Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
XRCC1P18887 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
XRCC1P18887 AP005432.1-201ENST00000580891 3485 ntBASIC5.39□□□□□ -1.55
XRCC1P18887 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.39□□□□□ -1.55
XRCC1P18887 AL022311.1-201ENST00000623726 19416 ntBASIC5.39□□□□□ -1.55
XRCC1P18887 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
XRCC1P18887 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
XRCC1P18887 PROS2P-201ENST00000474651 1951 ntBASIC5.39□□□□□ -1.55
XRCC1P18887 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.39□□□□□ -1.55
XRCC1P18887 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
XRCC1P18887 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
XRCC1P18887 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.39□□□□□ -1.55
XRCC1P18887 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
XRCC1P18887 RN7SKP59-201ENST00000410520 314 ntBASIC5.39□□□□□ -1.55
XRCC1P18887 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.39□□□□□ -1.55
XRCC1P18887 BX510359.3-201ENST00000422168 306 ntBASIC5.39□□□□□ -1.55
XRCC1P18887 CYCSP12-201ENST00000437729 300 ntBASIC5.39□□□□□ -1.55
XRCC1P18887 AC073465.2-201ENST00000440938 498 ntBASIC5.39□□□□□ -1.55
XRCC1P18887 GAPDHP14-201ENST00000450472 937 ntBASIC5.39□□□□□ -1.55
XRCC1P18887 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.39□□□□□ -1.55
XRCC1P18887 AC011225.1-201ENST00000457751 369 ntBASIC5.39□□□□□ -1.55
XRCC1P18887 OR2AO1P-201ENST00000476497 403 ntBASIC5.39□□□□□ -1.55
XRCC1P18887 RPS4XP14-201ENST00000493072 781 ntBASIC5.39□□□□□ -1.55
XRCC1P18887 RN7SKP99-201ENST00000517028 307 ntBASIC5.39□□□□□ -1.55
XRCC1P18887 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.39□□□□□ -1.55
XRCC1P18887 AC027026.1-201ENST00000532323 742 ntBASIC5.39□□□□□ -1.55
XRCC1P18887 AC078878.1-201ENST00000539832 958 ntBASIC5.39□□□□□ -1.55
XRCC1P18887 RN7SL290P-201ENST00000578661 300 ntBASIC5.39□□□□□ -1.55
XRCC1P18887 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.39□□□□□ -1.55
XRCC1P18887 MIR7853-201ENST00000584820 132 ntBASIC5.39□□□□□ -1.55
XRCC1P18887 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.39□□□□□ -1.55
XRCC1P18887 FKBP1AP1-201ENST00000594588 318 ntBASIC5.39□□□□□ -1.55
XRCC1P18887 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.39□□□□□ -1.55
XRCC1P18887 AC009237.13-201ENST00000603193 276 ntBASIC5.39□□□□□ -1.55
XRCC1P18887 IMMP1LP3-201ENST00000604197 224 ntBASIC5.39□□□□□ -1.55
XRCC1P18887 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.39□□□□□ -1.55
XRCC1P18887 AC022960.2-201ENST00000616300 666 ntBASIC5.39□□□□□ -1.55
XRCC1P18887 WBP1LP8-201ENST00000617401 327 ntBASIC5.39□□□□□ -1.55
XRCC1P18887 AC138965.3-201ENST00000623875 498 ntBASIC5.39□□□□□ -1.55
XRCC1P18887 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
XRCC1P18887 AC073869.7-201ENST00000640874 297 ntBASIC5.39□□□□□ -1.55
XRCC1P18887 CASC19-264ENST00000641912 1184 ntBASIC5.39□□□□□ -1.55
XRCC1P18887 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
XRCC1P18887 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
XRCC1P18887 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.39□□□□□ -1.55
XRCC1P18887 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
XRCC1P18887 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
XRCC1P18887 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
XRCC1P18887 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
XRCC1P18887 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.38□□□□□ -1.55
XRCC1P18887 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.38□□□□□ -1.55
XRCC1P18887 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
XRCC1P18887 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
XRCC1P18887 AL359715.3-201ENST00000569267 2123 ntBASIC5.38□□□□□ -1.55
XRCC1P18887 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
XRCC1P18887 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
XRCC1P18887 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.38□□□□□ -1.55
XRCC1P18887 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.38□□□□□ -1.55
XRCC1P18887 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
XRCC1P18887 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
XRCC1P18887 MIR1286-201ENST00000408112 78 ntBASIC5.38□□□□□ -1.55
XRCC1P18887 AL163193.1-201ENST00000444895 788 ntBASIC5.38□□□□□ -1.55
XRCC1P18887 RPL5P16-201ENST00000471467 790 ntBASIC5.38□□□□□ -1.55
XRCC1P18887 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.38□□□□□ -1.55
XRCC1P18887 AC020937.1-201ENST00000519677 1013 ntBASIC5.38□□□□□ -1.55
XRCC1P18887 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.38□□□□□ -1.55
XRCC1P18887 AC130364.2-201ENST00000528639 604 ntBASIC5.38□□□□□ -1.55
XRCC1P18887 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.38□□□□□ -1.55
XRCC1P18887 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.38□□□□□ -1.55
XRCC1P18887 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.38□□□□□ -1.55
XRCC1P18887 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.38□□□□□ -1.55
XRCC1P18887 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.38□□□□□ -1.55
XRCC1P18887 OR51C1P-201ENST00000608504 942 ntBASIC5.38□□□□□ -1.55
XRCC1P18887 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.38□□□□□ -1.55
XRCC1P18887 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
XRCC1P18887 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.38□□□□□ -1.55
XRCC1P18887 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
XRCC1P18887 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.38□□□□□ -1.55
XRCC1P18887 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
XRCC1P18887 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
XRCC1P18887 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.38□□□□□ -1.55
XRCC1P18887 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
XRCC1P18887 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
XRCC1P18887 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
XRCC1P18887 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.38□□□□□ -1.55
XRCC1P18887 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
XRCC1P18887 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
XRCC1P18887 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
XRCC1P18887 CDY11P-201ENST00000447168 1651 ntBASIC5.37□□□□□ -1.55
XRCC1P18887 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
XRCC1P18887 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
XRCC1P18887 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.37□□□□□ -1.55
XRCC1P18887 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.37□□□□□ -1.55
XRCC1P18887 AL034549.2-201ENST00000618285 3373 ntBASIC5.37□□□□□ -1.55
XRCC1P18887 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
XRCC1P18887 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
XRCC1P18887 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
XRCC1P18887 RNA5SP241-201ENST00000391326 114 ntBASIC5.37□□□□□ -1.55
XRCC1P18887 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.37□□□□□ -1.55
XRCC1P18887 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms