Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
PCDHGA11Q9Y5H2 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC7.27□□□□□ -1.25
PCDHGA11Q9Y5H2 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
PCDHGA11Q9Y5H2 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
PCDHGA11Q9Y5H2 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC7.27□□□□□ -1.25
PCDHGA11Q9Y5H2 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC7.27□□□□□ -1.25
PCDHGA11Q9Y5H2 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC7.27□□□□□ -1.25
PCDHGA11Q9Y5H2 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC7.27□□□□□ -1.25
PCDHGA11Q9Y5H2 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC7.27□□□□□ -1.25
PCDHGA11Q9Y5H2 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
PCDHGA11Q9Y5H2 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
PCDHGA11Q9Y5H2 SNORD116-23-201ENST00000384645 92 ntBASIC7.27□□□□□ -1.25
PCDHGA11Q9Y5H2 MIR575-201ENST00000385013 94 ntBASIC7.27□□□□□ -1.25
PCDHGA11Q9Y5H2 AC092952.1-201ENST00000397646 1209 ntBASIC7.27□□□□□ -1.25
PCDHGA11Q9Y5H2 AL139128.1-201ENST00000413921 941 ntBASIC7.27□□□□□ -1.25
PCDHGA11Q9Y5H2 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
PCDHGA11Q9Y5H2 ATP5HP2-201ENST00000433885 485 ntBASIC7.27□□□□□ -1.25
PCDHGA11Q9Y5H2 AC007677.1-201ENST00000445757 515 ntBASIC7.27□□□□□ -1.25
PCDHGA11Q9Y5H2 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC7.27□□□□□ -1.25
PCDHGA11Q9Y5H2 AL590365.1-201ENST00000450788 243 ntBASIC7.27□□□□□ -1.25
PCDHGA11Q9Y5H2 RPS29P5-201ENST00000452777 171 ntBASIC7.27□□□□□ -1.25
PCDHGA11Q9Y5H2 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC7.27□□□□□ -1.25
PCDHGA11Q9Y5H2 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
PCDHGA11Q9Y5H2 RN7SL608P-201ENST00000492377 279 ntBASIC7.27□□□□□ -1.25
PCDHGA11Q9Y5H2 LEMD1-208ENST00000495594 637 ntTSL 3 BASIC7.27□□□□□ -1.25
PCDHGA11Q9Y5H2 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC7.27□□□□□ -1.25
PCDHGA11Q9Y5H2 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC7.27□□□□□ -1.25
PCDHGA11Q9Y5H2 AC023794.3-204ENST00000510754 236 ntBASIC7.27□□□□□ -1.25
PCDHGA11Q9Y5H2 KCTD9P2-201ENST00000512203 1013 ntBASIC7.27□□□□□ -1.25
PCDHGA11Q9Y5H2 RNU6-583P-201ENST00000516012 92 ntBASIC7.27□□□□□ -1.25
PCDHGA11Q9Y5H2 Y_RNA.704-201ENST00000516851 102 ntBASIC7.27□□□□□ -1.25
PCDHGA11Q9Y5H2 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC7.27□□□□□ -1.25
PCDHGA11Q9Y5H2 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC7.27□□□□□ -1.25
PCDHGA11Q9Y5H2 ANAPC15-211ENST00000542531 812 ntAPPRIS P3 TSL 5 BASIC7.27□□□□□ -1.25
PCDHGA11Q9Y5H2 AC079362.1-202ENST00000547089 278 ntTSL 3 BASIC7.27□□□□□ -1.25
PCDHGA11Q9Y5H2 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
PCDHGA11Q9Y5H2 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
PCDHGA11Q9Y5H2 AC002519.2-203ENST00000567043 837 ntBASIC7.27□□□□□ -1.25
PCDHGA11Q9Y5H2 TUBAP4-201ENST00000569261 416 ntBASIC7.27□□□□□ -1.25
PCDHGA11Q9Y5H2 AC015674.1-201ENST00000578482 267 ntBASIC7.27□□□□□ -1.25
PCDHGA11Q9Y5H2 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC7.27□□□□□ -1.25
PCDHGA11Q9Y5H2 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC7.27□□□□□ -1.25
PCDHGA11Q9Y5H2 ZNF85-206ENST00000596476 1259 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
PCDHGA11Q9Y5H2 AC019193.2-201ENST00000610012 634 ntBASIC7.27□□□□□ -1.25
PCDHGA11Q9Y5H2 MIAT_exon1.1-201ENST00000617016 135 ntBASIC7.27□□□□□ -1.25
PCDHGA11Q9Y5H2 AC116563.2-201ENST00000624751 535 ntBASIC7.27□□□□□ -1.25
PCDHGA11Q9Y5H2 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC7.27□□□□□ -1.25
PCDHGA11Q9Y5H2 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
PCDHGA11Q9Y5H2 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
PCDHGA11Q9Y5H2 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC7.27□□□□□ -1.25
PCDHGA11Q9Y5H2 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC7.27□□□□□ -1.25
PCDHGA11Q9Y5H2 CASC23-201ENST00000534076 1563 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
PCDHGA11Q9Y5H2 CENPN-205ENST00000439957 1699 ntTSL 2 BASIC7.27□□□□□ -1.25
PCDHGA11Q9Y5H2 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
PCDHGA11Q9Y5H2 OR2A3P-202ENST00000641249 1776 ntBASIC7.27□□□□□ -1.25
PCDHGA11Q9Y5H2 HSPA8P11-201ENST00000508840 1898 ntBASIC7.27□□□□□ -1.25
PCDHGA11Q9Y5H2 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
PCDHGA11Q9Y5H2 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
PCDHGA11Q9Y5H2 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
PCDHGA11Q9Y5H2 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
PCDHGA11Q9Y5H2 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
PCDHGA11Q9Y5H2 NBPF14-201ENST00000581201 2931 ntTSL 5 BASIC7.27□□□□□ -1.25
PCDHGA11Q9Y5H2 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC7.27□□□□□ -1.25
PCDHGA11Q9Y5H2 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC7.27□□□□□ -1.25
PCDHGA11Q9Y5H2 AL117339.4-201ENST00000608335 7063 ntBASIC7.27□□□□□ -1.25
PCDHGA11Q9Y5H2 AIFM1-205ENST00000460436 1925 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
PCDHGA11Q9Y5H2 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC7.27□□□□□ -1.25
PCDHGA11Q9Y5H2 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
PCDHGA11Q9Y5H2 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC7.26□□□□□ -1.25
PCDHGA11Q9Y5H2 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC7.26□□□□□ -1.25
PCDHGA11Q9Y5H2 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC7.26□□□□□ -1.25
PCDHGA11Q9Y5H2 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC7.26□□□□□ -1.25
PCDHGA11Q9Y5H2 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC7.26□□□□□ -1.25
PCDHGA11Q9Y5H2 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
PCDHGA11Q9Y5H2 AC245100.2-201ENST00000454544 1679 ntBASIC7.26□□□□□ -1.25
PCDHGA11Q9Y5H2 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
PCDHGA11Q9Y5H2 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
PCDHGA11Q9Y5H2 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
PCDHGA11Q9Y5H2 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
PCDHGA11Q9Y5H2 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC7.26□□□□□ -1.25
PCDHGA11Q9Y5H2 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC7.26□□□□□ -1.25
PCDHGA11Q9Y5H2 HSPA8P17-201ENST00000427029 1382 ntBASIC7.26□□□□□ -1.25
PCDHGA11Q9Y5H2 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC7.26□□□□□ -1.25
PCDHGA11Q9Y5H2 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC7.26□□□□□ -1.25
PCDHGA11Q9Y5H2 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
PCDHGA11Q9Y5H2 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
PCDHGA11Q9Y5H2 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
PCDHGA11Q9Y5H2 Y_RNA.162-201ENST00000363683 102 ntBASIC7.26□□□□□ -1.25
PCDHGA11Q9Y5H2 RNA5SP79-201ENST00000365193 109 ntBASIC7.26□□□□□ -1.25
PCDHGA11Q9Y5H2 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
PCDHGA11Q9Y5H2 Y_RNA.460-201ENST00000384255 102 ntBASIC7.26□□□□□ -1.25
PCDHGA11Q9Y5H2 MIR498-201ENST00000385134 124 ntBASIC7.26□□□□□ -1.25
PCDHGA11Q9Y5H2 DNAJA1P4-201ENST00000406473 1166 ntBASIC7.26□□□□□ -1.25
PCDHGA11Q9Y5H2 AL451061.1-201ENST00000407887 862 ntBASIC7.26□□□□□ -1.25
PCDHGA11Q9Y5H2 MIR1302-11-201ENST00000408051 138 ntBASIC7.26□□□□□ -1.25
PCDHGA11Q9Y5H2 MIR1302-9-201ENST00000408365 138 ntBASIC7.26□□□□□ -1.25
PCDHGA11Q9Y5H2 MIR1302-10-201ENST00000408734 138 ntBASIC7.26□□□□□ -1.25
PCDHGA11Q9Y5H2 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC7.26□□□□□ -1.25
PCDHGA11Q9Y5H2 BX295541.1-201ENST00000417774 250 ntBASIC7.26□□□□□ -1.25
PCDHGA11Q9Y5H2 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC7.26□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms