Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
COL4A3BPQ9Y5P4 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
COL4A3BPQ9Y5P4 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.77□□□□□ -1.33
COL4A3BPQ9Y5P4 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL4A3BPQ9Y5P4 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC6.77□□□□□ -1.33
COL4A3BPQ9Y5P4 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
COL4A3BPQ9Y5P4 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
COL4A3BPQ9Y5P4 ZNF849P-201ENST00000594711 1566 ntBASIC6.77□□□□□ -1.33
COL4A3BPQ9Y5P4 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.77□□□□□ -1.33
COL4A3BPQ9Y5P4 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
COL4A3BPQ9Y5P4 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
COL4A3BPQ9Y5P4 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL4A3BPQ9Y5P4 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC6.76□□□□□ -1.33
COL4A3BPQ9Y5P4 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.76□□□□□ -1.33
COL4A3BPQ9Y5P4 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL4A3BPQ9Y5P4 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL4A3BPQ9Y5P4 AC106754.1-201ENST00000562632 1513 ntBASIC6.76□□□□□ -1.33
COL4A3BPQ9Y5P4 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.76□□□□□ -1.33
COL4A3BPQ9Y5P4 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
COL4A3BPQ9Y5P4 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.76□□□□□ -1.33
COL4A3BPQ9Y5P4 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
COL4A3BPQ9Y5P4 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
COL4A3BPQ9Y5P4 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC6.76□□□□□ -1.33
COL4A3BPQ9Y5P4 RPL23AP59-201ENST00000399415 461 ntBASIC6.76□□□□□ -1.33
COL4A3BPQ9Y5P4 DNAJC19P6-201ENST00000401853 280 ntBASIC6.76□□□□□ -1.33
COL4A3BPQ9Y5P4 AC013404.1-201ENST00000413068 249 ntBASIC6.76□□□□□ -1.33
COL4A3BPQ9Y5P4 AL096829.1-201ENST00000413677 457 ntBASIC6.76□□□□□ -1.33
COL4A3BPQ9Y5P4 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.76□□□□□ -1.33
COL4A3BPQ9Y5P4 AC066692.1-201ENST00000421721 457 ntBASIC6.76□□□□□ -1.33
COL4A3BPQ9Y5P4 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.76□□□□□ -1.33
COL4A3BPQ9Y5P4 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC6.76□□□□□ -1.33
COL4A3BPQ9Y5P4 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC6.76□□□□□ -1.33
COL4A3BPQ9Y5P4 FTH1P16-201ENST00000435241 552 ntBASIC6.76□□□□□ -1.33
COL4A3BPQ9Y5P4 AP000936.3-201ENST00000438127 255 ntBASIC6.76□□□□□ -1.33
COL4A3BPQ9Y5P4 AC092106.1-201ENST00000444291 373 ntBASIC6.76□□□□□ -1.33
COL4A3BPQ9Y5P4 AL512593.1-201ENST00000444758 779 ntBASIC6.76□□□□□ -1.33
COL4A3BPQ9Y5P4 ZNF619P1-201ENST00000446539 752 ntBASIC6.76□□□□□ -1.33
COL4A3BPQ9Y5P4 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
COL4A3BPQ9Y5P4 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.76□□□□□ -1.33
COL4A3BPQ9Y5P4 CCNB1IP1P3-201ENST00000454702 829 ntBASIC6.76□□□□□ -1.33
COL4A3BPQ9Y5P4 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC6.76□□□□□ -1.33
COL4A3BPQ9Y5P4 TPT1P1-201ENST00000458495 518 ntBASIC6.76□□□□□ -1.33
COL4A3BPQ9Y5P4 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC6.76□□□□□ -1.33
COL4A3BPQ9Y5P4 GTF2IP9-201ENST00000502460 301 ntBASIC6.76□□□□□ -1.33
COL4A3BPQ9Y5P4 TRAV31-201ENST00000502780 342 ntBASIC6.76□□□□□ -1.33
COL4A3BPQ9Y5P4 AC026414.1-201ENST00000504046 698 ntBASIC6.76□□□□□ -1.33
COL4A3BPQ9Y5P4 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC6.76□□□□□ -1.33
COL4A3BPQ9Y5P4 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.76□□□□□ -1.33
COL4A3BPQ9Y5P4 RNA5SP116-201ENST00000516132 98 ntBASIC6.76□□□□□ -1.33
COL4A3BPQ9Y5P4 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC6.76□□□□□ -1.33
COL4A3BPQ9Y5P4 IGKV2D-10-201ENST00000520194 281 ntBASIC6.76□□□□□ -1.33
COL4A3BPQ9Y5P4 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.76□□□□□ -1.33
COL4A3BPQ9Y5P4 AP003396.4-201ENST00000527574 265 ntBASIC6.76□□□□□ -1.33
COL4A3BPQ9Y5P4 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC6.76□□□□□ -1.33
COL4A3BPQ9Y5P4 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC6.76□□□□□ -1.33
COL4A3BPQ9Y5P4 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC6.76□□□□□ -1.33
COL4A3BPQ9Y5P4 RPA2P1-201ENST00000556557 721 ntBASIC6.76□□□□□ -1.33
COL4A3BPQ9Y5P4 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC6.76□□□□□ -1.33
COL4A3BPQ9Y5P4 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC6.76□□□□□ -1.33
COL4A3BPQ9Y5P4 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.76□□□□□ -1.33
COL4A3BPQ9Y5P4 AC004890.3-201ENST00000605566 1095 ntBASIC6.76□□□□□ -1.33
COL4A3BPQ9Y5P4 AC034229.4-201ENST00000607861 441 ntBASIC6.76□□□□□ -1.33
COL4A3BPQ9Y5P4 FRG1HP-204ENST00000617940 757 ntBASIC6.76□□□□□ -1.33
COL4A3BPQ9Y5P4 AC245014.3-201ENST00000618589 347 ntBASIC6.76□□□□□ -1.33
COL4A3BPQ9Y5P4 AC022079.2-201ENST00000619739 566 ntBASIC6.76□□□□□ -1.33
COL4A3BPQ9Y5P4 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC6.76□□□□□ -1.33
COL4A3BPQ9Y5P4 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC6.76□□□□□ -1.33
COL4A3BPQ9Y5P4 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC6.76□□□□□ -1.33
COL4A3BPQ9Y5P4 AL590396.4-201ENST00000636779 956 ntBASIC6.76□□□□□ -1.33
COL4A3BPQ9Y5P4 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
COL4A3BPQ9Y5P4 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC6.76□□□□□ -1.33
COL4A3BPQ9Y5P4 AC073365.1-203ENST00000641055 1992 ntBASIC6.76□□□□□ -1.33
COL4A3BPQ9Y5P4 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
COL4A3BPQ9Y5P4 AL731532.1-201ENST00000623972 4236 ntBASIC6.76□□□□□ -1.33
COL4A3BPQ9Y5P4 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL4A3BPQ9Y5P4 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL4A3BPQ9Y5P4 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.76□□□□□ -1.33
COL4A3BPQ9Y5P4 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.76□□□□□ -1.33
COL4A3BPQ9Y5P4 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL4A3BPQ9Y5P4 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL4A3BPQ9Y5P4 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
COL4A3BPQ9Y5P4 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
COL4A3BPQ9Y5P4 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
COL4A3BPQ9Y5P4 DDX18P4-201ENST00000511690 1966 ntBASIC6.75□□□□□ -1.33
COL4A3BPQ9Y5P4 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
COL4A3BPQ9Y5P4 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
COL4A3BPQ9Y5P4 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.75□□□□□ -1.33
COL4A3BPQ9Y5P4 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.75□□□□□ -1.33
COL4A3BPQ9Y5P4 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.33
COL4A3BPQ9Y5P4 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.75□□□□□ -1.33
COL4A3BPQ9Y5P4 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.75□□□□□ -1.33
COL4A3BPQ9Y5P4 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.75□□□□□ -1.33
COL4A3BPQ9Y5P4 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
COL4A3BPQ9Y5P4 RNU1-59P-201ENST00000364829 162 ntBASIC6.75□□□□□ -1.33
COL4A3BPQ9Y5P4 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.75□□□□□ -1.33
COL4A3BPQ9Y5P4 RPL23AP17-201ENST00000401064 499 ntBASIC6.75□□□□□ -1.33
COL4A3BPQ9Y5P4 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC6.75□□□□□ -1.33
COL4A3BPQ9Y5P4 PTCD2P2-201ENST00000415579 1095 ntBASIC6.75□□□□□ -1.33
COL4A3BPQ9Y5P4 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.75□□□□□ -1.33
COL4A3BPQ9Y5P4 LINC01881-201ENST00000416103 412 ntBASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms