Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC8.09□□□□□ -1.11
VPS9D1Q9Y2B5 TMSB10P1-201ENST00000415070 132 ntBASIC8.09□□□□□ -1.11
VPS9D1Q9Y2B5 AC019181.1-201ENST00000417151 310 ntBASIC8.09□□□□□ -1.11
VPS9D1Q9Y2B5 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC8.09□□□□□ -1.11
VPS9D1Q9Y2B5 FABP7P2-201ENST00000429946 379 ntBASIC8.09□□□□□ -1.11
VPS9D1Q9Y2B5 CYP4F26P-202ENST00000433357 852 ntTSL 5 BASIC8.09□□□□□ -1.11
VPS9D1Q9Y2B5 MTND5P15-201ENST00000434246 349 ntBASIC8.09□□□□□ -1.11
VPS9D1Q9Y2B5 LSM1P1-201ENST00000438629 273 ntBASIC8.09□□□□□ -1.11
VPS9D1Q9Y2B5 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
VPS9D1Q9Y2B5 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC8.09□□□□□ -1.11
VPS9D1Q9Y2B5 AC104308.1-201ENST00000454621 333 ntBASIC8.09□□□□□ -1.11
VPS9D1Q9Y2B5 PCMTD1P1-201ENST00000455560 355 ntBASIC8.09□□□□□ -1.11
VPS9D1Q9Y2B5 PET100-201ENST00000456958 219 ntTSL 2 BASIC8.09□□□□□ -1.11
VPS9D1Q9Y2B5 AC007547.2-201ENST00000468802 360 ntBASIC8.09□□□□□ -1.11
VPS9D1Q9Y2B5 RN7SL107P-201ENST00000478127 283 ntBASIC8.09□□□□□ -1.11
VPS9D1Q9Y2B5 RPL38P3-201ENST00000484463 213 ntBASIC8.09□□□□□ -1.11
VPS9D1Q9Y2B5 RN7SL130P-201ENST00000489463 305 ntBASIC8.09□□□□□ -1.11
VPS9D1Q9Y2B5 AC008799.1-201ENST00000495909 457 ntBASIC8.09□□□□□ -1.11
VPS9D1Q9Y2B5 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC8.09□□□□□ -1.11
VPS9D1Q9Y2B5 ENPP7P10-201ENST00000504828 933 ntBASIC8.09□□□□□ -1.11
VPS9D1Q9Y2B5 RNU2-53P-201ENST00000516257 147 ntBASIC8.09□□□□□ -1.11
VPS9D1Q9Y2B5 RNU6-1261P-201ENST00000517194 104 ntBASIC8.09□□□□□ -1.11
VPS9D1Q9Y2B5 SNRPCP14-201ENST00000524498 205 ntBASIC8.09□□□□□ -1.11
VPS9D1Q9Y2B5 AC022239.1-201ENST00000527922 435 ntTSL 5 BASIC8.09□□□□□ -1.11
VPS9D1Q9Y2B5 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC8.09□□□□□ -1.11
VPS9D1Q9Y2B5 AC025260.1-201ENST00000548858 430 ntBASIC8.09□□□□□ -1.11
VPS9D1Q9Y2B5 LINC01588-211ENST00000556434 892 ntTSL 5 BASIC8.09□□□□□ -1.11
VPS9D1Q9Y2B5 OR11J5P-201ENST00000556889 934 ntBASIC8.09□□□□□ -1.11
VPS9D1Q9Y2B5 TEX46-202ENST00000566855 510 ntAPPRIS P2 TSL 2 BASIC8.09□□□□□ -1.11
VPS9D1Q9Y2B5 AC099489.2-201ENST00000574976 260 ntBASIC8.09□□□□□ -1.11
VPS9D1Q9Y2B5 AC093826.2-201ENST00000579042 108 ntBASIC8.09□□□□□ -1.11
VPS9D1Q9Y2B5 AC005180.1-201ENST00000591137 587 ntTSL 4 BASIC8.09□□□□□ -1.11
VPS9D1Q9Y2B5 AC068020.1-201ENST00000594215 661 ntBASIC8.09□□□□□ -1.11
VPS9D1Q9Y2B5 RPL26P30-202ENST00000602923 645 ntBASIC8.09□□□□□ -1.11
VPS9D1Q9Y2B5 AC130352.1-201ENST00000602979 661 ntBASIC8.09□□□□□ -1.11
VPS9D1Q9Y2B5 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC8.09□□□□□ -1.11
VPS9D1Q9Y2B5 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC8.09□□□□□ -1.11
VPS9D1Q9Y2B5 TTR-205ENST00000613781 556 ntTSL 5 BASIC8.09□□□□□ -1.11
VPS9D1Q9Y2B5 ST7-OT4_3.1-201ENST00000615542 293 ntBASIC8.09□□□□□ -1.11
VPS9D1Q9Y2B5 AC245041.1-201ENST00000619523 826 ntTSL 3 BASIC8.09□□□□□ -1.11
VPS9D1Q9Y2B5 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC8.09□□□□□ -1.11
VPS9D1Q9Y2B5 PACRG-211ENST00000621363 360 ntTSL 5 BASIC8.09□□□□□ -1.11
VPS9D1Q9Y2B5 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
VPS9D1Q9Y2B5 NEK10-201ENST00000295720 2871 ntTSL 2 BASIC8.09□□□□□ -1.11
VPS9D1Q9Y2B5 MGC27382-202ENST00000436742 1993 ntTSL 2 BASIC8.09□□□□□ -1.11
VPS9D1Q9Y2B5 SCARB2-211ENST00000638603 4284 ntTSL 5 BASIC8.09□□□□□ -1.11
VPS9D1Q9Y2B5 USP48-203ENST00000374732 3037 ntTSL 2 BASIC8.09□□□□□ -1.11
VPS9D1Q9Y2B5 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
VPS9D1Q9Y2B5 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
VPS9D1Q9Y2B5 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
VPS9D1Q9Y2B5 PIWIL4-201ENST00000299001 3199 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
VPS9D1Q9Y2B5 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
VPS9D1Q9Y2B5 AC004947.1-201ENST00000420912 2781 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
VPS9D1Q9Y2B5 LUARIS-201ENST00000436105 2916 ntTSL 1 (best) BASIC8.09□□□□□ -1.12
VPS9D1Q9Y2B5 HPS4-201ENST00000336873 3786 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.12
VPS9D1Q9Y2B5 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.12
VPS9D1Q9Y2B5 WDR75-201ENST00000314761 2701 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.12
VPS9D1Q9Y2B5 RAD51B-211ENST00000487861 1673 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 MAP3K20-208ENST00000539448 2312 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 AF228730.7-203ENST00000641436 1804 ntBASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 PCDH18-205ENST00000511115 1331 ntTSL 2 BASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 ACTR3BP2-202ENST00000623630 1338 ntBASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 NR3C2-207ENST00000511528 2967 ntTSL 5 BASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 SULT1C2-201ENST00000251481 2795 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 SLC9A6-214ENST00000637581 4872 ntTSL 5 BASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 LRRC37A11P-202ENST00000579258 3717 ntBASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 PDIK1L-201ENST00000374269 2566 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 AC004148.2-201ENST00000575890 1938 ntTSL 5 BASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 GULP1-202ENST00000409580 3544 ntAPPRIS P3 TSL 2 BASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 FAM122C-211ENST00000623326 2064 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 FO393411.1-201ENST00000325612 420 ntBASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 FCAR-201ENST00000345937 608 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 RNU6-874P-201ENST00000362390 105 ntBASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 FANK1-201ENST00000368689 522 ntTSL 3 BASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 GCG-201ENST00000375497 799 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 AC074254.1-201ENST00000399152 404 ntTSL 5 BASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 AL390316.1-201ENST00000406279 553 ntBASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 AC023669.1-201ENST00000414915 524 ntTSL 3 BASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 AC008937.2-201ENST00000415589 619 ntTSL 3 BASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 AC111200.2-201ENST00000418877 505 ntBASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 AC023347.2-201ENST00000433994 462 ntBASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 FANK1-AS1-201ENST00000445458 428 ntTSL 3 BASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 HSFY6P-201ENST00000445573 403 ntBASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 AC002366.1-201ENST00000446186 1190 ntBASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 AL590369.1-201ENST00000455074 470 ntTSL 2 BASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 AC113208.1-201ENST00000497944 318 ntBASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 FAM206BP-201ENST00000510179 541 ntBASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 RNA5SP460-201ENST00000516789 100 ntBASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 RNU6-1003P-201ENST00000517099 105 ntBASIC8.08□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms