Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.52□□□□□ -1.69
CCL1P22362 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CCL1P22362 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.52□□□□□ -1.69
CCL1P22362 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CCL1P22362 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
CCL1P22362 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCL1P22362 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCL1P22362 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCL1P22362 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.52□□□□□ -1.69
CCL1P22362 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.52□□□□□ -1.69
CCL1P22362 OR8V1P-201ENST00000395193 873 ntBASIC4.52□□□□□ -1.69
CCL1P22362 RNU2-18P-201ENST00000411224 162 ntBASIC4.52□□□□□ -1.69
CCL1P22362 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.52□□□□□ -1.69
CCL1P22362 REREP1Y-201ENST00000422655 198 ntBASIC4.52□□□□□ -1.69
CCL1P22362 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC4.52□□□□□ -1.69
CCL1P22362 REREP2Y-201ENST00000439103 200 ntBASIC4.52□□□□□ -1.69
CCL1P22362 AC073109.1-201ENST00000445066 978 ntBASIC4.52□□□□□ -1.69
CCL1P22362 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC4.52□□□□□ -1.69
CCL1P22362 PPIA-203ENST00000451562 544 ntTSL 2 BASIC4.52□□□□□ -1.69
CCL1P22362 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CCL1P22362 AC108161.1-201ENST00000461060 402 ntBASIC4.52□□□□□ -1.69
CCL1P22362 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC4.52□□□□□ -1.69
CCL1P22362 RPL7P6-201ENST00000480903 738 ntBASIC4.52□□□□□ -1.69
CCL1P22362 MORF4L2P1-201ENST00000503761 858 ntBASIC4.52□□□□□ -1.69
CCL1P22362 USP9YP2-201ENST00000504503 1000 ntBASIC4.52□□□□□ -1.69
CCL1P22362 AC097173.1-201ENST00000505862 819 ntBASIC4.52□□□□□ -1.69
CCL1P22362 ASNSP4-201ENST00000511103 447 ntBASIC4.52□□□□□ -1.69
CCL1P22362 USP9YP1-201ENST00000513521 1002 ntBASIC4.52□□□□□ -1.69
CCL1P22362 AC021733.2-201ENST00000518830 497 ntBASIC4.52□□□□□ -1.69
CCL1P22362 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC4.52□□□□□ -1.69
CCL1P22362 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC4.52□□□□□ -1.69
CCL1P22362 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CCL1P22362 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC4.52□□□□□ -1.69
CCL1P22362 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.52□□□□□ -1.69
CCL1P22362 HOTTIP_3.1-201ENST00000619957 337 ntBASIC4.52□□□□□ -1.69
CCL1P22362 AC138965.3-201ENST00000623875 498 ntBASIC4.52□□□□□ -1.69
CCL1P22362 MIR1910-201ENST00000636955 80 ntBASIC4.52□□□□□ -1.69
CCL1P22362 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCL1P22362 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CCL1P22362 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.52□□□□□ -1.69
CCL1P22362 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.52□□□□□ -1.69
CCL1P22362 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
CCL1P22362 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCL1P22362 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CCL1P22362 CASC19-248ENST00000641674 1356 ntBASIC4.52□□□□□ -1.69
CCL1P22362 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.52□□□□□ -1.69
CCL1P22362 AC092747.4-201ENST00000620519 1861 ntBASIC4.52□□□□□ -1.69
CCL1P22362 MTCO1P7-201ENST00000419523 1542 ntBASIC4.51□□□□□ -1.69
CCL1P22362 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCL1P22362 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.51□□□□□ -1.69
CCL1P22362 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCL1P22362 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CCL1P22362 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCL1P22362 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCL1P22362 RN7SKP124-201ENST00000364730 341 ntBASIC4.51□□□□□ -1.69
CCL1P22362 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CCL1P22362 AL390316.1-201ENST00000406279 553 ntBASIC4.51□□□□□ -1.69
CCL1P22362 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC4.51□□□□□ -1.69
CCL1P22362 RPL24P2-201ENST00000421023 475 ntBASIC4.51□□□□□ -1.69
CCL1P22362 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.51□□□□□ -1.69
CCL1P22362 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC4.51□□□□□ -1.69
CCL1P22362 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC4.51□□□□□ -1.69
CCL1P22362 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.51□□□□□ -1.69
CCL1P22362 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.51□□□□□ -1.69
CCL1P22362 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC4.51□□□□□ -1.69
CCL1P22362 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CCL1P22362 AL157385.1-201ENST00000446973 268 ntBASIC4.51□□□□□ -1.69
CCL1P22362 RPL35AP19-201ENST00000469425 329 ntBASIC4.51□□□□□ -1.69
CCL1P22362 AC100832.1-201ENST00000471945 383 ntBASIC4.51□□□□□ -1.69
CCL1P22362 AC135999.1-201ENST00000478962 479 ntBASIC4.51□□□□□ -1.69
CCL1P22362 RN7SL273P-201ENST00000481561 299 ntBASIC4.51□□□□□ -1.69
CCL1P22362 AC005412.2-201ENST00000492004 341 ntBASIC4.51□□□□□ -1.69
CCL1P22362 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC4.51□□□□□ -1.69
CCL1P22362 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC4.51□□□□□ -1.69
CCL1P22362 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC4.51□□□□□ -1.69
CCL1P22362 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.51□□□□□ -1.69
CCL1P22362 LDHBP3-201ENST00000514909 822 ntBASIC4.51□□□□□ -1.69
CCL1P22362 TMEM97P2-201ENST00000517841 403 ntBASIC4.51□□□□□ -1.69
CCL1P22362 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC4.51□□□□□ -1.69
CCL1P22362 LSM3P2-201ENST00000551246 273 ntBASIC4.51□□□□□ -1.69
CCL1P22362 AC009852.2-201ENST00000567898 485 ntBASIC4.51□□□□□ -1.69
CCL1P22362 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC4.51□□□□□ -1.69
CCL1P22362 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC4.51□□□□□ -1.69
CCL1P22362 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC4.51□□□□□ -1.69
CCL1P22362 MIR8080-201ENST00000622224 89 ntBASIC4.51□□□□□ -1.69
CCL1P22362 AL691477.1-201ENST00000624398 162 ntBASIC4.51□□□□□ -1.69
CCL1P22362 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC4.51□□□□□ -1.69
CCL1P22362 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.51□□□□□ -1.69
CCL1P22362 AC074101.1-201ENST00000637861 241 ntBASIC4.51□□□□□ -1.69
CCL1P22362 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CCL1P22362 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CCL1P22362 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
CCL1P22362 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
CCL1P22362 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCL1P22362 OR55B1P-203ENST00000641518 2602 ntBASIC4.51□□□□□ -1.69
CCL1P22362 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCL1P22362 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CCL1P22362 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.51□□□□□ -1.69
CCL1P22362 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
CCL1P22362 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms