Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AC019072.1-201ENST00000604535 1551 ntBASIC4.2□□□□□ -1.74
SSSCA1O60232 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.2□□□□□ -1.74
SSSCA1O60232 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SSSCA1O60232 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
SSSCA1O60232 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
SSSCA1O60232 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.2□□□□□ -1.74
SSSCA1O60232 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SSSCA1O60232 RN7SKP28-201ENST00000364770 305 ntBASIC4.2□□□□□ -1.74
SSSCA1O60232 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SSSCA1O60232 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SSSCA1O60232 RN7SKP97-201ENST00000410966 333 ntBASIC4.2□□□□□ -1.74
SSSCA1O60232 AC245060.4-201ENST00000413293 1121 ntBASIC4.2□□□□□ -1.74
SSSCA1O60232 AL359885.1-201ENST00000415786 903 ntBASIC4.2□□□□□ -1.74
SSSCA1O60232 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.2□□□□□ -1.74
SSSCA1O60232 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC4.2□□□□□ -1.74
SSSCA1O60232 SRSF1P1-201ENST00000424058 520 ntBASIC4.2□□□□□ -1.74
SSSCA1O60232 NAP1L4P2-201ENST00000425958 899 ntBASIC4.2□□□□□ -1.74
SSSCA1O60232 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC4.2□□□□□ -1.74
SSSCA1O60232 HSPE1P16-201ENST00000426640 348 ntBASIC4.2□□□□□ -1.74
SSSCA1O60232 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC4.2□□□□□ -1.74
SSSCA1O60232 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.2□□□□□ -1.74
SSSCA1O60232 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC4.2□□□□□ -1.74
SSSCA1O60232 AL356981.1-201ENST00000454879 684 ntBASIC4.2□□□□□ -1.74
SSSCA1O60232 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC4.2□□□□□ -1.74
SSSCA1O60232 GYG1P1-201ENST00000460864 698 ntBASIC4.2□□□□□ -1.74
SSSCA1O60232 RPS26P24-201ENST00000497656 331 ntBASIC4.2□□□□□ -1.74
SSSCA1O60232 LSM3P4-201ENST00000502948 309 ntBASIC4.2□□□□□ -1.74
SSSCA1O60232 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.2□□□□□ -1.74
SSSCA1O60232 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
SSSCA1O60232 AC073358.1-201ENST00000505671 684 ntBASIC4.2□□□□□ -1.74
SSSCA1O60232 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.2□□□□□ -1.74
SSSCA1O60232 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SSSCA1O60232 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC4.2□□□□□ -1.74
SSSCA1O60232 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC4.2□□□□□ -1.74
SSSCA1O60232 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC4.2□□□□□ -1.74
SSSCA1O60232 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.2□□□□□ -1.74
SSSCA1O60232 AC002310.3-201ENST00000569728 723 ntBASIC4.2□□□□□ -1.74
SSSCA1O60232 DPRXP4-201ENST00000578053 568 ntBASIC4.2□□□□□ -1.74
SSSCA1O60232 AP005262.1-201ENST00000582646 997 ntBASIC4.2□□□□□ -1.74
SSSCA1O60232 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.2□□□□□ -1.74
SSSCA1O60232 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.2□□□□□ -1.74
SSSCA1O60232 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC4.2□□□□□ -1.74
SSSCA1O60232 TAS2R6P-201ENST00000605022 826 ntBASIC4.2□□□□□ -1.74
SSSCA1O60232 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
SSSCA1O60232 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
SSSCA1O60232 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
SSSCA1O60232 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
SSSCA1O60232 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.2□□□□□ -1.74
SSSCA1O60232 SCN1A-220ENST00000641603 12506 ntBASIC4.2□□□□□ -1.74
SSSCA1O60232 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SSSCA1O60232 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SSSCA1O60232 OR55B1P-203ENST00000641518 2602 ntBASIC4.2□□□□□ -1.74
SSSCA1O60232 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SSSCA1O60232 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SSSCA1O60232 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SSSCA1O60232 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.19□□□□□ -1.74
SSSCA1O60232 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.19□□□□□ -1.74
SSSCA1O60232 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
SSSCA1O60232 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SSSCA1O60232 AL672167.1-205ENST00000641112 3080 ntBASIC4.19□□□□□ -1.74
SSSCA1O60232 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.19□□□□□ -1.74
SSSCA1O60232 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.19□□□□□ -1.74
SSSCA1O60232 MIR375-201ENST00000362103 64 ntBASIC4.19□□□□□ -1.74
SSSCA1O60232 RNA5SP394-201ENST00000364216 119 ntBASIC4.19□□□□□ -1.74
SSSCA1O60232 RNU4-2-201ENST00000365668 141 ntBASIC4.19□□□□□ -1.74
SSSCA1O60232 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
SSSCA1O60232 SUGT1P2-201ENST00000379452 992 ntBASIC4.19□□□□□ -1.74
SSSCA1O60232 MIR105-1-201ENST00000385222 81 ntBASIC4.19□□□□□ -1.74
SSSCA1O60232 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
SSSCA1O60232 RN7SKP125-201ENST00000410481 302 ntBASIC4.19□□□□□ -1.74
SSSCA1O60232 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC4.19□□□□□ -1.74
SSSCA1O60232 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.19□□□□□ -1.74
SSSCA1O60232 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC4.19□□□□□ -1.74
SSSCA1O60232 FTLP19-201ENST00000433300 394 ntBASIC4.19□□□□□ -1.74
SSSCA1O60232 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SSSCA1O60232 AMYP1-201ENST00000440059 1023 ntBASIC4.19□□□□□ -1.74
SSSCA1O60232 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.19□□□□□ -1.74
SSSCA1O60232 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.19□□□□□ -1.74
SSSCA1O60232 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SSSCA1O60232 AC018980.1-201ENST00000457848 862 ntTSL 3 BASIC4.19□□□□□ -1.74
SSSCA1O60232 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC4.19□□□□□ -1.74
SSSCA1O60232 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.19□□□□□ -1.74
SSSCA1O60232 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.19□□□□□ -1.74
SSSCA1O60232 SUMO2P4-201ENST00000504193 276 ntBASIC4.19□□□□□ -1.74
SSSCA1O60232 AC025458.1-201ENST00000506046 166 ntBASIC4.19□□□□□ -1.74
SSSCA1O60232 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.19□□□□□ -1.74
SSSCA1O60232 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC4.19□□□□□ -1.74
SSSCA1O60232 AC006427.1-201ENST00000514359 712 ntBASIC4.19□□□□□ -1.74
SSSCA1O60232 HSD3BP3-201ENST00000514706 994 ntBASIC4.19□□□□□ -1.74
SSSCA1O60232 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC4.19□□□□□ -1.74
SSSCA1O60232 RNA5SP249-201ENST00000516127 99 ntBASIC4.19□□□□□ -1.74
SSSCA1O60232 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC4.19□□□□□ -1.74
SSSCA1O60232 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC4.19□□□□□ -1.74
SSSCA1O60232 AP003033.2-201ENST00000528901 805 ntBASIC4.19□□□□□ -1.74
SSSCA1O60232 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.19□□□□□ -1.74
SSSCA1O60232 AC068305.2-201ENST00000550567 1205 ntBASIC4.19□□□□□ -1.74
SSSCA1O60232 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.19□□□□□ -1.74
SSSCA1O60232 MIR3154-201ENST00000577829 84 ntBASIC4.19□□□□□ -1.74
SSSCA1O60232 AC008814.1-201ENST00000603797 406 ntBASIC4.19□□□□□ -1.74
SSSCA1O60232 AC139792.1-201ENST00000607051 647 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 135.1 ms