Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 RNA5SP507-201ENST00000363603 121 ntBASIC5.08□□□□□ -1.6
CCDC88CQ9P219 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC88CQ9P219 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC88CQ9P219 AL109941.1-201ENST00000401925 229 ntBASIC5.08□□□□□ -1.6
CCDC88CQ9P219 AC007394.1-201ENST00000421941 531 ntBASIC5.08□□□□□ -1.6
CCDC88CQ9P219 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC88CQ9P219 KATNBL1P2-201ENST00000433311 835 ntBASIC5.08□□□□□ -1.6
CCDC88CQ9P219 RPL19P16-201ENST00000433839 588 ntBASIC5.08□□□□□ -1.6
CCDC88CQ9P219 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC5.08□□□□□ -1.6
CCDC88CQ9P219 RPL7AP61-201ENST00000443410 636 ntBASIC5.08□□□□□ -1.6
CCDC88CQ9P219 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC88CQ9P219 RPL7P39-201ENST00000481157 744 ntBASIC5.08□□□□□ -1.6
CCDC88CQ9P219 AC072052.1-201ENST00000496556 306 ntBASIC5.08□□□□□ -1.6
CCDC88CQ9P219 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.08□□□□□ -1.6
CCDC88CQ9P219 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC88CQ9P219 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.08□□□□□ -1.6
CCDC88CQ9P219 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC88CQ9P219 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC88CQ9P219 MIR6837-201ENST00000620884 64 ntBASIC5.08□□□□□ -1.6
CCDC88CQ9P219 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC5.08□□□□□ -1.6
CCDC88CQ9P219 AP001784.1-201ENST00000624107 428 ntBASIC5.08□□□□□ -1.6
CCDC88CQ9P219 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CCDC88CQ9P219 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC88CQ9P219 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC88CQ9P219 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC88CQ9P219 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.08□□□□□ -1.6
CCDC88CQ9P219 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.08□□□□□ -1.6
CCDC88CQ9P219 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CCDC88CQ9P219 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC88CQ9P219 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
CCDC88CQ9P219 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
CCDC88CQ9P219 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.08□□□□□ -1.6
CCDC88CQ9P219 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CCDC88CQ9P219 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CCDC88CQ9P219 RPL7P56-201ENST00000429441 717 ntBASIC5.07□□□□□ -1.6
CCDC88CQ9P219 RPL7AP49-201ENST00000429522 581 ntBASIC5.07□□□□□ -1.6
CCDC88CQ9P219 AL591438.1-201ENST00000433508 581 ntBASIC5.07□□□□□ -1.6
CCDC88CQ9P219 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC88CQ9P219 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.07□□□□□ -1.6
CCDC88CQ9P219 PA2G4P6-201ENST00000438325 1197 ntBASIC5.07□□□□□ -1.6
CCDC88CQ9P219 AL163193.1-201ENST00000444895 788 ntBASIC5.07□□□□□ -1.6
CCDC88CQ9P219 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.07□□□□□ -1.6
CCDC88CQ9P219 ATP5LP5-201ENST00000483050 299 ntBASIC5.07□□□□□ -1.6
CCDC88CQ9P219 AC008410.1-201ENST00000483777 339 ntBASIC5.07□□□□□ -1.6
CCDC88CQ9P219 RN7SL30P-201ENST00000488416 306 ntBASIC5.07□□□□□ -1.6
CCDC88CQ9P219 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.07□□□□□ -1.6
CCDC88CQ9P219 AP006245.2-201ENST00000522004 300 ntBASIC5.07□□□□□ -1.6
CCDC88CQ9P219 RN7SL708P-201ENST00000580952 299 ntBASIC5.07□□□□□ -1.6
CCDC88CQ9P219 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
CCDC88CQ9P219 AC009163.6-201ENST00000612367 342 ntBASIC5.07□□□□□ -1.6
CCDC88CQ9P219 SAMMSON-209ENST00000641222 1100 ntBASIC5.07□□□□□ -1.6
CCDC88CQ9P219 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC88CQ9P219 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
CCDC88CQ9P219 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
CCDC88CQ9P219 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CCDC88CQ9P219 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC88CQ9P219 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.07□□□□□ -1.6
CCDC88CQ9P219 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC88CQ9P219 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.07□□□□□ -1.6
CCDC88CQ9P219 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC88CQ9P219 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC88CQ9P219 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC88CQ9P219 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.07□□□□□ -1.6
CCDC88CQ9P219 RNA5SP455-201ENST00000365190 119 ntBASIC5.07□□□□□ -1.6
CCDC88CQ9P219 RNU1-106P-201ENST00000384382 164 ntBASIC5.07□□□□□ -1.6
CCDC88CQ9P219 RBMY2KP-201ENST00000418221 992 ntBASIC5.07□□□□□ -1.6
CCDC88CQ9P219 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.07□□□□□ -1.6
CCDC88CQ9P219 EEF1B2P5-201ENST00000444820 548 ntBASIC5.07□□□□□ -1.6
CCDC88CQ9P219 RN7SL97P-201ENST00000486780 299 ntBASIC5.07□□□□□ -1.6
CCDC88CQ9P219 AC093763.2-201ENST00000505334 1223 ntBASIC5.07□□□□□ -1.6
CCDC88CQ9P219 HMGN1P9-201ENST00000515212 298 ntBASIC5.07□□□□□ -1.6
CCDC88CQ9P219 IGLV2-28-201ENST00000520681 304 ntBASIC5.07□□□□□ -1.6
CCDC88CQ9P219 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC5.07□□□□□ -1.6
CCDC88CQ9P219 OR4A17P-201ENST00000526032 904 ntBASIC5.07□□□□□ -1.6
CCDC88CQ9P219 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.07□□□□□ -1.6
CCDC88CQ9P219 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.07□□□□□ -1.6
CCDC88CQ9P219 AC005229.3-201ENST00000603438 323 ntBASIC5.07□□□□□ -1.6
CCDC88CQ9P219 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.07□□□□□ -1.6
CCDC88CQ9P219 AL162574.1-201ENST00000615702 950 ntBASIC5.07□□□□□ -1.6
CCDC88CQ9P219 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.07□□□□□ -1.6
CCDC88CQ9P219 AP003400.3-201ENST00000624904 346 ntBASIC5.07□□□□□ -1.6
CCDC88CQ9P219 CASC19-264ENST00000641912 1184 ntBASIC5.07□□□□□ -1.6
CCDC88CQ9P219 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC88CQ9P219 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.07□□□□□ -1.6
CCDC88CQ9P219 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
CCDC88CQ9P219 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC88CQ9P219 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.06□□□□□ -1.6
CCDC88CQ9P219 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.06□□□□□ -1.6
CCDC88CQ9P219 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
CCDC88CQ9P219 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.06□□□□□ -1.6
CCDC88CQ9P219 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CCDC88CQ9P219 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC88CQ9P219 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC88CQ9P219 AL645927.1-201ENST00000396783 406 ntBASIC5.06□□□□□ -1.6
CCDC88CQ9P219 AC211486.3-201ENST00000412694 621 ntBASIC5.06□□□□□ -1.6
CCDC88CQ9P219 EI24P4-201ENST00000423683 1078 ntBASIC5.06□□□□□ -1.6
CCDC88CQ9P219 SUMO2P1-206ENST00000445436 284 ntBASIC5.06□□□□□ -1.6
CCDC88CQ9P219 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.06□□□□□ -1.6
CCDC88CQ9P219 REG1CP-206ENST00000447469 496 ntBASIC5.06□□□□□ -1.6
CCDC88CQ9P219 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms