Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC7.15□□□□□ -1.26
HMGB1P09429 GAPDHP59-201ENST00000435908 267 ntBASIC7.15□□□□□ -1.26
HMGB1P09429 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC7.15□□□□□ -1.26
HMGB1P09429 H3F3BP1-201ENST00000440551 403 ntBASIC7.15□□□□□ -1.26
HMGB1P09429 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC7.15□□□□□ -1.26
HMGB1P09429 ZNF619P1-201ENST00000446539 752 ntBASIC7.15□□□□□ -1.26
HMGB1P09429 FTLP8-201ENST00000446770 267 ntBASIC7.15□□□□□ -1.26
HMGB1P09429 HMGB1P7-201ENST00000450921 612 ntBASIC7.15□□□□□ -1.26
HMGB1P09429 RPL37P3-201ENST00000456825 293 ntBASIC7.15□□□□□ -1.26
HMGB1P09429 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC7.15□□□□□ -1.26
HMGB1P09429 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC7.15□□□□□ -1.26
HMGB1P09429 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC7.15□□□□□ -1.26
HMGB1P09429 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC7.15□□□□□ -1.26
HMGB1P09429 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC7.15□□□□□ -1.26
HMGB1P09429 UBTFL9-201ENST00000534504 1148 ntBASIC7.15□□□□□ -1.26
HMGB1P09429 AC244502.2-201ENST00000543361 851 ntBASIC7.15□□□□□ -1.26
HMGB1P09429 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC7.15□□□□□ -1.26
HMGB1P09429 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC7.15□□□□□ -1.26
HMGB1P09429 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC7.15□□□□□ -1.26
HMGB1P09429 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC7.15□□□□□ -1.26
HMGB1P09429 MRPS21P8-201ENST00000569196 235 ntBASIC7.15□□□□□ -1.26
HMGB1P09429 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC7.15□□□□□ -1.26
HMGB1P09429 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC7.15□□□□□ -1.26
HMGB1P09429 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC7.15□□□□□ -1.26
HMGB1P09429 RMST_10.1-201ENST00000616309 154 ntBASIC7.15□□□□□ -1.26
HMGB1P09429 RFPL4AP6-201ENST00000616792 846 ntBASIC7.15□□□□□ -1.26
HMGB1P09429 FAM27E2-201ENST00000619668 403 ntBASIC7.15□□□□□ -1.26
HMGB1P09429 AP003072.4-201ENST00000624580 310 ntBASIC7.15□□□□□ -1.26
HMGB1P09429 TEX41-293ENST00000630451 690 ntTSL 5 BASIC7.15□□□□□ -1.26
HMGB1P09429 UBA3-213ENST00000631029 123 ntTSL 5 BASIC7.15□□□□□ -1.26
HMGB1P09429 CASC19-222ENST00000641321 1173 ntBASIC7.15□□□□□ -1.26
HMGB1P09429 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
HMGB1P09429 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
HMGB1P09429 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
HMGB1P09429 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC7.15□□□□□ -1.26
HMGB1P09429 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC7.15□□□□□ -1.27
HMGB1P09429 MTCO1P18-201ENST00000455518 1419 ntBASIC7.15□□□□□ -1.27
HMGB1P09429 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.27
HMGB1P09429 HSPA8P19-201ENST00000505359 1517 ntBASIC7.15□□□□□ -1.27
HMGB1P09429 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC7.15□□□□□ -1.27
HMGB1P09429 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
HMGB1P09429 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC7.15□□□□□ -1.27
HMGB1P09429 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
HMGB1P09429 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
HMGB1P09429 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
HMGB1P09429 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
HMGB1P09429 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
HMGB1P09429 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
HMGB1P09429 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
HMGB1P09429 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
HMGB1P09429 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC7.14□□□□□ -1.27
HMGB1P09429 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC7.14□□□□□ -1.27
HMGB1P09429 OR10R3P-201ENST00000361688 942 ntBASIC7.14□□□□□ -1.27
HMGB1P09429 RNA5SP110-201ENST00000362638 115 ntBASIC7.14□□□□□ -1.27
HMGB1P09429 RNU1-134P-201ENST00000362935 165 ntBASIC7.14□□□□□ -1.27
HMGB1P09429 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
HMGB1P09429 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
HMGB1P09429 RBMY1HP-201ENST00000382759 1389 ntBASIC7.14□□□□□ -1.27
HMGB1P09429 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
HMGB1P09429 RBBP4P5-201ENST00000398583 1266 ntBASIC7.14□□□□□ -1.27
HMGB1P09429 AL132875.1-201ENST00000403623 949 ntBASIC7.14□□□□□ -1.27
HMGB1P09429 DDX18P3-201ENST00000404856 2007 ntBASIC7.14□□□□□ -1.27
HMGB1P09429 RN7SKP247-201ENST00000411094 308 ntBASIC7.14□□□□□ -1.27
HMGB1P09429 SETP15-201ENST00000412724 337 ntBASIC7.14□□□□□ -1.27
HMGB1P09429 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC7.14□□□□□ -1.27
HMGB1P09429 NIFKP3-201ENST00000417799 865 ntBASIC7.14□□□□□ -1.27
HMGB1P09429 AL138785.1-201ENST00000425821 331 ntBASIC7.14□□□□□ -1.27
HMGB1P09429 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
HMGB1P09429 AL512661.1-201ENST00000434586 1253 ntBASIC7.14□□□□□ -1.27
HMGB1P09429 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
HMGB1P09429 AP000281.1-201ENST00000444036 316 ntBASIC7.14□□□□□ -1.27
HMGB1P09429 IFNWP4-201ENST00000453148 294 ntBASIC7.14□□□□□ -1.27
HMGB1P09429 PPIAP7-201ENST00000454070 489 ntBASIC7.14□□□□□ -1.27
HMGB1P09429 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC7.14□□□□□ -1.27
HMGB1P09429 CST12P-201ENST00000457644 362 ntBASIC7.14□□□□□ -1.27
HMGB1P09429 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC7.14□□□□□ -1.27
HMGB1P09429 AC091874.2-201ENST00000505889 720 ntBASIC7.14□□□□□ -1.27
HMGB1P09429 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC7.14□□□□□ -1.27
HMGB1P09429 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC7.14□□□□□ -1.27
HMGB1P09429 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC7.14□□□□□ -1.27
HMGB1P09429 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC7.14□□□□□ -1.27
HMGB1P09429 AP000620.1-201ENST00000527147 504 ntBASIC7.14□□□□□ -1.27
HMGB1P09429 AC123769.1-201ENST00000530992 3192 ntBASIC7.14□□□□□ -1.27
HMGB1P09429 OR11H3P-201ENST00000554547 982 ntBASIC7.14□□□□□ -1.27
HMGB1P09429 AC090751.1-201ENST00000566966 267 ntBASIC7.14□□□□□ -1.27
HMGB1P09429 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC7.14□□□□□ -1.27
HMGB1P09429 AC011477.5-201ENST00000586571 259 ntBASIC7.14□□□□□ -1.27
HMGB1P09429 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC7.14□□□□□ -1.27
HMGB1P09429 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC7.14□□□□□ -1.27
HMGB1P09429 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC7.14□□□□□ -1.27
HMGB1P09429 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC7.14□□□□□ -1.27
HMGB1P09429 AL139407.1-201ENST00000613826 1175 ntBASIC7.14□□□□□ -1.27
HMGB1P09429 AL603750.1-201ENST00000624216 1717 ntBASIC7.14□□□□□ -1.27
HMGB1P09429 AC092162.3-201ENST00000624511 1624 ntBASIC7.14□□□□□ -1.27
HMGB1P09429 AL357562.1-201ENST00000624911 609 ntBASIC7.14□□□□□ -1.27
HMGB1P09429 AC073488.6-201ENST00000632293 754 ntBASIC7.14□□□□□ -1.27
HMGB1P09429 CFTRP2-201ENST00000634304 199 ntBASIC7.14□□□□□ -1.27
HMGB1P09429 U6.107-201ENST00000637108 79 ntBASIC7.14□□□□□ -1.27
HMGB1P09429 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
HMGB1P09429 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms