Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.48□□□□□ -1.53
LDLRP01130 AL691477.1-201ENST00000624398 162 ntBASIC5.48□□□□□ -1.53
LDLRP01130 AL356094.1-201ENST00000624663 1212 ntBASIC5.48□□□□□ -1.53
LDLRP01130 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.48□□□□□ -1.53
LDLRP01130 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
LDLRP01130 AC007938.2-201ENST00000604666 2634 ntBASIC5.48□□□□□ -1.53
LDLRP01130 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.48□□□□□ -1.53
LDLRP01130 NAMPTP1-201ENST00000440465 2514 ntBASIC5.48□□□□□ -1.53
LDLRP01130 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
LDLRP01130 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.48□□□□□ -1.53
LDLRP01130 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
LDLRP01130 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
LDLRP01130 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.48□□□□□ -1.53
LDLRP01130 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.48□□□□□ -1.53
LDLRP01130 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.48□□□□□ -1.53
LDLRP01130 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
LDLRP01130 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.48□□□□□ -1.53
LDLRP01130 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
LDLRP01130 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.47□□□□□ -1.53
LDLRP01130 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
LDLRP01130 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
LDLRP01130 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.47□□□□□ -1.53
LDLRP01130 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.47□□□□□ -1.53
LDLRP01130 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
LDLRP01130 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
LDLRP01130 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.47□□□□□ -1.53
LDLRP01130 MFSD8-239ENST00000641590 2479 ntBASIC5.47□□□□□ -1.53
LDLRP01130 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
LDLRP01130 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
LDLRP01130 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.47□□□□□ -1.53
LDLRP01130 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
LDLRP01130 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.47□□□□□ -1.53
LDLRP01130 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.47□□□□□ -1.53
LDLRP01130 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.47□□□□□ -1.53
LDLRP01130 RNU6-152P-201ENST00000384037 107 ntBASIC5.47□□□□□ -1.53
LDLRP01130 SNORA70-201ENST00000384436 135 ntBASIC5.47□□□□□ -1.53
LDLRP01130 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
LDLRP01130 OR7E101P-201ENST00000400428 513 ntBASIC5.47□□□□□ -1.53
LDLRP01130 AC136624.1-201ENST00000400791 413 ntBASIC5.47□□□□□ -1.53
LDLRP01130 OR1F12-201ENST00000402365 945 ntBASIC5.47□□□□□ -1.53
LDLRP01130 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.47□□□□□ -1.53
LDLRP01130 Y_RNA.625-201ENST00000411256 107 ntBASIC5.47□□□□□ -1.53
LDLRP01130 AC098592.2-201ENST00000413158 265 ntBASIC5.47□□□□□ -1.53
LDLRP01130 NPM1P4-201ENST00000414095 812 ntBASIC5.47□□□□□ -1.53
LDLRP01130 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.47□□□□□ -1.53
LDLRP01130 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.47□□□□□ -1.53
LDLRP01130 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.47□□□□□ -1.53
LDLRP01130 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.47□□□□□ -1.53
LDLRP01130 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.47□□□□□ -1.53
LDLRP01130 PTMAP6-201ENST00000439110 327 ntBASIC5.47□□□□□ -1.53
LDLRP01130 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.47□□□□□ -1.53
LDLRP01130 MTCO3P43-201ENST00000440974 771 ntBASIC5.47□□□□□ -1.53
LDLRP01130 AL606490.8-201ENST00000441624 319 ntBASIC5.47□□□□□ -1.53
LDLRP01130 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.47□□□□□ -1.53
LDLRP01130 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC5.47□□□□□ -1.53
LDLRP01130 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.47□□□□□ -1.53
LDLRP01130 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC5.47□□□□□ -1.53
LDLRP01130 OR5M14P-201ENST00000506803 618 ntBASIC5.47□□□□□ -1.53
LDLRP01130 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.47□□□□□ -1.53
LDLRP01130 NPM1P52-201ENST00000518264 846 ntBASIC5.47□□□□□ -1.53
LDLRP01130 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.47□□□□□ -1.53
LDLRP01130 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.47□□□□□ -1.53
LDLRP01130 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.47□□□□□ -1.53
LDLRP01130 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.47□□□□□ -1.53
LDLRP01130 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.47□□□□□ -1.53
LDLRP01130 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.47□□□□□ -1.53
LDLRP01130 AP001496.3-201ENST00000580230 913 ntBASIC5.47□□□□□ -1.53
LDLRP01130 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
LDLRP01130 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
LDLRP01130 AC092474.3-201ENST00000603022 568 ntBASIC5.47□□□□□ -1.53
LDLRP01130 AC073111.2-201ENST00000605657 1075 ntBASIC5.47□□□□□ -1.53
LDLRP01130 AC015802.5-201ENST00000607478 399 ntBASIC5.47□□□□□ -1.53
LDLRP01130 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
LDLRP01130 AL162233.1-201ENST00000620014 944 ntBASIC5.47□□□□□ -1.53
LDLRP01130 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.47□□□□□ -1.53
LDLRP01130 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
LDLRP01130 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
LDLRP01130 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
LDLRP01130 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
LDLRP01130 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
LDLRP01130 FBXL21-201ENST00000297158 1305 ntBASIC5.47□□□□□ -1.53
LDLRP01130 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.47□□□□□ -1.53
LDLRP01130 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
LDLRP01130 UGT2B24P-201ENST00000514441 1597 ntBASIC5.46□□□□□ -1.53
LDLRP01130 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.46□□□□□ -1.54
LDLRP01130 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.46□□□□□ -1.54
LDLRP01130 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
LDLRP01130 AC119674.1-202ENST00000641333 1860 ntBASIC5.46□□□□□ -1.54
LDLRP01130 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
LDLRP01130 AP000568.1-201ENST00000282964 442 ntBASIC5.46□□□□□ -1.54
LDLRP01130 GAPDHP24-201ENST00000328713 983 ntBASIC5.46□□□□□ -1.54
LDLRP01130 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
LDLRP01130 AL589655.1-201ENST00000405398 482 ntBASIC5.46□□□□□ -1.54
LDLRP01130 AL358178.1-201ENST00000407698 397 ntBASIC5.46□□□□□ -1.54
LDLRP01130 AL354890.1-201ENST00000413730 346 ntBASIC5.46□□□□□ -1.54
LDLRP01130 AC002504.1-201ENST00000438281 691 ntBASIC5.46□□□□□ -1.54
LDLRP01130 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
LDLRP01130 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC5.46□□□□□ -1.54
LDLRP01130 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.46□□□□□ -1.54
LDLRP01130 MORF4L1P4-201ENST00000450245 976 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms