Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
SIX2Q9NPC8 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.65□□□□□ -1.5
SIX2Q9NPC8 EI24P4-201ENST00000423683 1078 ntBASIC5.65□□□□□ -1.5
SIX2Q9NPC8 CYCSP6-201ENST00000434498 302 ntBASIC5.65□□□□□ -1.5
SIX2Q9NPC8 AC097523.2-201ENST00000435551 652 ntBASIC5.65□□□□□ -1.5
SIX2Q9NPC8 RN7SL717P-201ENST00000478343 297 ntBASIC5.65□□□□□ -1.5
SIX2Q9NPC8 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.65□□□□□ -1.5
SIX2Q9NPC8 MYL12BP2-201ENST00000503948 512 ntBASIC5.65□□□□□ -1.5
SIX2Q9NPC8 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.65□□□□□ -1.5
SIX2Q9NPC8 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.65□□□□□ -1.5
SIX2Q9NPC8 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.65□□□□□ -1.5
SIX2Q9NPC8 AL359219.2-201ENST00000555184 348 ntBASIC5.65□□□□□ -1.5
SIX2Q9NPC8 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.65□□□□□ -1.5
SIX2Q9NPC8 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC5.65□□□□□ -1.5
SIX2Q9NPC8 AC106730.2-201ENST00000566641 540 ntBASIC5.65□□□□□ -1.5
SIX2Q9NPC8 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SIX2Q9NPC8 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.65□□□□□ -1.5
SIX2Q9NPC8 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC5.65□□□□□ -1.5
SIX2Q9NPC8 AC015849.6-201ENST00000605454 474 ntBASIC5.65□□□□□ -1.5
SIX2Q9NPC8 AC243960.7-201ENST00000623532 707 ntBASIC5.65□□□□□ -1.5
SIX2Q9NPC8 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SIX2Q9NPC8 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SIX2Q9NPC8 AC027279.1-201ENST00000568885 4284 ntBASIC5.65□□□□□ -1.51
SIX2Q9NPC8 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
SIX2Q9NPC8 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.65□□□□□ -1.51
SIX2Q9NPC8 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SIX2Q9NPC8 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SIX2Q9NPC8 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SIX2Q9NPC8 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.64□□□□□ -1.51
SIX2Q9NPC8 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SIX2Q9NPC8 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
SIX2Q9NPC8 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SIX2Q9NPC8 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
SIX2Q9NPC8 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
SIX2Q9NPC8 RNA5SP242-201ENST00000364171 118 ntBASIC5.64□□□□□ -1.51
SIX2Q9NPC8 RNU1-74P-201ENST00000384108 171 ntBASIC5.64□□□□□ -1.51
SIX2Q9NPC8 MIR105-1-201ENST00000385222 81 ntBASIC5.64□□□□□ -1.51
SIX2Q9NPC8 HSPA8P15-201ENST00000401676 786 ntBASIC5.64□□□□□ -1.51
SIX2Q9NPC8 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.64□□□□□ -1.51
SIX2Q9NPC8 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC5.64□□□□□ -1.51
SIX2Q9NPC8 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SIX2Q9NPC8 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC5.64□□□□□ -1.51
SIX2Q9NPC8 BX842559.2-201ENST00000451418 605 ntBASIC5.64□□□□□ -1.51
SIX2Q9NPC8 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.64□□□□□ -1.51
SIX2Q9NPC8 RPSAP39-201ENST00000467439 883 ntBASIC5.64□□□□□ -1.51
SIX2Q9NPC8 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.64□□□□□ -1.51
SIX2Q9NPC8 ACTR6P1-201ENST00000514311 1104 ntBASIC5.64□□□□□ -1.51
SIX2Q9NPC8 RNA5SP362-201ENST00000516048 118 ntBASIC5.64□□□□□ -1.51
SIX2Q9NPC8 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC5.64□□□□□ -1.51
SIX2Q9NPC8 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SIX2Q9NPC8 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.64□□□□□ -1.51
SIX2Q9NPC8 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.64□□□□□ -1.51
SIX2Q9NPC8 FAM72A-208ENST00000607379 1139 ntBASIC5.64□□□□□ -1.51
SIX2Q9NPC8 AP005432.2-201ENST00000608162 586 ntBASIC5.64□□□□□ -1.51
SIX2Q9NPC8 AP005131.7-201ENST00000610087 611 ntBASIC5.64□□□□□ -1.51
SIX2Q9NPC8 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SIX2Q9NPC8 AC004477.3-201ENST00000614061 590 ntBASIC5.64□□□□□ -1.51
SIX2Q9NPC8 AC108359.1-201ENST00000616451 1211 ntBASIC5.64□□□□□ -1.51
SIX2Q9NPC8 AC005840.5-201ENST00000619166 599 ntBASIC5.64□□□□□ -1.51
SIX2Q9NPC8 AC136428.4-201ENST00000634254 1155 ntBASIC5.64□□□□□ -1.51
SIX2Q9NPC8 CYP4F35P-202ENST00000636121 390 ntBASIC5.64□□□□□ -1.51
SIX2Q9NPC8 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
SIX2Q9NPC8 AC022417.1-201ENST00000624768 1303 ntBASIC5.64□□□□□ -1.51
SIX2Q9NPC8 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
SIX2Q9NPC8 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.64□□□□□ -1.51
SIX2Q9NPC8 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.64□□□□□ -1.51
SIX2Q9NPC8 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
SIX2Q9NPC8 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SIX2Q9NPC8 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SIX2Q9NPC8 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.64□□□□□ -1.51
SIX2Q9NPC8 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SIX2Q9NPC8 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SIX2Q9NPC8 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SIX2Q9NPC8 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
SIX2Q9NPC8 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.63□□□□□ -1.51
SIX2Q9NPC8 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
SIX2Q9NPC8 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.63□□□□□ -1.51
SIX2Q9NPC8 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SIX2Q9NPC8 AC004817.4-201ENST00000602396 3625 ntBASIC5.63□□□□□ -1.51
SIX2Q9NPC8 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SIX2Q9NPC8 AC092747.4-201ENST00000620519 1861 ntBASIC5.63□□□□□ -1.51
SIX2Q9NPC8 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
SIX2Q9NPC8 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SIX2Q9NPC8 U3.2-201ENST00000362981 210 ntBASIC5.63□□□□□ -1.51
SIX2Q9NPC8 RNA5SP132-201ENST00000364725 118 ntBASIC5.63□□□□□ -1.51
SIX2Q9NPC8 RNA5SP90-201ENST00000364801 99 ntBASIC5.63□□□□□ -1.51
SIX2Q9NPC8 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.63□□□□□ -1.51
SIX2Q9NPC8 RNU1-149P-201ENST00000390870 161 ntBASIC5.63□□□□□ -1.51
SIX2Q9NPC8 RPL21P67-201ENST00000402896 478 ntBASIC5.63□□□□□ -1.51
SIX2Q9NPC8 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.63□□□□□ -1.51
SIX2Q9NPC8 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.63□□□□□ -1.51
SIX2Q9NPC8 AL133325.1-201ENST00000421090 382 ntBASIC5.63□□□□□ -1.51
SIX2Q9NPC8 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.63□□□□□ -1.51
SIX2Q9NPC8 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.63□□□□□ -1.51
SIX2Q9NPC8 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC5.63□□□□□ -1.51
SIX2Q9NPC8 FCF1P7-201ENST00000451185 558 ntBASIC5.63□□□□□ -1.51
SIX2Q9NPC8 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.63□□□□□ -1.51
SIX2Q9NPC8 AC245028.2-201ENST00000458673 253 ntBASIC5.63□□□□□ -1.51
SIX2Q9NPC8 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.63□□□□□ -1.51
SIX2Q9NPC8 RN7SL189P-201ENST00000468631 289 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms