Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 CCNB2P1-201ENST00000399411 1150 ntBASIC4.99□□□□□ -1.61
LMX1BO60663 OR7E101P-201ENST00000400428 513 ntBASIC4.99□□□□□ -1.61
LMX1BO60663 RN7SKP29-201ENST00000410957 272 ntBASIC4.99□□□□□ -1.61
LMX1BO60663 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC4.99□□□□□ -1.61
LMX1BO60663 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC4.99□□□□□ -1.61
LMX1BO60663 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC4.99□□□□□ -1.61
LMX1BO60663 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC4.99□□□□□ -1.61
LMX1BO60663 AC138761.5-201ENST00000433967 325 ntBASIC4.99□□□□□ -1.61
LMX1BO60663 MTND2P2-201ENST00000434633 945 ntBASIC4.99□□□□□ -1.61
LMX1BO60663 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC4.99□□□□□ -1.61
LMX1BO60663 AC092106.1-201ENST00000444291 373 ntBASIC4.99□□□□□ -1.61
LMX1BO60663 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC4.99□□□□□ -1.61
LMX1BO60663 COX6B1P2-201ENST00000489624 230 ntBASIC4.99□□□□□ -1.61
LMX1BO60663 OR7E157P-201ENST00000494376 911 ntBASIC4.99□□□□□ -1.61
LMX1BO60663 GTF2IP9-201ENST00000502460 301 ntBASIC4.99□□□□□ -1.61
LMX1BO60663 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC4.99□□□□□ -1.61
LMX1BO60663 GAPDHP62-201ENST00000515313 990 ntBASIC4.99□□□□□ -1.61
LMX1BO60663 AC139365.2-201ENST00000517972 253 ntBASIC4.99□□□□□ -1.61
LMX1BO60663 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC4.99□□□□□ -1.61
LMX1BO60663 ASB8-202ENST00000535055 657 ntTSL 2 BASIC4.99□□□□□ -1.61
LMX1BO60663 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC4.99□□□□□ -1.61
LMX1BO60663 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
LMX1BO60663 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC4.99□□□□□ -1.61
LMX1BO60663 SUMO2P15-201ENST00000604285 278 ntBASIC4.99□□□□□ -1.61
LMX1BO60663 AC034236.3-201ENST00000605999 461 ntBASIC4.99□□□□□ -1.61
LMX1BO60663 AL355802.4-201ENST00000607635 548 ntBASIC4.99□□□□□ -1.61
LMX1BO60663 AL139099.4-201ENST00000614802 114 ntBASIC4.99□□□□□ -1.61
LMX1BO60663 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
LMX1BO60663 AL138955.1-201ENST00000622881 1040 ntBASIC4.99□□□□□ -1.61
LMX1BO60663 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
LMX1BO60663 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC4.99□□□□□ -1.61
LMX1BO60663 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.99□□□□□ -1.61
LMX1BO60663 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC4.99□□□□□ -1.61
LMX1BO60663 OR6C71P-202ENST00000641886 1107 ntBASIC4.99□□□□□ -1.61
LMX1BO60663 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
LMX1BO60663 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC4.99□□□□□ -1.61
LMX1BO60663 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC4.99□□□□□ -1.61
LMX1BO60663 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
LMX1BO60663 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
LMX1BO60663 SAMM50P1-201ENST00000455403 1399 ntBASIC4.99□□□□□ -1.61
LMX1BO60663 EEF1A1P33-201ENST00000554413 1362 ntBASIC4.99□□□□□ -1.61
LMX1BO60663 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC4.99□□□□□ -1.61
LMX1BO60663 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
LMX1BO60663 AL137141.1-201ENST00000624622 4836 ntBASIC4.99□□□□□ -1.61
LMX1BO60663 AC005005.4-201ENST00000623789 16698 ntBASIC4.99□□□□□ -1.61
LMX1BO60663 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
LMX1BO60663 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
LMX1BO60663 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
LMX1BO60663 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC4.98□□□□□ -1.61
LMX1BO60663 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
LMX1BO60663 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC4.98□□□□□ -1.61
LMX1BO60663 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
LMX1BO60663 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC4.98□□□□□ -1.61
LMX1BO60663 FGG-205ENST00000407946 1636 ntTSL 5 BASIC4.98□□□□□ -1.61
LMX1BO60663 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
LMX1BO60663 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
LMX1BO60663 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC4.98□□□□□ -1.61
LMX1BO60663 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
LMX1BO60663 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LMX1BO60663 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LMX1BO60663 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LMX1BO60663 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
LMX1BO60663 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
LMX1BO60663 RNU6-386P-201ENST00000362650 107 ntBASIC4.98□□□□□ -1.61
LMX1BO60663 RN7SKP160-201ENST00000363804 340 ntBASIC4.98□□□□□ -1.61
LMX1BO60663 SNORA74A-201ENST00000364089 198 ntBASIC4.98□□□□□ -1.61
LMX1BO60663 MIR122-201ENST00000385044 85 ntBASIC4.98□□□□□ -1.61
LMX1BO60663 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC4.98□□□□□ -1.61
LMX1BO60663 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC4.98□□□□□ -1.61
LMX1BO60663 AL357752.1-201ENST00000412817 349 ntBASIC4.98□□□□□ -1.61
LMX1BO60663 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC4.98□□□□□ -1.61
LMX1BO60663 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC4.98□□□□□ -1.61
LMX1BO60663 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC4.98□□□□□ -1.61
LMX1BO60663 DEFA9P-201ENST00000433042 285 ntBASIC4.98□□□□□ -1.61
LMX1BO60663 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC4.98□□□□□ -1.61
LMX1BO60663 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.98□□□□□ -1.61
LMX1BO60663 MED28P3-201ENST00000444288 531 ntBASIC4.98□□□□□ -1.61
LMX1BO60663 OR7E116P-201ENST00000448529 957 ntBASIC4.98□□□□□ -1.61
LMX1BO60663 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC4.98□□□□□ -1.61
LMX1BO60663 GEMIN2P1-201ENST00000454246 752 ntBASIC4.98□□□□□ -1.61
LMX1BO60663 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC4.98□□□□□ -1.61
LMX1BO60663 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.98□□□□□ -1.61
LMX1BO60663 RPS7P6-201ENST00000485777 579 ntBASIC4.98□□□□□ -1.61
LMX1BO60663 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
LMX1BO60663 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.98□□□□□ -1.61
LMX1BO60663 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC4.98□□□□□ -1.61
LMX1BO60663 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC4.98□□□□□ -1.61
LMX1BO60663 AC137627.1-201ENST00000545761 289 ntBASIC4.98□□□□□ -1.61
LMX1BO60663 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC4.98□□□□□ -1.61
LMX1BO60663 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC4.98□□□□□ -1.61
LMX1BO60663 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC4.98□□□□□ -1.61
LMX1BO60663 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC4.98□□□□□ -1.61
LMX1BO60663 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC4.98□□□□□ -1.61
LMX1BO60663 AC104072.1-201ENST00000568817 668 ntBASIC4.98□□□□□ -1.61
LMX1BO60663 SETP3-201ENST00000581726 813 ntBASIC4.98□□□□□ -1.61
LMX1BO60663 AC006116.7-201ENST00000590141 756 ntBASIC4.98□□□□□ -1.61
LMX1BO60663 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LMX1BO60663 AL356608.1-201ENST00000610034 820 ntBASIC4.98□□□□□ -1.61
LMX1BO60663 AL031658.2-201ENST00000616850 651 ntBASIC4.98□□□□□ -1.61
LMX1BO60663 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms