Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
BDNFP23560 AL159987.1-201ENST00000347911 293 ntBASIC6.11□□□□□ -1.43
BDNFP23560 SNORA64.1-201ENST00000362600 132 ntBASIC6.11□□□□□ -1.43
BDNFP23560 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC6.11□□□□□ -1.43
BDNFP23560 SNORA70.9-201ENST00000384370 135 ntBASIC6.11□□□□□ -1.43
BDNFP23560 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
BDNFP23560 SDHDP6-201ENST00000414693 480 ntBASIC6.11□□□□□ -1.43
BDNFP23560 AC048351.1-201ENST00000420064 602 ntBASIC6.11□□□□□ -1.43
BDNFP23560 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.11□□□□□ -1.43
BDNFP23560 AC019205.1-201ENST00000421830 730 ntBASIC6.11□□□□□ -1.43
BDNFP23560 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.11□□□□□ -1.43
BDNFP23560 AL022331.1-201ENST00000429025 477 ntBASIC6.11□□□□□ -1.43
BDNFP23560 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC6.11□□□□□ -1.43
BDNFP23560 TRIM60P13-201ENST00000432350 1283 ntBASIC6.11□□□□□ -1.43
BDNFP23560 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
BDNFP23560 LRRC37A14P-201ENST00000452297 462 ntBASIC6.11□□□□□ -1.43
BDNFP23560 OR2AF1P-201ENST00000454899 889 ntBASIC6.11□□□□□ -1.43
BDNFP23560 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6.11□□□□□ -1.43
BDNFP23560 RN7SL717P-201ENST00000478343 297 ntBASIC6.11□□□□□ -1.43
BDNFP23560 METTL15P1-201ENST00000481421 1045 ntBASIC6.11□□□□□ -1.43
BDNFP23560 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC6.11□□□□□ -1.43
BDNFP23560 FGB-207ENST00000509493 1164 ntTSL 5 BASIC6.11□□□□□ -1.43
BDNFP23560 RN7SKP248-201ENST00000516278 305 ntBASIC6.11□□□□□ -1.43
BDNFP23560 SNORA43.3-201ENST00000517240 103 ntBASIC6.11□□□□□ -1.43
BDNFP23560 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC6.11□□□□□ -1.43
BDNFP23560 AC021678.3-201ENST00000517893 476 ntBASIC6.11□□□□□ -1.43
BDNFP23560 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.11□□□□□ -1.43
BDNFP23560 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
BDNFP23560 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.11□□□□□ -1.43
BDNFP23560 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC6.11□□□□□ -1.43
BDNFP23560 SNORD95-201ENST00000579879 68 ntBASIC6.11□□□□□ -1.43
BDNFP23560 RN7SL753P-201ENST00000581238 290 ntBASIC6.11□□□□□ -1.43
BDNFP23560 AC012467.1-201ENST00000607740 256 ntBASIC6.11□□□□□ -1.43
BDNFP23560 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC6.11□□□□□ -1.43
BDNFP23560 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.11□□□□□ -1.43
BDNFP23560 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.11□□□□□ -1.43
BDNFP23560 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.11□□□□□ -1.43
BDNFP23560 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
BDNFP23560 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
BDNFP23560 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC6.11□□□□□ -1.43
BDNFP23560 MAPK10-338ENST00000641647 3362 ntBASIC6.11□□□□□ -1.43
BDNFP23560 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
BDNFP23560 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
BDNFP23560 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC6.11□□□□□ -1.43
BDNFP23560 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC6.11□□□□□ -1.43
BDNFP23560 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
BDNFP23560 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.1□□□□□ -1.43
BDNFP23560 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
BDNFP23560 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
BDNFP23560 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.1□□□□□ -1.43
BDNFP23560 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.1□□□□□ -1.43
BDNFP23560 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.1□□□□□ -1.43
BDNFP23560 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
BDNFP23560 MRE11P1-201ENST00000464884 2127 ntBASIC6.1□□□□□ -1.43
BDNFP23560 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
BDNFP23560 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
BDNFP23560 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.1□□□□□ -1.43
BDNFP23560 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
BDNFP23560 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
BDNFP23560 MIR323A-201ENST00000362199 86 ntBASIC6.1□□□□□ -1.43
BDNFP23560 RNU4-44P-201ENST00000363050 141 ntBASIC6.1□□□□□ -1.43
BDNFP23560 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.1□□□□□ -1.43
BDNFP23560 AC211486.3-201ENST00000412694 621 ntBASIC6.1□□□□□ -1.43
BDNFP23560 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC6.1□□□□□ -1.43
BDNFP23560 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC6.1□□□□□ -1.43
BDNFP23560 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.1□□□□□ -1.43
BDNFP23560 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC6.1□□□□□ -1.43
BDNFP23560 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.1□□□□□ -1.43
BDNFP23560 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC6.1□□□□□ -1.43
BDNFP23560 AC002504.1-201ENST00000438281 691 ntBASIC6.1□□□□□ -1.43
BDNFP23560 EEF1B2P6-201ENST00000445713 673 ntBASIC6.1□□□□□ -1.43
BDNFP23560 MTND3P4-201ENST00000453537 303 ntBASIC6.1□□□□□ -1.43
BDNFP23560 FRG2FP-204ENST00000453982 852 ntBASIC6.1□□□□□ -1.43
BDNFP23560 OSTCP1-201ENST00000455507 450 ntBASIC6.1□□□□□ -1.43
BDNFP23560 AC023141.9-201ENST00000458734 412 ntBASIC6.1□□□□□ -1.43
BDNFP23560 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC6.1□□□□□ -1.43
BDNFP23560 PPIAP21-201ENST00000464473 501 ntBASIC6.1□□□□□ -1.43
BDNFP23560 AC006539.1-201ENST00000481419 501 ntBASIC6.1□□□□□ -1.43
BDNFP23560 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC6.1□□□□□ -1.43
BDNFP23560 TRBV5-2-201ENST00000489095 273 ntBASIC6.1□□□□□ -1.43
BDNFP23560 AC106872.4-201ENST00000510050 523 ntBASIC6.1□□□□□ -1.43
BDNFP23560 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.1□□□□□ -1.43
BDNFP23560 RNU6-615P-201ENST00000516065 106 ntBASIC6.1□□□□□ -1.43
BDNFP23560 TMEM97P2-201ENST00000517841 403 ntBASIC6.1□□□□□ -1.43
BDNFP23560 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.1□□□□□ -1.43
BDNFP23560 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC6.1□□□□□ -1.43
BDNFP23560 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.1□□□□□ -1.43
BDNFP23560 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC6.1□□□□□ -1.43
BDNFP23560 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
BDNFP23560 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
BDNFP23560 AC008083.2-201ENST00000546707 476 ntBASIC6.1□□□□□ -1.43
BDNFP23560 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC6.1□□□□□ -1.43
BDNFP23560 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
BDNFP23560 AC096996.1-201ENST00000563813 325 ntBASIC6.1□□□□□ -1.43
BDNFP23560 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC6.1□□□□□ -1.43
BDNFP23560 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC6.1□□□□□ -1.43
BDNFP23560 AC022884.3-201ENST00000579571 248 ntBASIC6.1□□□□□ -1.43
BDNFP23560 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC6.1□□□□□ -1.43
BDNFP23560 BX322635.1-201ENST00000605804 496 ntBASIC6.1□□□□□ -1.43
BDNFP23560 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 381.6 ms