Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.18□□□□□ -1.58
CLDN9O95484 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.18□□□□□ -1.58
CLDN9O95484 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.18□□□□□ -1.58
CLDN9O95484 PPIAP20-201ENST00000449839 135 ntBASIC5.18□□□□□ -1.58
CLDN9O95484 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.18□□□□□ -1.58
CLDN9O95484 OR2AF1P-201ENST00000454899 889 ntBASIC5.18□□□□□ -1.58
CLDN9O95484 RN7SL51P-201ENST00000468230 285 ntBASIC5.18□□□□□ -1.58
CLDN9O95484 AC016559.2-201ENST00000510759 359 ntBASIC5.18□□□□□ -1.58
CLDN9O95484 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.18□□□□□ -1.58
CLDN9O95484 IGLVIV-64-201ENST00000518581 301 ntBASIC5.18□□□□□ -1.58
CLDN9O95484 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.18□□□□□ -1.58
CLDN9O95484 AC135626.1-201ENST00000556983 435 ntBASIC5.18□□□□□ -1.58
CLDN9O95484 MIR1273E-201ENST00000581165 102 ntBASIC5.18□□□□□ -1.58
CLDN9O95484 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.18□□□□□ -1.58
CLDN9O95484 AC002069.2-201ENST00000603580 883 ntBASIC5.18□□□□□ -1.58
CLDN9O95484 FO393422.1-201ENST00000603908 708 ntBASIC5.18□□□□□ -1.58
CLDN9O95484 AL354950.1-201ENST00000614150 568 ntBASIC5.18□□□□□ -1.58
CLDN9O95484 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.18□□□□□ -1.58
CLDN9O95484 AC091932.2-201ENST00000623014 291 ntBASIC5.18□□□□□ -1.58
CLDN9O95484 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CLDN9O95484 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.18□□□□□ -1.58
CLDN9O95484 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
CLDN9O95484 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CLDN9O95484 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.18□□□□□ -1.58
CLDN9O95484 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CLDN9O95484 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CLDN9O95484 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.18□□□□□ -1.58
CLDN9O95484 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CLDN9O95484 AC123912.3-201ENST00000600907 1367 ntBASIC5.17□□□□□ -1.58
CLDN9O95484 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CLDN9O95484 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CLDN9O95484 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CLDN9O95484 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
CLDN9O95484 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CLDN9O95484 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CLDN9O95484 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
CLDN9O95484 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
CLDN9O95484 RNA5SP319-201ENST00000362768 119 ntBASIC5.17□□□□□ -1.58
CLDN9O95484 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CLDN9O95484 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CLDN9O95484 RNA5SP187-201ENST00000384400 119 ntBASIC5.17□□□□□ -1.58
CLDN9O95484 HSPA8P15-201ENST00000401676 786 ntBASIC5.17□□□□□ -1.58
CLDN9O95484 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5.17□□□□□ -1.58
CLDN9O95484 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.17□□□□□ -1.58
CLDN9O95484 PRUNEP1-201ENST00000425846 705 ntBASIC5.17□□□□□ -1.58
CLDN9O95484 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.17□□□□□ -1.58
CLDN9O95484 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.17□□□□□ -1.58
CLDN9O95484 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.17□□□□□ -1.58
CLDN9O95484 HMGN1P36-201ENST00000446623 298 ntBASIC5.17□□□□□ -1.58
CLDN9O95484 GAPDHP25-201ENST00000447061 1001 ntBASIC5.17□□□□□ -1.58
CLDN9O95484 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.17□□□□□ -1.58
CLDN9O95484 RPL31P15-201ENST00000449770 338 ntBASIC5.17□□□□□ -1.58
CLDN9O95484 GAPDHP14-201ENST00000450472 937 ntBASIC5.17□□□□□ -1.58
CLDN9O95484 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.17□□□□□ -1.58
CLDN9O95484 AC093827.1-201ENST00000480094 861 ntBASIC5.17□□□□□ -1.58
CLDN9O95484 RN7SL423P-201ENST00000486202 304 ntBASIC5.17□□□□□ -1.58
CLDN9O95484 AL049874.2-201ENST00000492636 288 ntBASIC5.17□□□□□ -1.58
CLDN9O95484 AC090638.1-201ENST00000498296 909 ntBASIC5.17□□□□□ -1.58
CLDN9O95484 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC5.17□□□□□ -1.58
CLDN9O95484 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.17□□□□□ -1.58
CLDN9O95484 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.17□□□□□ -1.58
CLDN9O95484 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.17□□□□□ -1.58
CLDN9O95484 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.17□□□□□ -1.58
CLDN9O95484 MTCYBP13-201ENST00000578634 1093 ntBASIC5.17□□□□□ -1.58
CLDN9O95484 MIR3614-201ENST00000581261 86 ntBASIC5.17□□□□□ -1.58
CLDN9O95484 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.17□□□□□ -1.58
CLDN9O95484 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.17□□□□□ -1.58
CLDN9O95484 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC5.17□□□□□ -1.58
CLDN9O95484 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
CLDN9O95484 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.17□□□□□ -1.58
CLDN9O95484 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.17□□□□□ -1.58
CLDN9O95484 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CLDN9O95484 MUC2-202ENST00000613187 4845 ntBASIC5.17□□□□□ -1.58
CLDN9O95484 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
CLDN9O95484 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CLDN9O95484 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
CLDN9O95484 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CLDN9O95484 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CLDN9O95484 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CLDN9O95484 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CLDN9O95484 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CLDN9O95484 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CLDN9O95484 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CLDN9O95484 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CLDN9O95484 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CLDN9O95484 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
CLDN9O95484 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CLDN9O95484 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CLDN9O95484 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.16□□□□□ -1.58
CLDN9O95484 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.16□□□□□ -1.58
CLDN9O95484 AL390119.1-201ENST00000440329 312 ntBASIC5.16□□□□□ -1.58
CLDN9O95484 AC073909.1-201ENST00000447112 999 ntBASIC5.16□□□□□ -1.58
CLDN9O95484 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.16□□□□□ -1.58
CLDN9O95484 CBX1P5-201ENST00000475330 559 ntBASIC5.16□□□□□ -1.58
CLDN9O95484 DEFB109A-201ENST00000482450 265 ntBASIC5.16□□□□□ -1.58
CLDN9O95484 AC058823.1-201ENST00000485315 474 ntBASIC5.16□□□□□ -1.58
CLDN9O95484 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.16□□□□□ -1.58
CLDN9O95484 RPL15P21-201ENST00000495592 567 ntBASIC5.16□□□□□ -1.58
CLDN9O95484 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.16□□□□□ -1.58
CLDN9O95484 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms