Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 CCRL2-201ENST00000357392 1593 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
CSB-PGBD3P0DP91 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC8.56□□□□□ -1.04
CSB-PGBD3P0DP91 AC112255.1-201ENST00000624070 2493 ntBASIC8.56□□□□□ -1.04
CSB-PGBD3P0DP91 AL359922.2-201ENST00000581788 3017 ntBASIC8.56□□□□□ -1.04
CSB-PGBD3P0DP91 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CSB-PGBD3P0DP91 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
CSB-PGBD3P0DP91 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
CSB-PGBD3P0DP91 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC8.55□□□□□ -1.04
CSB-PGBD3P0DP91 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
CSB-PGBD3P0DP91 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
CSB-PGBD3P0DP91 AC125238.2-201ENST00000430003 1440 ntBASIC8.55□□□□□ -1.04
CSB-PGBD3P0DP91 MTCO1P18-201ENST00000455518 1419 ntBASIC8.55□□□□□ -1.04
CSB-PGBD3P0DP91 AC015871.3-201ENST00000618835 2261 ntBASIC8.55□□□□□ -1.04
CSB-PGBD3P0DP91 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC8.55□□□□□ -1.04
CSB-PGBD3P0DP91 AC073342.2-201ENST00000595842 1800 ntBASIC8.55□□□□□ -1.04
CSB-PGBD3P0DP91 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
CSB-PGBD3P0DP91 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
CSB-PGBD3P0DP91 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
CSB-PGBD3P0DP91 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC8.55□□□□□ -1.04
CSB-PGBD3P0DP91 RNA5SP110-201ENST00000362638 115 ntBASIC8.55□□□□□ -1.04
CSB-PGBD3P0DP91 SNORD16-201ENST00000362803 99 ntBASIC8.55□□□□□ -1.04
CSB-PGBD3P0DP91 RNU5A-2P-201ENST00000384337 116 ntBASIC8.55□□□□□ -1.04
CSB-PGBD3P0DP91 CHMP1B2P-201ENST00000399581 597 ntBASIC8.55□□□□□ -1.04
CSB-PGBD3P0DP91 RN7SKP144-201ENST00000411108 279 ntBASIC8.55□□□□□ -1.04
CSB-PGBD3P0DP91 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC8.55□□□□□ -1.04
CSB-PGBD3P0DP91 RPS7P9-201ENST00000414704 586 ntBASIC8.55□□□□□ -1.04
CSB-PGBD3P0DP91 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC8.55□□□□□ -1.04
CSB-PGBD3P0DP91 OR6C64P-201ENST00000419708 825 ntBASIC8.55□□□□□ -1.04
CSB-PGBD3P0DP91 RPL23AP85-201ENST00000421838 433 ntBASIC8.55□□□□□ -1.04
CSB-PGBD3P0DP91 RPF2P1-201ENST00000424137 906 ntBASIC8.55□□□□□ -1.04
CSB-PGBD3P0DP91 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC8.55□□□□□ -1.04
CSB-PGBD3P0DP91 MTCO1P52-201ENST00000433928 531 ntBASIC8.55□□□□□ -1.04
CSB-PGBD3P0DP91 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC8.55□□□□□ -1.04
CSB-PGBD3P0DP91 RPL23AP19-201ENST00000436229 369 ntBASIC8.55□□□□□ -1.04
CSB-PGBD3P0DP91 AL353662.1-201ENST00000439099 327 ntBASIC8.55□□□□□ -1.04
CSB-PGBD3P0DP91 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC8.55□□□□□ -1.04
CSB-PGBD3P0DP91 OR4D12P-201ENST00000509361 911 ntBASIC8.55□□□□□ -1.04
CSB-PGBD3P0DP91 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC8.55□□□□□ -1.04
CSB-PGBD3P0DP91 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC8.55□□□□□ -1.04
CSB-PGBD3P0DP91 SNORD46.2-201ENST00000516021 102 ntBASIC8.55□□□□□ -1.04
CSB-PGBD3P0DP91 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC8.55□□□□□ -1.04
CSB-PGBD3P0DP91 OR9L1P-201ENST00000529493 933 ntBASIC8.55□□□□□ -1.04
CSB-PGBD3P0DP91 AC124293.1-201ENST00000530034 493 ntBASIC8.55□□□□□ -1.04
CSB-PGBD3P0DP91 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC8.55□□□□□ -1.04
CSB-PGBD3P0DP91 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC8.55□□□□□ -1.04
CSB-PGBD3P0DP91 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC8.55□□□□□ -1.04
CSB-PGBD3P0DP91 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC8.55□□□□□ -1.04
CSB-PGBD3P0DP91 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC8.55□□□□□ -1.04
CSB-PGBD3P0DP91 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC8.55□□□□□ -1.04
CSB-PGBD3P0DP91 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC8.55□□□□□ -1.04
CSB-PGBD3P0DP91 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC8.55□□□□□ -1.04
CSB-PGBD3P0DP91 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC8.55□□□□□ -1.04
CSB-PGBD3P0DP91 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
CSB-PGBD3P0DP91 AL031985.2-201ENST00000600955 480 ntBASIC8.55□□□□□ -1.04
CSB-PGBD3P0DP91 AP001330.5-201ENST00000607176 411 ntBASIC8.55□□□□□ -1.04
CSB-PGBD3P0DP91 AL450489.1-201ENST00000612071 468 ntBASIC8.55□□□□□ -1.04
CSB-PGBD3P0DP91 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC8.55□□□□□ -1.04
CSB-PGBD3P0DP91 MRPL57P1-201ENST00000621486 265 ntBASIC8.55□□□□□ -1.04
CSB-PGBD3P0DP91 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
CSB-PGBD3P0DP91 AC017007.4-201ENST00000503353 1352 ntBASIC8.55□□□□□ -1.04
CSB-PGBD3P0DP91 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC8.55□□□□□ -1.04
CSB-PGBD3P0DP91 MUM1L1-201ENST00000337685 4308 ntAPPRIS P1 TSL 3 BASIC8.55□□□□□ -1.04
CSB-PGBD3P0DP91 CR848007.1-201ENST00000442354 1699 ntBASIC8.55□□□□□ -1.04
CSB-PGBD3P0DP91 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
CSB-PGBD3P0DP91 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
CSB-PGBD3P0DP91 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
CSB-PGBD3P0DP91 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
CSB-PGBD3P0DP91 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC8.54□□□□□ -1.04
CSB-PGBD3P0DP91 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
CSB-PGBD3P0DP91 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC8.54□□□□□ -1.04
CSB-PGBD3P0DP91 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC8.54□□□□□ -1.04
CSB-PGBD3P0DP91 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
CSB-PGBD3P0DP91 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
CSB-PGBD3P0DP91 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC8.54□□□□□ -1.04
CSB-PGBD3P0DP91 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
CSB-PGBD3P0DP91 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC8.54□□□□□ -1.04
CSB-PGBD3P0DP91 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
CSB-PGBD3P0DP91 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
CSB-PGBD3P0DP91 UMAD1-206ENST00000636849 2157 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
CSB-PGBD3P0DP91 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
CSB-PGBD3P0DP91 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
CSB-PGBD3P0DP91 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
CSB-PGBD3P0DP91 AC009948.3-201ENST00000603415 1798 ntBASIC8.54□□□□□ -1.04
CSB-PGBD3P0DP91 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC8.54□□□□□ -1.04
CSB-PGBD3P0DP91 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
CSB-PGBD3P0DP91 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
CSB-PGBD3P0DP91 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
CSB-PGBD3P0DP91 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
CSB-PGBD3P0DP91 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
CSB-PGBD3P0DP91 MTCO1P56-201ENST00000401674 224 ntBASIC8.54□□□□□ -1.04
CSB-PGBD3P0DP91 RPS3AP24-201ENST00000407896 734 ntBASIC8.54□□□□□ -1.04
CSB-PGBD3P0DP91 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
CSB-PGBD3P0DP91 AC010385.1-201ENST00000412374 256 ntBASIC8.54□□□□□ -1.04
CSB-PGBD3P0DP91 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC8.54□□□□□ -1.04
CSB-PGBD3P0DP91 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC8.54□□□□□ -1.04
CSB-PGBD3P0DP91 AC079355.1-201ENST00000421770 223 ntBASIC8.54□□□□□ -1.04
CSB-PGBD3P0DP91 MTND4P20-201ENST00000424125 869 ntBASIC8.54□□□□□ -1.04
CSB-PGBD3P0DP91 AC003989.1-201ENST00000434569 565 ntBASIC8.54□□□□□ -1.04
CSB-PGBD3P0DP91 AC023141.3-201ENST00000436698 278 ntBASIC8.54□□□□□ -1.04
CSB-PGBD3P0DP91 RPS24P1-201ENST00000438550 371 ntBASIC8.54□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms