Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 NPM1P29-201ENST00000483112 803 ntBASIC4.53□□□□□ -1.68
CD74P04233 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.53□□□□□ -1.68
CD74P04233 RN7SL193P-201ENST00000491708 276 ntBASIC4.53□□□□□ -1.68
CD74P04233 OR2A3P-201ENST00000493774 953 ntBASIC4.53□□□□□ -1.68
CD74P04233 AC090638.1-201ENST00000498296 909 ntBASIC4.53□□□□□ -1.68
CD74P04233 AC112484.3-201ENST00000505910 329 ntBASIC4.53□□□□□ -1.68
CD74P04233 RNA5SP441-201ENST00000516809 88 ntBASIC4.53□□□□□ -1.68
CD74P04233 AC011853.1-201ENST00000518911 454 ntBASIC4.53□□□□□ -1.68
CD74P04233 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC4.53□□□□□ -1.68
CD74P04233 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.53□□□□□ -1.68
CD74P04233 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
CD74P04233 AC084759.1-201ENST00000561168 290 ntBASIC4.53□□□□□ -1.68
CD74P04233 AC134669.1-201ENST00000581275 672 ntBASIC4.53□□□□□ -1.68
CD74P04233 RN7SL356P-201ENST00000582228 248 ntBASIC4.53□□□□□ -1.68
CD74P04233 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.53□□□□□ -1.68
CD74P04233 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC4.53□□□□□ -1.68
CD74P04233 AC092266.1-201ENST00000610958 165 ntBASIC4.53□□□□□ -1.68
CD74P04233 MIR6778-201ENST00000617912 73 ntBASIC4.53□□□□□ -1.68
CD74P04233 AC015914.2-201ENST00000618167 288 ntBASIC4.53□□□□□ -1.68
CD74P04233 AC022106.2-201ENST00000620114 757 ntBASIC4.53□□□□□ -1.68
CD74P04233 MIR1910-201ENST00000636955 80 ntBASIC4.53□□□□□ -1.68
CD74P04233 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
CD74P04233 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.53□□□□□ -1.68
CD74P04233 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.53□□□□□ -1.68
CD74P04233 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CD74P04233 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.53□□□□□ -1.68
CD74P04233 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CD74P04233 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CD74P04233 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CD74P04233 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CD74P04233 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.52□□□□□ -1.69
CD74P04233 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CD74P04233 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
CD74P04233 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
CD74P04233 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CD74P04233 RPS3AP2-201ENST00000407190 754 ntBASIC4.52□□□□□ -1.69
CD74P04233 MARK2P12-201ENST00000420129 585 ntBASIC4.52□□□□□ -1.69
CD74P04233 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.52□□□□□ -1.69
CD74P04233 AC012519.1-201ENST00000424588 610 ntBASIC4.52□□□□□ -1.69
CD74P04233 NPM1P22-201ENST00000427761 952 ntBASIC4.52□□□□□ -1.69
CD74P04233 GAPDHP59-201ENST00000435908 267 ntBASIC4.52□□□□□ -1.69
CD74P04233 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.52□□□□□ -1.69
CD74P04233 RPL12P11-201ENST00000439970 501 ntBASIC4.52□□□□□ -1.69
CD74P04233 SNRPFP2-201ENST00000440710 251 ntBASIC4.52□□□□□ -1.69
CD74P04233 RPL6P30-201ENST00000443382 862 ntBASIC4.52□□□□□ -1.69
CD74P04233 RPL5P7-201ENST00000444235 813 ntBASIC4.52□□□□□ -1.69
CD74P04233 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC4.52□□□□□ -1.69
CD74P04233 AL591623.2-201ENST00000449978 222 ntBASIC4.52□□□□□ -1.69
CD74P04233 AC002553.2-201ENST00000453217 340 ntBASIC4.52□□□□□ -1.69
CD74P04233 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC4.52□□□□□ -1.69
CD74P04233 AC239798.3-201ENST00000454459 408 ntBASIC4.52□□□□□ -1.69
CD74P04233 AC098847.1-201ENST00000473094 348 ntBASIC4.52□□□□□ -1.69
CD74P04233 AC022215.1-201ENST00000481770 362 ntBASIC4.52□□□□□ -1.69
CD74P04233 RPL7P41-201ENST00000485823 957 ntBASIC4.52□□□□□ -1.69
CD74P04233 AC021006.1-201ENST00000489849 553 ntBASIC4.52□□□□□ -1.69
CD74P04233 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CD74P04233 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC4.52□□□□□ -1.69
CD74P04233 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.52□□□□□ -1.69
CD74P04233 HSD3BP3-201ENST00000514706 994 ntBASIC4.52□□□□□ -1.69
CD74P04233 RN7SKP5-201ENST00000517045 272 ntBASIC4.52□□□□□ -1.69
CD74P04233 RN7SKP35-201ENST00000517210 151 ntBASIC4.52□□□□□ -1.69
CD74P04233 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.52□□□□□ -1.69
CD74P04233 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.52□□□□□ -1.69
CD74P04233 BNIP3P1-201ENST00000547295 580 ntBASIC4.52□□□□□ -1.69
CD74P04233 DCN-210ENST00000547568 823 ntTSL 3 BASIC4.52□□□□□ -1.69
CD74P04233 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC4.52□□□□□ -1.69
CD74P04233 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC4.52□□□□□ -1.69
CD74P04233 AC002519.2-203ENST00000567043 837 ntBASIC4.52□□□□□ -1.69
CD74P04233 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.52□□□□□ -1.69
CD74P04233 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
CD74P04233 AP005403.1-201ENST00000579720 229 ntBASIC4.52□□□□□ -1.69
CD74P04233 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC4.52□□□□□ -1.69
CD74P04233 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CD74P04233 AP002884.5-201ENST00000595053 1132 ntBASIC4.52□□□□□ -1.69
CD74P04233 CDC42EP3P1-201ENST00000601004 764 ntBASIC4.52□□□□□ -1.69
CD74P04233 FAM27E4-201ENST00000605259 342 ntBASIC4.52□□□□□ -1.69
CD74P04233 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CD74P04233 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.52□□□□□ -1.69
CD74P04233 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC4.52□□□□□ -1.69
CD74P04233 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.52□□□□□ -1.69
CD74P04233 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC4.52□□□□□ -1.69
CD74P04233 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
CD74P04233 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
CD74P04233 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CD74P04233 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CD74P04233 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.52□□□□□ -1.69
CD74P04233 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CD74P04233 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CD74P04233 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
CD74P04233 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CD74P04233 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.51□□□□□ -1.69
CD74P04233 AC006210.2-201ENST00000367074 1545 ntBASIC4.51□□□□□ -1.69
CD74P04233 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CD74P04233 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
CD74P04233 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CD74P04233 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
CD74P04233 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
CD74P04233 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC4.51□□□□□ -1.69
CD74P04233 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CD74P04233 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms