Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 NDUFA5P2-201ENST00000519723 344 ntBASIC5.86□□□□□ -1.47
SEC61A2Q9H9S3 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.86□□□□□ -1.47
SEC61A2Q9H9S3 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC5.86□□□□□ -1.47
SEC61A2Q9H9S3 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5.86□□□□□ -1.47
SEC61A2Q9H9S3 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC5.86□□□□□ -1.47
SEC61A2Q9H9S3 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC5.86□□□□□ -1.47
SEC61A2Q9H9S3 DUXAP1-201ENST00000556632 463 ntBASIC5.86□□□□□ -1.47
SEC61A2Q9H9S3 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC5.86□□□□□ -1.47
SEC61A2Q9H9S3 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC5.86□□□□□ -1.47
SEC61A2Q9H9S3 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC5.86□□□□□ -1.47
SEC61A2Q9H9S3 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC5.86□□□□□ -1.47
SEC61A2Q9H9S3 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.86□□□□□ -1.47
SEC61A2Q9H9S3 AL512347.1-201ENST00000566420 503 ntBASIC5.86□□□□□ -1.47
SEC61A2Q9H9S3 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC5.86□□□□□ -1.47
SEC61A2Q9H9S3 ARGFXP2-201ENST00000579304 949 ntBASIC5.86□□□□□ -1.47
SEC61A2Q9H9S3 RPL29P33-201ENST00000587474 316 ntBASIC5.86□□□□□ -1.47
SEC61A2Q9H9S3 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SEC61A2Q9H9S3 AC022146.1-201ENST00000595307 847 ntBASIC5.86□□□□□ -1.47
SEC61A2Q9H9S3 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC5.86□□□□□ -1.47
SEC61A2Q9H9S3 AL356986.1-201ENST00000604085 341 ntBASIC5.86□□□□□ -1.47
SEC61A2Q9H9S3 NQO2-209ENST00000606474 470 ntTSL 3 BASIC5.86□□□□□ -1.47
SEC61A2Q9H9S3 AC080013.4-201ENST00000607624 649 ntBASIC5.86□□□□□ -1.47
SEC61A2Q9H9S3 VN1R74P-201ENST00000613259 503 ntBASIC5.86□□□□□ -1.47
SEC61A2Q9H9S3 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC5.86□□□□□ -1.47
SEC61A2Q9H9S3 AC105227.2-201ENST00000615075 605 ntBASIC5.86□□□□□ -1.47
SEC61A2Q9H9S3 OR1S1-201ENST00000624470 978 ntBASIC5.86□□□□□ -1.47
SEC61A2Q9H9S3 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC5.86□□□□□ -1.47
SEC61A2Q9H9S3 AC244258.1-201ENST00000637553 1071 ntBASIC5.86□□□□□ -1.47
SEC61A2Q9H9S3 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
SEC61A2Q9H9S3 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SEC61A2Q9H9S3 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
SEC61A2Q9H9S3 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
SEC61A2Q9H9S3 DOCK11P1-201ENST00000553480 5932 ntBASIC5.86□□□□□ -1.47
SEC61A2Q9H9S3 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
SEC61A2Q9H9S3 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SEC61A2Q9H9S3 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC5.86□□□□□ -1.47
SEC61A2Q9H9S3 AP001157.1-201ENST00000550837 2339 ntBASIC5.86□□□□□ -1.47
SEC61A2Q9H9S3 AP004289.1-201ENST00000436307 2205 ntBASIC5.86□□□□□ -1.47
SEC61A2Q9H9S3 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SEC61A2Q9H9S3 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC5.86□□□□□ -1.47
SEC61A2Q9H9S3 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SEC61A2Q9H9S3 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 OLMALINC-203ENST00000641087 3779 ntBASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 UGT2B24P-201ENST00000514441 1597 ntBASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 MAPK10-261ENST00000641050 3109 ntBASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 FAM32BP-201ENST00000344033 333 ntBASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 VTRNA3-1P-201ENST00000362552 102 ntBASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 RNU1-5P-201ENST00000362684 144 ntBASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 Y_RNA.516-201ENST00000384541 124 ntBASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 OR4K6P-201ENST00000416478 897 ntBASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 MTCO2P34-201ENST00000421994 607 ntBASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 AC234771.4-201ENST00000441416 730 ntBASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 AL357520.1-201ENST00000441557 453 ntBASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 OR51B8P-201ENST00000449892 769 ntBASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 TVP23CP1-201ENST00000450317 639 ntBASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 NPM1P9-201ENST00000453156 844 ntBASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 AC027673.1-201ENST00000456245 405 ntBASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 AC090589.1-201ENST00000473109 362 ntBASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 AC099340.1-201ENST00000475247 599 ntBASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 AC008885.2-201ENST00000509506 930 ntBASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 OR52K3P-201ENST00000531655 943 ntBASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 NBEAP1-201ENST00000554452 979 ntBASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 RPS11-205ENST00000599561 430 ntTSL 5 BASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 AC006539.2-201ENST00000601729 572 ntBASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 AC036176.3-201ENST00000602456 418 ntBASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 156.7 ms