Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
NPIPA2E9PIF3 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NPIPA2E9PIF3 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NPIPA2E9PIF3 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.1□□□□□ -1.59
NPIPA2E9PIF3 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NPIPA2E9PIF3 RNU4-2-201ENST00000365668 141 ntBASIC5.1□□□□□ -1.59
NPIPA2E9PIF3 MIR137-201ENST00000385223 102 ntBASIC5.1□□□□□ -1.59
NPIPA2E9PIF3 MIR130A-201ENST00000385274 89 ntBASIC5.1□□□□□ -1.59
NPIPA2E9PIF3 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
NPIPA2E9PIF3 GAPDHP42-201ENST00000406848 981 ntBASIC5.1□□□□□ -1.59
NPIPA2E9PIF3 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.1□□□□□ -1.59
NPIPA2E9PIF3 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.1□□□□□ -1.59
NPIPA2E9PIF3 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NPIPA2E9PIF3 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC5.1□□□□□ -1.59
NPIPA2E9PIF3 SOCS5P3-201ENST00000425115 1576 ntBASIC5.1□□□□□ -1.59
NPIPA2E9PIF3 MTCO1P51-201ENST00000427672 1060 ntBASIC5.1□□□□□ -1.59
NPIPA2E9PIF3 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
NPIPA2E9PIF3 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.1□□□□□ -1.59
NPIPA2E9PIF3 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.1□□□□□ -1.59
NPIPA2E9PIF3 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.1□□□□□ -1.59
NPIPA2E9PIF3 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.1□□□□□ -1.59
NPIPA2E9PIF3 AC025470.1-201ENST00000510053 2032 ntBASIC5.1□□□□□ -1.59
NPIPA2E9PIF3 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC5.1□□□□□ -1.59
NPIPA2E9PIF3 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.1□□□□□ -1.59
NPIPA2E9PIF3 RN7SKP34-201ENST00000516142 244 ntBASIC5.1□□□□□ -1.59
NPIPA2E9PIF3 RNA5SP34-201ENST00000516887 130 ntBASIC5.1□□□□□ -1.59
NPIPA2E9PIF3 RN7SKP99-201ENST00000517028 307 ntBASIC5.1□□□□□ -1.59
NPIPA2E9PIF3 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.1□□□□□ -1.59
NPIPA2E9PIF3 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.1□□□□□ -1.59
NPIPA2E9PIF3 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.1□□□□□ -1.59
NPIPA2E9PIF3 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.1□□□□□ -1.59
NPIPA2E9PIF3 DUX4L52-201ENST00000549363 777 ntBASIC5.1□□□□□ -1.59
NPIPA2E9PIF3 AL390334.1-201ENST00000556395 450 ntBASIC5.1□□□□□ -1.59
NPIPA2E9PIF3 AC009852.2-201ENST00000567898 485 ntBASIC5.1□□□□□ -1.59
NPIPA2E9PIF3 OR7E18P-201ENST00000592589 702 ntBASIC5.1□□□□□ -1.59
NPIPA2E9PIF3 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.1□□□□□ -1.59
NPIPA2E9PIF3 AC010245.2-201ENST00000606908 1167 ntBASIC5.1□□□□□ -1.59
NPIPA2E9PIF3 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.1□□□□□ -1.59
NPIPA2E9PIF3 AL355488.2-201ENST00000609909 2850 ntBASIC5.1□□□□□ -1.59
NPIPA2E9PIF3 AL356608.1-201ENST00000610034 820 ntBASIC5.1□□□□□ -1.59
NPIPA2E9PIF3 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NPIPA2E9PIF3 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
NPIPA2E9PIF3 AC074140.1-201ENST00000621617 208 ntBASIC5.1□□□□□ -1.59
NPIPA2E9PIF3 AC002044.3-201ENST00000623314 541 ntBASIC5.1□□□□□ -1.59
NPIPA2E9PIF3 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.1□□□□□ -1.59
NPIPA2E9PIF3 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
NPIPA2E9PIF3 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.1□□□□□ -1.59
NPIPA2E9PIF3 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
NPIPA2E9PIF3 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
NPIPA2E9PIF3 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
NPIPA2E9PIF3 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
NPIPA2E9PIF3 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
NPIPA2E9PIF3 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.09□□□□□ -1.59
NPIPA2E9PIF3 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.09□□□□□ -1.59
NPIPA2E9PIF3 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
NPIPA2E9PIF3 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
NPIPA2E9PIF3 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.09□□□□□ -1.59
NPIPA2E9PIF3 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
NPIPA2E9PIF3 AC011933.2-201ENST00000578539 2790 ntBASIC5.09□□□□□ -1.59
NPIPA2E9PIF3 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.09□□□□□ -1.59
NPIPA2E9PIF3 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
NPIPA2E9PIF3 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
NPIPA2E9PIF3 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
NPIPA2E9PIF3 RNU6-697P-201ENST00000363348 107 ntBASIC5.09□□□□□ -1.59
NPIPA2E9PIF3 U3.7-201ENST00000363668 216 ntBASIC5.09□□□□□ -1.59
NPIPA2E9PIF3 RN7SKP28-201ENST00000364770 305 ntBASIC5.09□□□□□ -1.59
NPIPA2E9PIF3 RNA5SP30-201ENST00000365552 115 ntBASIC5.09□□□□□ -1.59
NPIPA2E9PIF3 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.09□□□□□ -1.59
NPIPA2E9PIF3 AL035696.2-201ENST00000407941 709 ntBASIC5.09□□□□□ -1.59
NPIPA2E9PIF3 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.09□□□□□ -1.59
NPIPA2E9PIF3 CASKP1-201ENST00000412870 582 ntBASIC5.09□□□□□ -1.59
NPIPA2E9PIF3 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.09□□□□□ -1.59
NPIPA2E9PIF3 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
NPIPA2E9PIF3 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.09□□□□□ -1.59
NPIPA2E9PIF3 TMEM183AP1-205ENST00000432739 290 ntBASIC5.09□□□□□ -1.59
NPIPA2E9PIF3 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.09□□□□□ -1.59
NPIPA2E9PIF3 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.09□□□□□ -1.59
NPIPA2E9PIF3 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
NPIPA2E9PIF3 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.09□□□□□ -1.59
NPIPA2E9PIF3 RPS4XP12-201ENST00000461747 709 ntBASIC5.09□□□□□ -1.59
NPIPA2E9PIF3 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
NPIPA2E9PIF3 RPS7P6-201ENST00000485777 579 ntBASIC5.09□□□□□ -1.59
NPIPA2E9PIF3 AC090058.1-201ENST00000498788 435 ntBASIC5.09□□□□□ -1.59
NPIPA2E9PIF3 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC5.09□□□□□ -1.59
NPIPA2E9PIF3 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.09□□□□□ -1.59
NPIPA2E9PIF3 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.09□□□□□ -1.59
NPIPA2E9PIF3 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.09□□□□□ -1.59
NPIPA2E9PIF3 FKBP1AP1-201ENST00000594588 318 ntBASIC5.09□□□□□ -1.59
NPIPA2E9PIF3 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.09□□□□□ -1.59
NPIPA2E9PIF3 AC092944.2-201ENST00000605443 889 ntBASIC5.09□□□□□ -1.59
NPIPA2E9PIF3 AL359513.1-201ENST00000614364 557 ntBASIC5.09□□□□□ -1.59
NPIPA2E9PIF3 AC107905.1-201ENST00000616204 426 ntBASIC5.09□□□□□ -1.59
NPIPA2E9PIF3 AL158062.1-201ENST00000619632 745 ntBASIC5.09□□□□□ -1.59
NPIPA2E9PIF3 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.09□□□□□ -1.59
NPIPA2E9PIF3 AC132068.1-201ENST00000623805 459 ntBASIC5.09□□□□□ -1.59
NPIPA2E9PIF3 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.09□□□□□ -1.59
NPIPA2E9PIF3 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.09□□□□□ -1.59
NPIPA2E9PIF3 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.09□□□□□ -1.59
NPIPA2E9PIF3 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
NPIPA2E9PIF3 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms