Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.61□□□□□ -1.51
RETP07949 AC012616.1-201ENST00000600294 197 ntBASIC5.61□□□□□ -1.51
RETP07949 AL133481.2-203ENST00000607558 139 ntBASIC5.61□□□□□ -1.51
RETP07949 AC000068.2-201ENST00000608816 460 ntBASIC5.61□□□□□ -1.51
RETP07949 AC005618.4-201ENST00000625053 554 ntBASIC5.61□□□□□ -1.51
RETP07949 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
RETP07949 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RETP07949 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
RETP07949 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.61□□□□□ -1.51
RETP07949 OR9K1P-202ENST00000641111 3217 ntBASIC5.61□□□□□ -1.51
RETP07949 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RETP07949 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RETP07949 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RETP07949 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.6□□□□□ -1.51
RETP07949 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RETP07949 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RETP07949 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RETP07949 RNA5SP335-201ENST00000363817 110 ntBASIC5.6□□□□□ -1.51
RETP07949 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
RETP07949 AC002524.1-201ENST00000411687 547 ntBASIC5.6□□□□□ -1.51
RETP07949 NENFP1-201ENST00000419476 466 ntBASIC5.6□□□□□ -1.51
RETP07949 AC245028.1-201ENST00000423259 256 ntBASIC5.6□□□□□ -1.51
RETP07949 AC099670.2-201ENST00000435130 321 ntBASIC5.6□□□□□ -1.51
RETP07949 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.6□□□□□ -1.51
RETP07949 NDUFAF4P3-201ENST00000456468 525 ntBASIC5.6□□□□□ -1.51
RETP07949 AL603882.1-201ENST00000463059 681 ntBASIC5.6□□□□□ -1.51
RETP07949 AC083982.1-201ENST00000485679 344 ntBASIC5.6□□□□□ -1.51
RETP07949 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.6□□□□□ -1.51
RETP07949 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.6□□□□□ -1.51
RETP07949 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.6□□□□□ -1.51
RETP07949 AC019322.1-201ENST00000571869 389 ntBASIC5.6□□□□□ -1.51
RETP07949 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.6□□□□□ -1.51
RETP07949 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RETP07949 FAM25E-202ENST00000608562 189 ntBASIC5.6□□□□□ -1.51
RETP07949 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RETP07949 AC015712.7-201ENST00000615211 635 ntBASIC5.6□□□□□ -1.51
RETP07949 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.6□□□□□ -1.51
RETP07949 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RETP07949 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
RETP07949 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.6□□□□□ -1.51
RETP07949 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.6□□□□□ -1.51
RETP07949 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RETP07949 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.6□□□□□ -1.51
RETP07949 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
RETP07949 AL034546.1-201ENST00000623740 3693 ntBASIC5.6□□□□□ -1.51
RETP07949 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.6□□□□□ -1.51
RETP07949 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.6□□□□□ -1.51
RETP07949 HSPD1P7-201ENST00000447985 1686 ntBASIC5.59□□□□□ -1.51
RETP07949 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RETP07949 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RETP07949 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RETP07949 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.59□□□□□ -1.51
RETP07949 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
RETP07949 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
RETP07949 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.59□□□□□ -1.51
RETP07949 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RETP07949 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
RETP07949 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
RETP07949 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RETP07949 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RETP07949 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RETP07949 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
RETP07949 SNORA67-201ENST00000384423 137 ntBASIC5.59□□□□□ -1.51
RETP07949 AL356967.1-201ENST00000406305 431 ntBASIC5.59□□□□□ -1.51
RETP07949 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.59□□□□□ -1.51
RETP07949 NIFKP3-201ENST00000417799 865 ntBASIC5.59□□□□□ -1.51
RETP07949 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.59□□□□□ -1.51
RETP07949 CRIP1P1-201ENST00000427567 185 ntBASIC5.59□□□□□ -1.51
RETP07949 FAM96AP1-201ENST00000430879 482 ntBASIC5.59□□□□□ -1.51
RETP07949 AC096775.1-201ENST00000437724 448 ntBASIC5.59□□□□□ -1.51
RETP07949 RPL12P39-201ENST00000455456 496 ntBASIC5.59□□□□□ -1.51
RETP07949 AC073610.1-201ENST00000489971 396 ntBASIC5.59□□□□□ -1.51
RETP07949 RPEP1-201ENST00000504507 658 ntBASIC5.59□□□□□ -1.51
RETP07949 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.59□□□□□ -1.51
RETP07949 BRD9P1-201ENST00000529855 560 ntBASIC5.59□□□□□ -1.51
RETP07949 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.59□□□□□ -1.51
RETP07949 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RETP07949 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.59□□□□□ -1.51
RETP07949 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.59□□□□□ -1.51
RETP07949 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.59□□□□□ -1.51
RETP07949 MIR3934-201ENST00000579806 107 ntBASIC5.59□□□□□ -1.51
RETP07949 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.59□□□□□ -1.51
RETP07949 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.59□□□□□ -1.51
RETP07949 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.59□□□□□ -1.51
RETP07949 AC091953.3-201ENST00000623220 236 ntBASIC5.59□□□□□ -1.51
RETP07949 AC099654.6-201ENST00000636487 512 ntBASIC5.59□□□□□ -1.51
RETP07949 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
RETP07949 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
RETP07949 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RETP07949 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RETP07949 OR4G1P-202ENST00000641173 1788 ntBASIC5.59□□□□□ -1.51
RETP07949 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
RETP07949 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
RETP07949 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
RETP07949 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
RETP07949 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.59□□□□□ -1.52
RETP07949 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
RETP07949 AC011493.1-201ENST00000596753 1632 ntBASIC5.59□□□□□ -1.52
RETP07949 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
RETP07949 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms