Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AC004690.1-201ENST00000418216 328 ntBASIC5.27□□□□□ -1.57
PDLIM1O00151 BX284632.2-201ENST00000421091 399 ntBASIC5.27□□□□□ -1.57
PDLIM1O00151 AC115283.1-201ENST00000427353 400 ntBASIC5.27□□□□□ -1.57
PDLIM1O00151 TMEM183AP1-205ENST00000432739 290 ntBASIC5.27□□□□□ -1.57
PDLIM1O00151 GAPDHP48-201ENST00000436626 961 ntBASIC5.27□□□□□ -1.57
PDLIM1O00151 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.27□□□□□ -1.57
PDLIM1O00151 AL512605.1-202ENST00000441919 381 ntBASIC5.27□□□□□ -1.57
PDLIM1O00151 BMS1P10-201ENST00000443754 1120 ntBASIC5.27□□□□□ -1.57
PDLIM1O00151 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.27□□□□□ -1.57
PDLIM1O00151 AL359955.2-201ENST00000445380 353 ntBASIC5.27□□□□□ -1.57
PDLIM1O00151 NDUFA5P5-201ENST00000468361 342 ntBASIC5.27□□□□□ -1.57
PDLIM1O00151 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.27□□□□□ -1.57
PDLIM1O00151 AP000926.3-201ENST00000497201 299 ntBASIC5.27□□□□□ -1.57
PDLIM1O00151 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.27□□□□□ -1.57
PDLIM1O00151 OR5H7P-201ENST00000514084 930 ntBASIC5.27□□□□□ -1.57
PDLIM1O00151 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.27□□□□□ -1.57
PDLIM1O00151 AC008126.1-201ENST00000549019 480 ntBASIC5.27□□□□□ -1.57
PDLIM1O00151 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.27□□□□□ -1.57
PDLIM1O00151 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PDLIM1O00151 AC060766.1-201ENST00000590824 627 ntBASIC5.27□□□□□ -1.57
PDLIM1O00151 AL138895.2-201ENST00000603019 178 ntBASIC5.27□□□□□ -1.57
PDLIM1O00151 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.27□□□□□ -1.57
PDLIM1O00151 AL365181.4-201ENST00000609800 547 ntBASIC5.27□□□□□ -1.57
PDLIM1O00151 AL356608.1-201ENST00000610034 820 ntBASIC5.27□□□□□ -1.57
PDLIM1O00151 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.27□□□□□ -1.57
PDLIM1O00151 AC092111.2-201ENST00000611627 1414 ntBASIC5.27□□□□□ -1.57
PDLIM1O00151 MIR6778-201ENST00000617912 73 ntBASIC5.27□□□□□ -1.57
PDLIM1O00151 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.27□□□□□ -1.57
PDLIM1O00151 AC129778.1-202ENST00000623812 261 ntBASIC5.27□□□□□ -1.57
PDLIM1O00151 AL591379.1-207ENST00000635982 261 ntBASIC5.27□□□□□ -1.57
PDLIM1O00151 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.27□□□□□ -1.57
PDLIM1O00151 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.27□□□□□ -1.57
PDLIM1O00151 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.27□□□□□ -1.57
PDLIM1O00151 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
PDLIM1O00151 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
PDLIM1O00151 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
PDLIM1O00151 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.26□□□□□ -1.57
PDLIM1O00151 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC5.26□□□□□ -1.57
PDLIM1O00151 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
PDLIM1O00151 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
PDLIM1O00151 AL359715.3-201ENST00000569267 2123 ntBASIC5.26□□□□□ -1.57
PDLIM1O00151 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.26□□□□□ -1.57
PDLIM1O00151 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
PDLIM1O00151 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PDLIM1O00151 RNU1-150P-201ENST00000362491 162 ntBASIC5.26□□□□□ -1.57
PDLIM1O00151 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PDLIM1O00151 MIR1282-201ENST00000408865 101 ntBASIC5.26□□□□□ -1.57
PDLIM1O00151 AC234781.4-201ENST00000419384 244 ntBASIC5.26□□□□□ -1.57
PDLIM1O00151 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC5.26□□□□□ -1.57
PDLIM1O00151 MARK2P12-201ENST00000420129 585 ntBASIC5.26□□□□□ -1.57
PDLIM1O00151 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.26□□□□□ -1.57
PDLIM1O00151 AC104333.2-201ENST00000422630 192 ntBASIC5.26□□□□□ -1.57
PDLIM1O00151 OR2AH1P-201ENST00000425717 928 ntBASIC5.26□□□□□ -1.57
PDLIM1O00151 UBE2V2P1-201ENST00000434717 398 ntBASIC5.26□□□□□ -1.57
PDLIM1O00151 AC073465.2-201ENST00000440938 498 ntBASIC5.26□□□□□ -1.57
PDLIM1O00151 HMGB3P9-201ENST00000441799 583 ntBASIC5.26□□□□□ -1.57
PDLIM1O00151 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.26□□□□□ -1.57
PDLIM1O00151 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
PDLIM1O00151 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.26□□□□□ -1.57
PDLIM1O00151 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.26□□□□□ -1.57
PDLIM1O00151 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.26□□□□□ -1.57
PDLIM1O00151 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.26□□□□□ -1.57
PDLIM1O00151 Y_RNA.667-201ENST00000516212 107 ntBASIC5.26□□□□□ -1.57
PDLIM1O00151 RN7SKP253-201ENST00000516424 309 ntBASIC5.26□□□□□ -1.57
PDLIM1O00151 RNA5SP438-201ENST00000516561 112 ntBASIC5.26□□□□□ -1.57
PDLIM1O00151 AC134698.5-201ENST00000519444 336 ntBASIC5.26□□□□□ -1.57
PDLIM1O00151 AC092709.1-201ENST00000521355 1045 ntBASIC5.26□□□□□ -1.57
PDLIM1O00151 AC130364.2-201ENST00000528639 604 ntBASIC5.26□□□□□ -1.57
PDLIM1O00151 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.26□□□□□ -1.57
PDLIM1O00151 DYNLL1P4-201ENST00000549314 266 ntBASIC5.26□□□□□ -1.57
PDLIM1O00151 NDUFA5P11-201ENST00000567995 343 ntBASIC5.26□□□□□ -1.57
PDLIM1O00151 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.26□□□□□ -1.57
PDLIM1O00151 AC010547.7-201ENST00000570323 333 ntBASIC5.26□□□□□ -1.57
PDLIM1O00151 AP005119.2-201ENST00000579735 1105 ntBASIC5.26□□□□□ -1.57
PDLIM1O00151 PRPF19P1-201ENST00000584766 898 ntBASIC5.26□□□□□ -1.57
PDLIM1O00151 AC067773.1-201ENST00000603284 1094 ntBASIC5.26□□□□□ -1.57
PDLIM1O00151 NF1P10-201ENST00000613227 742 ntBASIC5.26□□□□□ -1.57
PDLIM1O00151 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.26□□□□□ -1.57
PDLIM1O00151 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.26□□□□□ -1.57
PDLIM1O00151 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PDLIM1O00151 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
PDLIM1O00151 AC027088.4-201ENST00000611559 1947 ntBASIC5.26□□□□□ -1.57
PDLIM1O00151 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
PDLIM1O00151 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PDLIM1O00151 CR382285.2-201ENST00000624662 1495 ntBASIC5.26□□□□□ -1.57
PDLIM1O00151 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
PDLIM1O00151 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
PDLIM1O00151 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PDLIM1O00151 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.25□□□□□ -1.57
PDLIM1O00151 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PDLIM1O00151 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
PDLIM1O00151 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
PDLIM1O00151 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PDLIM1O00151 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
PDLIM1O00151 AL360270.2-201ENST00000562952 5985 ntBASIC5.25□□□□□ -1.57
PDLIM1O00151 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PDLIM1O00151 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PDLIM1O00151 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PDLIM1O00151 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PDLIM1O00151 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms