Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 AC069304.1-201ENST00000491593 704 ntBASIC5.23□□□□□ -1.57
TRIM49D1C9J1S8 AC023424.1-201ENST00000496058 459 ntBASIC5.23□□□□□ -1.57
TRIM49D1C9J1S8 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.23□□□□□ -1.57
TRIM49D1C9J1S8 AC006427.1-201ENST00000514359 712 ntBASIC5.23□□□□□ -1.57
TRIM49D1C9J1S8 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.23□□□□□ -1.57
TRIM49D1C9J1S8 GTF2IP11-201ENST00000526931 420 ntBASIC5.23□□□□□ -1.57
TRIM49D1C9J1S8 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.23□□□□□ -1.57
TRIM49D1C9J1S8 AC008814.1-201ENST00000603797 406 ntBASIC5.23□□□□□ -1.57
TRIM49D1C9J1S8 AC108359.1-201ENST00000616451 1211 ntBASIC5.23□□□□□ -1.57
TRIM49D1C9J1S8 CU639417.4-201ENST00000623928 207 ntBASIC5.23□□□□□ -1.57
TRIM49D1C9J1S8 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.23□□□□□ -1.57
TRIM49D1C9J1S8 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
TRIM49D1C9J1S8 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.23□□□□□ -1.57
TRIM49D1C9J1S8 AC006484.1-201ENST00000435086 1884 ntBASIC5.23□□□□□ -1.57
TRIM49D1C9J1S8 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TRIM49D1C9J1S8 OR13C1P-202ENST00000641378 2919 ntBASIC5.23□□□□□ -1.57
TRIM49D1C9J1S8 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TRIM49D1C9J1S8 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.23□□□□□ -1.57
TRIM49D1C9J1S8 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
TRIM49D1C9J1S8 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM49D1C9J1S8 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.22□□□□□ -1.57
TRIM49D1C9J1S8 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.22□□□□□ -1.57
TRIM49D1C9J1S8 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.22□□□□□ -1.57
TRIM49D1C9J1S8 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.22□□□□□ -1.57
TRIM49D1C9J1S8 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM49D1C9J1S8 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
TRIM49D1C9J1S8 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM49D1C9J1S8 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
TRIM49D1C9J1S8 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.22□□□□□ -1.57
TRIM49D1C9J1S8 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM49D1C9J1S8 AL035079.1-201ENST00000405210 287 ntBASIC5.22□□□□□ -1.57
TRIM49D1C9J1S8 SNORA11.3-201ENST00000408471 128 ntBASIC5.22□□□□□ -1.57
TRIM49D1C9J1S8 BMS1P17-202ENST00000416720 316 ntBASIC5.22□□□□□ -1.57
TRIM49D1C9J1S8 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.22□□□□□ -1.57
TRIM49D1C9J1S8 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM49D1C9J1S8 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM49D1C9J1S8 RPL12P18-201ENST00000437175 325 ntBASIC5.22□□□□□ -1.57
TRIM49D1C9J1S8 DNAJA1P5-201ENST00000440278 943 ntBASIC5.22□□□□□ -1.57
TRIM49D1C9J1S8 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.22□□□□□ -1.57
TRIM49D1C9J1S8 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.22□□□□□ -1.57
TRIM49D1C9J1S8 TMEM97P2-201ENST00000517841 403 ntBASIC5.22□□□□□ -1.57
TRIM49D1C9J1S8 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.22□□□□□ -1.57
TRIM49D1C9J1S8 IGKV2-4-201ENST00000523070 340 ntBASIC5.22□□□□□ -1.57
TRIM49D1C9J1S8 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.22□□□□□ -1.57
TRIM49D1C9J1S8 RBM22P1-201ENST00000578589 1214 ntBASIC5.22□□□□□ -1.57
TRIM49D1C9J1S8 AC011840.5-201ENST00000582125 771 ntBASIC5.22□□□□□ -1.57
TRIM49D1C9J1S8 AL138895.2-201ENST00000603019 178 ntBASIC5.22□□□□□ -1.57
TRIM49D1C9J1S8 AC006363.1-201ENST00000603806 463 ntBASIC5.22□□□□□ -1.57
TRIM49D1C9J1S8 AC018695.5-201ENST00000605872 315 ntBASIC5.22□□□□□ -1.57
TRIM49D1C9J1S8 AC108865.2-201ENST00000606881 432 ntBASIC5.22□□□□□ -1.57
TRIM49D1C9J1S8 AC000068.2-201ENST00000608816 460 ntBASIC5.22□□□□□ -1.57
TRIM49D1C9J1S8 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM49D1C9J1S8 AC037198.3-201ENST00000616754 526 ntBASIC5.22□□□□□ -1.57
TRIM49D1C9J1S8 SNORA11.6-201ENST00000619030 128 ntBASIC5.22□□□□□ -1.57
TRIM49D1C9J1S8 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.22□□□□□ -1.57
TRIM49D1C9J1S8 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
TRIM49D1C9J1S8 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.22□□□□□ -1.57
TRIM49D1C9J1S8 AL672167.1-204ENST00000641875 3017 ntBASIC5.22□□□□□ -1.57
TRIM49D1C9J1S8 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM49D1C9J1S8 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
TRIM49D1C9J1S8 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM49D1C9J1S8 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.22□□□□□ -1.57
TRIM49D1C9J1S8 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM49D1C9J1S8 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.22□□□□□ -1.57
TRIM49D1C9J1S8 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM49D1C9J1S8 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM49D1C9J1S8 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.21□□□□□ -1.57
TRIM49D1C9J1S8 AC025574.1-201ENST00000554784 1653 ntBASIC5.21□□□□□ -1.57
TRIM49D1C9J1S8 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
TRIM49D1C9J1S8 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.57
TRIM49D1C9J1S8 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.21□□□□□ -1.57
TRIM49D1C9J1S8 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
TRIM49D1C9J1S8 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.57
TRIM49D1C9J1S8 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
TRIM49D1C9J1S8 AC091305.2-201ENST00000624049 1576 ntBASIC5.21□□□□□ -1.57
TRIM49D1C9J1S8 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
TRIM49D1C9J1S8 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
TRIM49D1C9J1S8 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM49D1C9J1S8 AC005261.6-201ENST00000623072 1387 ntBASIC5.21□□□□□ -1.58
TRIM49D1C9J1S8 AC000374.1-201ENST00000434698 1745 ntBASIC5.21□□□□□ -1.58
TRIM49D1C9J1S8 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM49D1C9J1S8 RNU6-673P-201ENST00000365084 104 ntBASIC5.21□□□□□ -1.58
TRIM49D1C9J1S8 RNU1-74P-201ENST00000384108 171 ntBASIC5.21□□□□□ -1.58
TRIM49D1C9J1S8 MIR105-1-201ENST00000385222 81 ntBASIC5.21□□□□□ -1.58
TRIM49D1C9J1S8 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
TRIM49D1C9J1S8 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
TRIM49D1C9J1S8 AL390316.1-201ENST00000406279 553 ntBASIC5.21□□□□□ -1.58
TRIM49D1C9J1S8 U3.32-201ENST00000408116 212 ntBASIC5.21□□□□□ -1.58
TRIM49D1C9J1S8 RNA5SP487-201ENST00000410186 122 ntBASIC5.21□□□□□ -1.58
TRIM49D1C9J1S8 EEF1B2P8-201ENST00000414101 671 ntBASIC5.21□□□□□ -1.58
TRIM49D1C9J1S8 TNPO1P1-201ENST00000423641 1138 ntBASIC5.21□□□□□ -1.58
TRIM49D1C9J1S8 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.21□□□□□ -1.58
TRIM49D1C9J1S8 NANOGP4-201ENST00000427230 913 ntBASIC5.21□□□□□ -1.58
TRIM49D1C9J1S8 AL161722.2-201ENST00000434731 981 ntBASIC5.21□□□□□ -1.58
TRIM49D1C9J1S8 GTF3AP5-201ENST00000442645 697 ntBASIC5.21□□□□□ -1.58
TRIM49D1C9J1S8 RPL7AP61-201ENST00000443410 636 ntBASIC5.21□□□□□ -1.58
TRIM49D1C9J1S8 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.21□□□□□ -1.58
TRIM49D1C9J1S8 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.21□□□□□ -1.58
TRIM49D1C9J1S8 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM49D1C9J1S8 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms