Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 OR55B1P-203ENST00000641518 2602 ntBASIC6.29□□□□□ -1.4
TOP1P11387 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
TOP1P11387 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
TOP1P11387 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
TOP1P11387 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC6.29□□□□□ -1.4
TOP1P11387 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC6.29□□□□□ -1.4
TOP1P11387 ATP5A1P1-201ENST00000454088 1321 ntBASIC6.29□□□□□ -1.4
TOP1P11387 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
TOP1P11387 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
TOP1P11387 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC6.29□□□□□ -1.4
TOP1P11387 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
TOP1P11387 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC6.29□□□□□ -1.4
TOP1P11387 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC6.29□□□□□ -1.4
TOP1P11387 RNU1-149P-201ENST00000390870 161 ntBASIC6.29□□□□□ -1.4
TOP1P11387 U3.28-201ENST00000391249 210 ntBASIC6.29□□□□□ -1.4
TOP1P11387 CBX1P3-201ENST00000413296 527 ntBASIC6.29□□□□□ -1.4
TOP1P11387 AC093655.2-201ENST00000425735 631 ntBASIC6.29□□□□□ -1.4
TOP1P11387 AC009784.1-201ENST00000426484 460 ntBASIC6.29□□□□□ -1.4
TOP1P11387 AC245047.2-201ENST00000441060 530 ntBASIC6.29□□□□□ -1.4
TOP1P11387 RPS11P7-201ENST00000442125 465 ntBASIC6.29□□□□□ -1.4
TOP1P11387 AC079841.1-201ENST00000481228 950 ntBASIC6.29□□□□□ -1.4
TOP1P11387 RN7SL727P-201ENST00000482164 296 ntBASIC6.29□□□□□ -1.4
TOP1P11387 HIGD1AP14-201ENST00000507617 282 ntBASIC6.29□□□□□ -1.4
TOP1P11387 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC6.29□□□□□ -1.4
TOP1P11387 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC6.29□□□□□ -1.4
TOP1P11387 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC6.29□□□□□ -1.4
TOP1P11387 RNA5SP92-201ENST00000516437 110 ntBASIC6.29□□□□□ -1.4
TOP1P11387 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
TOP1P11387 OR8G3P-201ENST00000533406 921 ntBASIC6.29□□□□□ -1.4
TOP1P11387 AL353796.1-201ENST00000561542 3241 ntBASIC6.29□□□□□ -1.4
TOP1P11387 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
TOP1P11387 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC6.29□□□□□ -1.4
TOP1P11387 AC016839.1-201ENST00000578162 867 ntBASIC6.29□□□□□ -1.4
TOP1P11387 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
TOP1P11387 AC069307.1-201ENST00000602820 447 ntBASIC6.29□□□□□ -1.4
TOP1P11387 SDR42E1P1-201ENST00000611327 477 ntBASIC6.29□□□□□ -1.4
TOP1P11387 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC6.29□□□□□ -1.4
TOP1P11387 AL162574.1-201ENST00000615702 950 ntBASIC6.29□□□□□ -1.4
TOP1P11387 WWOX-217ENST00000620008 450 ntTSL 2 BASIC6.29□□□□□ -1.4
TOP1P11387 uc_338.7-201ENST00000621834 124 ntBASIC6.29□□□□□ -1.4
TOP1P11387 AL078621.3-201ENST00000623707 2042 ntBASIC6.29□□□□□ -1.4
TOP1P11387 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
TOP1P11387 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
TOP1P11387 AL360270.2-201ENST00000562952 5985 ntBASIC6.29□□□□□ -1.4
TOP1P11387 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
TOP1P11387 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
TOP1P11387 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC6.29□□□□□ -1.4
TOP1P11387 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
TOP1P11387 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC6.29□□□□□ -1.4
TOP1P11387 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
TOP1P11387 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TOP1P11387 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TOP1P11387 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
TOP1P11387 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC6.28□□□□□ -1.4
TOP1P11387 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC6.28□□□□□ -1.4
TOP1P11387 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TOP1P11387 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TOP1P11387 AC005005.4-201ENST00000623789 16698 ntBASIC6.28□□□□□ -1.4
TOP1P11387 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
TOP1P11387 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
TOP1P11387 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
TOP1P11387 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
TOP1P11387 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
TOP1P11387 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
TOP1P11387 PPIAP9-201ENST00000403866 498 ntBASIC6.28□□□□□ -1.4
TOP1P11387 RN7SKP278-201ENST00000410504 342 ntBASIC6.28□□□□□ -1.4
TOP1P11387 NDUFB4P8-201ENST00000435351 367 ntBASIC6.28□□□□□ -1.4
TOP1P11387 RPL5P25-201ENST00000441148 775 ntBASIC6.28□□□□□ -1.4
TOP1P11387 MYO5BP2-201ENST00000449815 1277 ntBASIC6.28□□□□□ -1.4
TOP1P11387 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC6.28□□□□□ -1.4
TOP1P11387 AC012123.2-201ENST00000485809 248 ntBASIC6.28□□□□□ -1.4
TOP1P11387 AC072052.1-201ENST00000496556 306 ntBASIC6.28□□□□□ -1.4
TOP1P11387 AC006499.3-201ENST00000506077 748 ntBASIC6.28□□□□□ -1.4
TOP1P11387 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC6.28□□□□□ -1.4
TOP1P11387 SCARNA20.4-201ENST00000516969 131 ntBASIC6.28□□□□□ -1.4
TOP1P11387 YWHABP2-201ENST00000540201 713 ntBASIC6.28□□□□□ -1.4
TOP1P11387 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
TOP1P11387 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC6.28□□□□□ -1.4
TOP1P11387 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC6.28□□□□□ -1.4
TOP1P11387 NMNAT1P5-201ENST00000559657 841 ntBASIC6.28□□□□□ -1.4
TOP1P11387 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC6.28□□□□□ -1.4
TOP1P11387 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
TOP1P11387 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TOP1P11387 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
TOP1P11387 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
TOP1P11387 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
TOP1P11387 AP000473.2-201ENST00000602659 1537 ntBASIC6.28□□□□□ -1.4
TOP1P11387 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC6.28□□□□□ -1.4
TOP1P11387 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC6.28□□□□□ -1.4
TOP1P11387 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TOP1P11387 AC004158.1-201ENST00000564508 4319 ntBASIC6.28□□□□□ -1.4
TOP1P11387 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
TOP1P11387 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
TOP1P11387 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
TOP1P11387 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC6.27□□□□□ -1.41
TOP1P11387 AL139148.1-201ENST00000427122 680 ntBASIC6.27□□□□□ -1.41
TOP1P11387 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC6.27□□□□□ -1.41
TOP1P11387 UBE2V2P4-201ENST00000447495 259 ntBASIC6.27□□□□□ -1.41
TOP1P11387 TSACC-207ENST00000470342 601 ntTSL 2 BASIC6.27□□□□□ -1.41
TOP1P11387 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms