Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
HLA-DPA1P20036 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
HLA-DPA1P20036 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.58□□□□□ -1.52
HLA-DPA1P20036 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HLA-DPA1P20036 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
HLA-DPA1P20036 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HLA-DPA1P20036 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.58□□□□□ -1.52
HLA-DPA1P20036 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HLA-DPA1P20036 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HLA-DPA1P20036 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
HLA-DPA1P20036 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.58□□□□□ -1.52
HLA-DPA1P20036 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
HLA-DPA1P20036 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.58□□□□□ -1.52
HLA-DPA1P20036 MIR323A-201ENST00000362199 86 ntBASIC5.58□□□□□ -1.52
HLA-DPA1P20036 RN7SKP6-201ENST00000364795 319 ntBASIC5.58□□□□□ -1.52
HLA-DPA1P20036 RN7SKP81-201ENST00000365603 331 ntBASIC5.58□□□□□ -1.52
HLA-DPA1P20036 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.58□□□□□ -1.52
HLA-DPA1P20036 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
HLA-DPA1P20036 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
HLA-DPA1P20036 U3.28-201ENST00000391249 210 ntBASIC5.58□□□□□ -1.52
HLA-DPA1P20036 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.58□□□□□ -1.52
HLA-DPA1P20036 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.58□□□□□ -1.52
HLA-DPA1P20036 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.58□□□□□ -1.52
HLA-DPA1P20036 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.58□□□□□ -1.52
HLA-DPA1P20036 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.58□□□□□ -1.52
HLA-DPA1P20036 FMO7P-201ENST00000436045 768 ntBASIC5.58□□□□□ -1.52
HLA-DPA1P20036 OR6D1P-201ENST00000436165 939 ntBASIC5.58□□□□□ -1.52
HLA-DPA1P20036 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.58□□□□□ -1.52
HLA-DPA1P20036 AC073465.2-201ENST00000440938 498 ntBASIC5.58□□□□□ -1.52
HLA-DPA1P20036 AC092106.1-201ENST00000444291 373 ntBASIC5.58□□□□□ -1.52
HLA-DPA1P20036 YWHAEP1-201ENST00000453697 763 ntBASIC5.58□□□□□ -1.52
HLA-DPA1P20036 RN7SL72P-201ENST00000460697 269 ntBASIC5.58□□□□□ -1.52
HLA-DPA1P20036 RPL7AP10-201ENST00000481016 791 ntBASIC5.58□□□□□ -1.52
HLA-DPA1P20036 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HLA-DPA1P20036 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.58□□□□□ -1.52
HLA-DPA1P20036 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.58□□□□□ -1.52
HLA-DPA1P20036 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.58□□□□□ -1.52
HLA-DPA1P20036 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.58□□□□□ -1.52
HLA-DPA1P20036 SEC11B-201ENST00000518383 499 ntBASIC5.58□□□□□ -1.52
HLA-DPA1P20036 AC020937.1-201ENST00000519677 1013 ntBASIC5.58□□□□□ -1.52
HLA-DPA1P20036 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.58□□□□□ -1.52
HLA-DPA1P20036 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.58□□□□□ -1.52
HLA-DPA1P20036 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.58□□□□□ -1.52
HLA-DPA1P20036 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.58□□□□□ -1.52
HLA-DPA1P20036 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.58□□□□□ -1.52
HLA-DPA1P20036 AC012616.1-201ENST00000600294 197 ntBASIC5.58□□□□□ -1.52
HLA-DPA1P20036 AC007620.3-201ENST00000608131 497 ntBASIC5.58□□□□□ -1.52
HLA-DPA1P20036 RN7SL787P-201ENST00000613000 284 ntBASIC5.58□□□□□ -1.52
HLA-DPA1P20036 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC5.58□□□□□ -1.52
HLA-DPA1P20036 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.58□□□□□ -1.52
HLA-DPA1P20036 AL355480.1-201ENST00000629041 99 ntBASIC5.58□□□□□ -1.52
HLA-DPA1P20036 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
HLA-DPA1P20036 AC006206.1-201ENST00000544842 3387 ntBASIC5.58□□□□□ -1.52
HLA-DPA1P20036 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
HLA-DPA1P20036 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.58□□□□□ -1.52
HLA-DPA1P20036 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HLA-DPA1P20036 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.58□□□□□ -1.52
HLA-DPA1P20036 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HLA-DPA1P20036 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.58□□□□□ -1.52
HLA-DPA1P20036 VPS35P1-201ENST00000563400 1518 ntBASIC5.58□□□□□ -1.52
HLA-DPA1P20036 AC093775.1-201ENST00000624154 1868 ntBASIC5.58□□□□□ -1.52
HLA-DPA1P20036 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
HLA-DPA1P20036 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HLA-DPA1P20036 AC104964.3-201ENST00000606115 2860 ntBASIC5.57□□□□□ -1.52
HLA-DPA1P20036 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.57□□□□□ -1.52
HLA-DPA1P20036 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
HLA-DPA1P20036 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
HLA-DPA1P20036 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HLA-DPA1P20036 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.57□□□□□ -1.52
HLA-DPA1P20036 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
HLA-DPA1P20036 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.57□□□□□ -1.52
HLA-DPA1P20036 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.57□□□□□ -1.52
HLA-DPA1P20036 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
HLA-DPA1P20036 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HLA-DPA1P20036 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.57□□□□□ -1.52
HLA-DPA1P20036 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.57□□□□□ -1.52
HLA-DPA1P20036 U3.23-201ENST00000391132 200 ntBASIC5.57□□□□□ -1.52
HLA-DPA1P20036 AL136131.1-201ENST00000406079 803 ntBASIC5.57□□□□□ -1.52
HLA-DPA1P20036 RPSAP35-201ENST00000413753 818 ntBASIC5.57□□□□□ -1.52
HLA-DPA1P20036 GLUD1P9-201ENST00000420997 1173 ntBASIC5.57□□□□□ -1.52
HLA-DPA1P20036 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.57□□□□□ -1.52
HLA-DPA1P20036 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC5.57□□□□□ -1.52
HLA-DPA1P20036 RPL31P20-201ENST00000449593 360 ntBASIC5.57□□□□□ -1.52
HLA-DPA1P20036 PPIAP20-201ENST00000449839 135 ntBASIC5.57□□□□□ -1.52
HLA-DPA1P20036 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC5.57□□□□□ -1.52
HLA-DPA1P20036 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HLA-DPA1P20036 AL133244.1-201ENST00000456007 258 ntBASIC5.57□□□□□ -1.52
HLA-DPA1P20036 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
HLA-DPA1P20036 RN7SL174P-201ENST00000475578 289 ntBASIC5.57□□□□□ -1.52
HLA-DPA1P20036 RN7SL273P-201ENST00000481561 299 ntBASIC5.57□□□□□ -1.52
HLA-DPA1P20036 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC5.57□□□□□ -1.52
HLA-DPA1P20036 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.57□□□□□ -1.52
HLA-DPA1P20036 AC021106.1-201ENST00000509020 1058 ntBASIC5.57□□□□□ -1.52
HLA-DPA1P20036 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.57□□□□□ -1.52
HLA-DPA1P20036 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC5.57□□□□□ -1.52
HLA-DPA1P20036 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.57□□□□□ -1.52
HLA-DPA1P20036 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.57□□□□□ -1.52
HLA-DPA1P20036 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC5.57□□□□□ -1.52
HLA-DPA1P20036 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HLA-DPA1P20036 CD24P2-201ENST00000565486 219 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms