Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 AC010503.3-201ENST00000594355 540 ntBASIC4.66□□□□□ -1.66
CTLA4P16410 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.66□□□□□ -1.66
CTLA4P16410 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CTLA4P16410 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC4.66□□□□□ -1.66
CTLA4P16410 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.66□□□□□ -1.66
CTLA4P16410 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC4.66□□□□□ -1.66
CTLA4P16410 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC4.66□□□□□ -1.66
CTLA4P16410 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CTLA4P16410 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.66□□□□□ -1.66
CTLA4P16410 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
CTLA4P16410 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CTLA4P16410 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CTLA4P16410 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CTLA4P16410 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
CTLA4P16410 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.66□□□□□ -1.66
CTLA4P16410 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CTLA4P16410 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CTLA4P16410 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CTLA4P16410 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
CTLA4P16410 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.65□□□□□ -1.66
CTLA4P16410 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC4.65□□□□□ -1.66
CTLA4P16410 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
CTLA4P16410 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
CTLA4P16410 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CTLA4P16410 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
CTLA4P16410 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.65□□□□□ -1.67
CTLA4P16410 RNA5SP178-201ENST00000410380 128 ntBASIC4.65□□□□□ -1.67
CTLA4P16410 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.65□□□□□ -1.67
CTLA4P16410 AL390774.1-201ENST00000411924 246 ntBASIC4.65□□□□□ -1.67
CTLA4P16410 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.65□□□□□ -1.67
CTLA4P16410 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.65□□□□□ -1.67
CTLA4P16410 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.65□□□□□ -1.67
CTLA4P16410 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC4.65□□□□□ -1.67
CTLA4P16410 AC104843.2-201ENST00000427666 297 ntBASIC4.65□□□□□ -1.67
CTLA4P16410 BX119904.3-201ENST00000428194 957 ntBASIC4.65□□□□□ -1.67
CTLA4P16410 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC4.65□□□□□ -1.67
CTLA4P16410 CYCSP6-201ENST00000434498 302 ntBASIC4.65□□□□□ -1.67
CTLA4P16410 CYCSP12-201ENST00000437729 300 ntBASIC4.65□□□□□ -1.67
CTLA4P16410 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.65□□□□□ -1.67
CTLA4P16410 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CTLA4P16410 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.65□□□□□ -1.67
CTLA4P16410 AC245028.2-201ENST00000458673 253 ntBASIC4.65□□□□□ -1.67
CTLA4P16410 RPL7P40-201ENST00000481703 745 ntBASIC4.65□□□□□ -1.67
CTLA4P16410 AC012123.2-201ENST00000485809 248 ntBASIC4.65□□□□□ -1.67
CTLA4P16410 NIFKP7-201ENST00000503365 834 ntBASIC4.65□□□□□ -1.67
CTLA4P16410 AC006427.1-201ENST00000514359 712 ntBASIC4.65□□□□□ -1.67
CTLA4P16410 RNU6-941P-201ENST00000516346 108 ntBASIC4.65□□□□□ -1.67
CTLA4P16410 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC4.65□□□□□ -1.67
CTLA4P16410 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.65□□□□□ -1.67
CTLA4P16410 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
CTLA4P16410 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CTLA4P16410 AL359219.2-201ENST00000555184 348 ntBASIC4.65□□□□□ -1.67
CTLA4P16410 AC116158.1-201ENST00000560231 2129 ntBASIC4.65□□□□□ -1.67
CTLA4P16410 AC106730.2-201ENST00000566641 540 ntBASIC4.65□□□□□ -1.67
CTLA4P16410 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC4.65□□□□□ -1.67
CTLA4P16410 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC4.65□□□□□ -1.67
CTLA4P16410 AP000473.2-201ENST00000602659 1537 ntBASIC4.65□□□□□ -1.67
CTLA4P16410 OR5AQ1P-202ENST00000641257 1534 ntBASIC4.65□□□□□ -1.67
CTLA4P16410 OR55B1P-203ENST00000641518 2602 ntBASIC4.65□□□□□ -1.67
CTLA4P16410 AC073136.1-201ENST00000449426 2884 ntBASIC4.65□□□□□ -1.67
CTLA4P16410 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
CTLA4P16410 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
CTLA4P16410 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.65□□□□□ -1.67
CTLA4P16410 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
CTLA4P16410 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
CTLA4P16410 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
CTLA4P16410 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.64□□□□□ -1.67
CTLA4P16410 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CTLA4P16410 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CTLA4P16410 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CTLA4P16410 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CTLA4P16410 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.64□□□□□ -1.67
CTLA4P16410 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CTLA4P16410 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CTLA4P16410 RNU1-149P-201ENST00000390870 161 ntBASIC4.64□□□□□ -1.67
CTLA4P16410 SNORA17A-201ENST00000391185 133 ntBASIC4.64□□□□□ -1.67
CTLA4P16410 DPPA2P2-201ENST00000418220 897 ntBASIC4.64□□□□□ -1.67
CTLA4P16410 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.64□□□□□ -1.67
CTLA4P16410 AL133325.1-201ENST00000421090 382 ntBASIC4.64□□□□□ -1.67
CTLA4P16410 AL161722.2-201ENST00000434731 981 ntBASIC4.64□□□□□ -1.67
CTLA4P16410 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.64□□□□□ -1.67
CTLA4P16410 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.64□□□□□ -1.67
CTLA4P16410 RPS11P7-201ENST00000442125 465 ntBASIC4.64□□□□□ -1.67
CTLA4P16410 BX842559.2-201ENST00000451418 605 ntBASIC4.64□□□□□ -1.67
CTLA4P16410 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CTLA4P16410 AC021660.1-201ENST00000465006 554 ntBASIC4.64□□□□□ -1.67
CTLA4P16410 AC090589.1-201ENST00000473109 362 ntBASIC4.64□□□□□ -1.67
CTLA4P16410 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC4.64□□□□□ -1.67
CTLA4P16410 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CTLA4P16410 AC138832.1-201ENST00000522871 556 ntBASIC4.64□□□□□ -1.67
CTLA4P16410 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.64□□□□□ -1.67
CTLA4P16410 AC126177.5-201ENST00000549599 178 ntBASIC4.64□□□□□ -1.67
CTLA4P16410 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC4.64□□□□□ -1.67
CTLA4P16410 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC4.64□□□□□ -1.67
CTLA4P16410 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC4.64□□□□□ -1.67
CTLA4P16410 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CTLA4P16410 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC4.64□□□□□ -1.67
CTLA4P16410 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.64□□□□□ -1.67
CTLA4P16410 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CTLA4P16410 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms