Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.56□□□□□ -1.52
SPASTQ9UBP0 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.56□□□□□ -1.52
SPASTQ9UBP0 IMMP1LP3-201ENST00000604197 224 ntBASIC5.56□□□□□ -1.52
SPASTQ9UBP0 AC005840.5-201ENST00000619166 599 ntBASIC5.56□□□□□ -1.52
SPASTQ9UBP0 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.56□□□□□ -1.52
SPASTQ9UBP0 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.56□□□□□ -1.52
SPASTQ9UBP0 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.56□□□□□ -1.52
SPASTQ9UBP0 CASC19-264ENST00000641912 1184 ntBASIC5.56□□□□□ -1.52
SPASTQ9UBP0 AC068870.3-201ENST00000625077 2536 ntBASIC5.56□□□□□ -1.52
SPASTQ9UBP0 AC011933.2-201ENST00000578539 2790 ntBASIC5.56□□□□□ -1.52
SPASTQ9UBP0 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SPASTQ9UBP0 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.56□□□□□ -1.52
SPASTQ9UBP0 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
SPASTQ9UBP0 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SPASTQ9UBP0 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SPASTQ9UBP0 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.56□□□□□ -1.52
SPASTQ9UBP0 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.56□□□□□ -1.52
SPASTQ9UBP0 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
SPASTQ9UBP0 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.55□□□□□ -1.52
SPASTQ9UBP0 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.55□□□□□ -1.52
SPASTQ9UBP0 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SPASTQ9UBP0 MIR133A2-201ENST00000347538 102 ntBASIC5.55□□□□□ -1.52
SPASTQ9UBP0 RN7SKP28-201ENST00000364770 305 ntBASIC5.55□□□□□ -1.52
SPASTQ9UBP0 OR13C3-201ENST00000374781 1108 ntBASIC5.55□□□□□ -1.52
SPASTQ9UBP0 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.55□□□□□ -1.52
SPASTQ9UBP0 RNU6-729P-201ENST00000384399 107 ntBASIC5.55□□□□□ -1.52
SPASTQ9UBP0 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.55□□□□□ -1.52
SPASTQ9UBP0 RPS6P23-201ENST00000413224 722 ntBASIC5.55□□□□□ -1.52
SPASTQ9UBP0 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.55□□□□□ -1.52
SPASTQ9UBP0 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.55□□□□□ -1.52
SPASTQ9UBP0 SEPT7P3-201ENST00000455017 621 ntBASIC5.55□□□□□ -1.52
SPASTQ9UBP0 RANP1-206ENST00000455094 651 ntBASIC5.55□□□□□ -1.52
SPASTQ9UBP0 OR7L1P-201ENST00000456181 380 ntBASIC5.55□□□□□ -1.52
SPASTQ9UBP0 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.55□□□□□ -1.52
SPASTQ9UBP0 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.55□□□□□ -1.52
SPASTQ9UBP0 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.55□□□□□ -1.52
SPASTQ9UBP0 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SPASTQ9UBP0 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.55□□□□□ -1.52
SPASTQ9UBP0 AC004825.1-201ENST00000555068 586 ntBASIC5.55□□□□□ -1.52
SPASTQ9UBP0 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SPASTQ9UBP0 MIR1269B-201ENST00000580405 75 ntBASIC5.55□□□□□ -1.52
SPASTQ9UBP0 FKBP1AP1-201ENST00000594588 318 ntBASIC5.55□□□□□ -1.52
SPASTQ9UBP0 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SPASTQ9UBP0 SUGT1P3-202ENST00000604259 383 ntBASIC5.55□□□□□ -1.52
SPASTQ9UBP0 AC211433.2-201ENST00000608433 387 ntBASIC5.55□□□□□ -1.52
SPASTQ9UBP0 AC008115.4-201ENST00000619780 775 ntBASIC5.55□□□□□ -1.52
SPASTQ9UBP0 AC132068.1-201ENST00000623805 459 ntBASIC5.55□□□□□ -1.52
SPASTQ9UBP0 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
SPASTQ9UBP0 SAMMSON-209ENST00000641222 1100 ntBASIC5.55□□□□□ -1.52
SPASTQ9UBP0 AC079776.5-201ENST00000641920 211 ntBASIC5.55□□□□□ -1.52
SPASTQ9UBP0 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SPASTQ9UBP0 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
SPASTQ9UBP0 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SPASTQ9UBP0 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.55□□□□□ -1.52
SPASTQ9UBP0 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SPASTQ9UBP0 AC107021.2-201ENST00000567714 2095 ntBASIC5.55□□□□□ -1.52
SPASTQ9UBP0 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
SPASTQ9UBP0 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SPASTQ9UBP0 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
SPASTQ9UBP0 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.55□□□□□ -1.52
SPASTQ9UBP0 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SPASTQ9UBP0 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SPASTQ9UBP0 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SPASTQ9UBP0 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SPASTQ9UBP0 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.54□□□□□ -1.52
SPASTQ9UBP0 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
SPASTQ9UBP0 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.54□□□□□ -1.52
SPASTQ9UBP0 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
SPASTQ9UBP0 AL353625.1-202ENST00000366273 571 ntBASIC5.54□□□□□ -1.52
SPASTQ9UBP0 MIR130A-201ENST00000385274 89 ntBASIC5.54□□□□□ -1.52
SPASTQ9UBP0 SNORA79B-201ENST00000410557 148 ntBASIC5.54□□□□□ -1.52
SPASTQ9UBP0 MGAT2P2-201ENST00000427194 797 ntBASIC5.54□□□□□ -1.52
SPASTQ9UBP0 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.54□□□□□ -1.52
SPASTQ9UBP0 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.54□□□□□ -1.52
SPASTQ9UBP0 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.54□□□□□ -1.52
SPASTQ9UBP0 RPL12P39-201ENST00000455456 496 ntBASIC5.54□□□□□ -1.52
SPASTQ9UBP0 AC011225.1-201ENST00000457751 369 ntBASIC5.54□□□□□ -1.52
SPASTQ9UBP0 COPS8P2-201ENST00000473228 627 ntBASIC5.54□□□□□ -1.52
SPASTQ9UBP0 RN7SL799P-201ENST00000475891 298 ntBASIC5.54□□□□□ -1.52
SPASTQ9UBP0 RN7SL30P-201ENST00000488416 306 ntBASIC5.54□□□□□ -1.52
SPASTQ9UBP0 AC090638.1-201ENST00000498296 909 ntBASIC5.54□□□□□ -1.52
SPASTQ9UBP0 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.54□□□□□ -1.52
SPASTQ9UBP0 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.54□□□□□ -1.52
SPASTQ9UBP0 OR8Q1P-201ENST00000526467 655 ntBASIC5.54□□□□□ -1.52
SPASTQ9UBP0 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SPASTQ9UBP0 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.54□□□□□ -1.52
SPASTQ9UBP0 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.54□□□□□ -1.52
SPASTQ9UBP0 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SPASTQ9UBP0 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.54□□□□□ -1.52
SPASTQ9UBP0 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SPASTQ9UBP0 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SPASTQ9UBP0 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
SPASTQ9UBP0 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.54□□□□□ -1.52
SPASTQ9UBP0 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SPASTQ9UBP0 AL158152.1-201ENST00000602652 1435 ntBASIC5.54□□□□□ -1.52
SPASTQ9UBP0 AC114774.1-201ENST00000507410 1770 ntBASIC5.54□□□□□ -1.52
SPASTQ9UBP0 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.54□□□□□ -1.52
SPASTQ9UBP0 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SPASTQ9UBP0 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SPASTQ9UBP0 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms