DBIP1-201ENST00000401435 260 ntBASIC6.37□□□□□ -1.39
POLR2AP24928 TMEM183AP1-205ENST00000432739 290 ntBASIC6.37□□□□□ -1.39
POLR2AP24928 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC6.37□□□□□ -1.39
POLR2AP24928 AL138878.2-201ENST00000440581 1241 ntBASIC6.37□□□□□ -1.39
POLR2AP24928 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC6.37□□□□□ -1.39
POLR2AP24928 AC009220.1-201ENST00000451614 275 ntBASIC6.37□□□□□ -1.39
POLR2AP24928 RPS17P5-201ENST00000498293 408 ntBASIC6.37□□□□□ -1.39
POLR2AP24928 MTND3P24-201ENST00000506306 329 ntBASIC6.37□□□□□ -1.39
POLR2AP24928 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.37□□□□□ -1.39
POLR2AP24928 AC012213.2-201ENST00000562917 4597 ntBASIC6.37□□□□□ -1.39
POLR2AP24928 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC6.37□□□□□ -1.39
POLR2AP24928 AC083809.1-201ENST00000615051 472 ntBASIC6.37□□□□□ -1.39
POLR2AP24928 U6.48-201ENST00000618523 106 ntBASIC6.37□□□□□ -1.39
POLR2AP24928 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC6.36□□□□□ -1.39
POLR2AP24928 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
POLR2AP24928 AC022164.1-201ENST00000568767 2673 ntBASIC6.36□□□□□ -1.39
POLR2AP24928 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
POLR2AP24928 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
POLR2AP24928 CLASP2-213ENST00000480013 5972 ntTSL 5 BASIC6.36□□□□□ -1.39
POLR2AP24928 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
POLR2AP24928 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
POLR2AP24928 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
POLR2AP24928 RNU6-584P-201ENST00000410350 95 ntBASIC6.36□□□□□ -1.39
POLR2AP24928 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC6.36□□□□□ -1.39
POLR2AP24928 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC6.36□□□□□ -1.39
POLR2AP24928 AC012512.1-201ENST00000446594 718 ntBASIC6.36□□□□□ -1.39
POLR2AP24928 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC6.36□□□□□ -1.39
POLR2AP24928 NUTF2P7-201ENST00000453086 375 ntBASIC6.36□□□□□ -1.39
POLR2AP24928 AL122001.1-201ENST00000457027 370 ntBASIC6.36□□□□□ -1.39
POLR2AP24928 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
POLR2AP24928 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC6.36□□□□□ -1.39
POLR2AP24928 TOMM22P4-201ENST00000511318 336 ntBASIC6.36□□□□□ -1.39
POLR2AP24928 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC6.36□□□□□ -1.39
POLR2AP24928 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
POLR2AP24928 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC6.36□□□□□ -1.39
POLR2AP24928 AC091057.3-201ENST00000602684 733 ntBASIC6.36□□□□□ -1.39
POLR2AP24928 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC6.36□□□□□ -1.39
POLR2AP24928 NANOGP3-201ENST00000605855 286 ntBASIC6.36□□□□□ -1.39
POLR2AP24928 AC009032.1-201ENST00000617574 431 ntBASIC6.36□□□□□ -1.39
POLR2AP24928 MTND2P41-201ENST00000637599 773 ntBASIC6.36□□□□□ -1.39
POLR2AP24928 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC6.36□□□□□ -1.39
POLR2AP24928 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC6.36□□□□□ -1.39
POLR2AP24928 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
POLR2AP24928 AC092821.2-201ENST00000545710 2042 ntBASIC6.36□□□□□ -1.39
POLR2AP24928 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
POLR2AP24928 THAP12P4-201ENST00000528321 2266 ntBASIC6.36□□□□□ -1.39
POLR2AP24928 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
POLR2AP24928 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
POLR2AP24928 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
POLR2AP24928 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
POLR2AP24928 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms