Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RCL1Q9Y2P8 AP000542.2-201ENST00000623199 6179 ntBASIC4.42□□□□□ -1.7
RCL1Q9Y2P8 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.42□□□□□ -1.7
RCL1Q9Y2P8 STX3-208ENST00000641815 3236 ntBASIC4.42□□□□□ -1.7
RCL1Q9Y2P8 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.42□□□□□ -1.7
RCL1Q9Y2P8 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RCL1Q9Y2P8 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.42□□□□□ -1.7
RCL1Q9Y2P8 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RCL1Q9Y2P8 VPS35P1-201ENST00000563400 1518 ntBASIC4.41□□□□□ -1.7
RCL1Q9Y2P8 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
RCL1Q9Y2P8 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
RCL1Q9Y2P8 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
RCL1Q9Y2P8 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.41□□□□□ -1.7
RCL1Q9Y2P8 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.41□□□□□ -1.7
RCL1Q9Y2P8 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
RCL1Q9Y2P8 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RCL1Q9Y2P8 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.41□□□□□ -1.7
RCL1Q9Y2P8 OR9G4-201ENST00000302957 984 ntBASIC4.41□□□□□ -1.7
RCL1Q9Y2P8 METTL5-202ENST00000308099 629 ntTSL 3 BASIC4.41□□□□□ -1.7
RCL1Q9Y2P8 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC4.41□□□□□ -1.7
RCL1Q9Y2P8 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RCL1Q9Y2P8 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
RCL1Q9Y2P8 MIR130B-202ENST00000385018 82 ntBASIC4.41□□□□□ -1.7
RCL1Q9Y2P8 MT-RNR1-201ENST00000389680 954 ntBASIC4.41□□□□□ -1.7
RCL1Q9Y2P8 AL133260.1-201ENST00000405720 405 ntBASIC4.41□□□□□ -1.7
RCL1Q9Y2P8 RN7SKP146-201ENST00000410242 334 ntBASIC4.41□□□□□ -1.7
RCL1Q9Y2P8 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.41□□□□□ -1.7
RCL1Q9Y2P8 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC4.41□□□□□ -1.7
RCL1Q9Y2P8 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC4.41□□□□□ -1.7
RCL1Q9Y2P8 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC4.41□□□□□ -1.7
RCL1Q9Y2P8 AC104333.2-201ENST00000422630 192 ntBASIC4.41□□□□□ -1.7
RCL1Q9Y2P8 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC4.41□□□□□ -1.7
RCL1Q9Y2P8 MTND6P12-201ENST00000428247 522 ntBASIC4.41□□□□□ -1.7
RCL1Q9Y2P8 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.41□□□□□ -1.7
RCL1Q9Y2P8 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.41□□□□□ -1.7
RCL1Q9Y2P8 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
RCL1Q9Y2P8 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC4.41□□□□□ -1.7
RCL1Q9Y2P8 AC006335.2-201ENST00000437993 330 ntBASIC4.41□□□□□ -1.7
RCL1Q9Y2P8 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC4.41□□□□□ -1.7
RCL1Q9Y2P8 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC4.41□□□□□ -1.7
RCL1Q9Y2P8 AC073909.1-201ENST00000447112 999 ntBASIC4.41□□□□□ -1.7
RCL1Q9Y2P8 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.41□□□□□ -1.7
RCL1Q9Y2P8 OR6C72P-201ENST00000451403 892 ntBASIC4.41□□□□□ -1.7
RCL1Q9Y2P8 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC4.41□□□□□ -1.7
RCL1Q9Y2P8 RPSAP37-201ENST00000470913 821 ntBASIC4.41□□□□□ -1.7
RCL1Q9Y2P8 AC098847.1-201ENST00000473094 348 ntBASIC4.41□□□□□ -1.7
RCL1Q9Y2P8 RPS24P16-201ENST00000497294 392 ntBASIC4.41□□□□□ -1.7
RCL1Q9Y2P8 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.41□□□□□ -1.7
RCL1Q9Y2P8 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.41□□□□□ -1.7
RCL1Q9Y2P8 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC4.41□□□□□ -1.7
RCL1Q9Y2P8 SNORD116-30-201ENST00000516468 85 ntBASIC4.41□□□□□ -1.7
RCL1Q9Y2P8 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC4.41□□□□□ -1.7
RCL1Q9Y2P8 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC4.41□□□□□ -1.7
RCL1Q9Y2P8 HMGN2P36-201ENST00000529541 409 ntBASIC4.41□□□□□ -1.7
RCL1Q9Y2P8 BTG1P1-201ENST00000540396 508 ntBASIC4.41□□□□□ -1.7
RCL1Q9Y2P8 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC4.41□□□□□ -1.7
RCL1Q9Y2P8 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.41□□□□□ -1.7
RCL1Q9Y2P8 AL356801.1-201ENST00000559320 294 ntBASIC4.41□□□□□ -1.7
RCL1Q9Y2P8 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.41□□□□□ -1.7
RCL1Q9Y2P8 AL078601.3-201ENST00000573303 535 ntBASIC4.41□□□□□ -1.7
RCL1Q9Y2P8 AC022884.2-201ENST00000578535 580 ntBASIC4.41□□□□□ -1.7
RCL1Q9Y2P8 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC4.41□□□□□ -1.7
RCL1Q9Y2P8 MIR3936-201ENST00000584304 110 ntBASIC4.41□□□□□ -1.7
RCL1Q9Y2P8 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.41□□□□□ -1.7
RCL1Q9Y2P8 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.41□□□□□ -1.7
RCL1Q9Y2P8 FAM27E4-201ENST00000605259 342 ntBASIC4.41□□□□□ -1.7
RCL1Q9Y2P8 AC037198.3-201ENST00000616754 526 ntBASIC4.41□□□□□ -1.7
RCL1Q9Y2P8 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RCL1Q9Y2P8 AP001005.3-201ENST00000622049 129 ntBASIC4.41□□□□□ -1.7
RCL1Q9Y2P8 MTCO1P1-201ENST00000624263 1081 ntBASIC4.41□□□□□ -1.7
RCL1Q9Y2P8 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC4.41□□□□□ -1.7
RCL1Q9Y2P8 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC4.41□□□□□ -1.7
RCL1Q9Y2P8 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
RCL1Q9Y2P8 AC079298.1-201ENST00000625026 1619 ntBASIC4.41□□□□□ -1.7
RCL1Q9Y2P8 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC4.41□□□□□ -1.7
RCL1Q9Y2P8 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RCL1Q9Y2P8 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC4.41□□□□□ -1.7
RCL1Q9Y2P8 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.41□□□□□ -1.7
RCL1Q9Y2P8 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RCL1Q9Y2P8 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
RCL1Q9Y2P8 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RCL1Q9Y2P8 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.7
RCL1Q9Y2P8 AL354854.1-201ENST00000455940 1363 ntBASIC4.4□□□□□ -1.7
RCL1Q9Y2P8 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
RCL1Q9Y2P8 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
RCL1Q9Y2P8 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
RCL1Q9Y2P8 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.4□□□□□ -1.7
RCL1Q9Y2P8 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.4□□□□□ -1.7
RCL1Q9Y2P8 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.4□□□□□ -1.71
RCL1Q9Y2P8 RNU1-19P-201ENST00000363306 165 ntBASIC4.4□□□□□ -1.71
RCL1Q9Y2P8 SNORA51.9-201ENST00000384295 124 ntBASIC4.4□□□□□ -1.71
RCL1Q9Y2P8 RNA5SP105-201ENST00000391123 113 ntBASIC4.4□□□□□ -1.71
RCL1Q9Y2P8 RPL5P19-201ENST00000404228 893 ntBASIC4.4□□□□□ -1.71
RCL1Q9Y2P8 RN7SKP16-201ENST00000410180 299 ntBASIC4.4□□□□□ -1.71
RCL1Q9Y2P8 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC4.4□□□□□ -1.71
RCL1Q9Y2P8 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC4.4□□□□□ -1.71
RCL1Q9Y2P8 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC4.4□□□□□ -1.71
RCL1Q9Y2P8 OR6C71P-201ENST00000432580 913 ntBASIC4.4□□□□□ -1.71
RCL1Q9Y2P8 UBE2V2P1-201ENST00000434717 398 ntBASIC4.4□□□□□ -1.71
RCL1Q9Y2P8 AC046176.1-201ENST00000435260 1170 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms