Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 AL035422.1-201ENST00000414193 397 ntBASIC5.42□□□□□ -1.54
VIPAS39Q9H9C1 AK4P4-201ENST00000419465 646 ntBASIC5.42□□□□□ -1.54
VIPAS39Q9H9C1 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.42□□□□□ -1.54
VIPAS39Q9H9C1 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC5.42□□□□□ -1.54
VIPAS39Q9H9C1 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC5.42□□□□□ -1.54
VIPAS39Q9H9C1 AC126120.1-201ENST00000431082 470 ntBASIC5.42□□□□□ -1.54
VIPAS39Q9H9C1 VN1R110P-201ENST00000438988 971 ntBASIC5.42□□□□□ -1.54
VIPAS39Q9H9C1 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
VIPAS39Q9H9C1 CFL1P4-201ENST00000451536 498 ntBASIC5.42□□□□□ -1.54
VIPAS39Q9H9C1 RN7SL393P-201ENST00000463588 296 ntBASIC5.42□□□□□ -1.54
VIPAS39Q9H9C1 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
VIPAS39Q9H9C1 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC5.42□□□□□ -1.54
VIPAS39Q9H9C1 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC5.42□□□□□ -1.54
VIPAS39Q9H9C1 HMGN1P16-201ENST00000508308 283 ntBASIC5.42□□□□□ -1.54
VIPAS39Q9H9C1 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.42□□□□□ -1.54
VIPAS39Q9H9C1 HMGN1P17-201ENST00000513734 295 ntBASIC5.42□□□□□ -1.54
VIPAS39Q9H9C1 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
VIPAS39Q9H9C1 RNA5SP249-201ENST00000516127 99 ntBASIC5.42□□□□□ -1.54
VIPAS39Q9H9C1 SCARNA18.1-201ENST00000516330 83 ntBASIC5.42□□□□□ -1.54
VIPAS39Q9H9C1 HMGB1P19-201ENST00000517578 577 ntBASIC5.42□□□□□ -1.54
VIPAS39Q9H9C1 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
VIPAS39Q9H9C1 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.42□□□□□ -1.54
VIPAS39Q9H9C1 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC5.42□□□□□ -1.54
VIPAS39Q9H9C1 RPA2P1-201ENST00000556557 721 ntBASIC5.42□□□□□ -1.54
VIPAS39Q9H9C1 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC5.42□□□□□ -1.54
VIPAS39Q9H9C1 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.42□□□□□ -1.54
VIPAS39Q9H9C1 MTATP6P25-201ENST00000574491 261 ntBASIC5.42□□□□□ -1.54
VIPAS39Q9H9C1 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.42□□□□□ -1.54
VIPAS39Q9H9C1 AC011891.2-201ENST00000604949 397 ntBASIC5.42□□□□□ -1.54
VIPAS39Q9H9C1 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC5.42□□□□□ -1.54
VIPAS39Q9H9C1 AC096586.2-201ENST00000610260 441 ntBASIC5.42□□□□□ -1.54
VIPAS39Q9H9C1 AL356752.1-201ENST00000615844 593 ntBASIC5.42□□□□□ -1.54
VIPAS39Q9H9C1 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.42□□□□□ -1.54
VIPAS39Q9H9C1 TEX41-279ENST00000629149 609 ntTSL 5 BASIC5.42□□□□□ -1.54
VIPAS39Q9H9C1 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.42□□□□□ -1.54
VIPAS39Q9H9C1 AC010325.3-201ENST00000641084 394 ntBASIC5.42□□□□□ -1.54
VIPAS39Q9H9C1 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
VIPAS39Q9H9C1 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.42□□□□□ -1.54
VIPAS39Q9H9C1 DHX9P1-201ENST00000436565 3076 ntBASIC5.42□□□□□ -1.54
VIPAS39Q9H9C1 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
VIPAS39Q9H9C1 AL929601.4-201ENST00000613011 1341 ntBASIC5.42□□□□□ -1.54
VIPAS39Q9H9C1 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
VIPAS39Q9H9C1 AC133552.1-201ENST00000569988 4007 ntBASIC5.42□□□□□ -1.54
VIPAS39Q9H9C1 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC5.42□□□□□ -1.54
VIPAS39Q9H9C1 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
VIPAS39Q9H9C1 AL034370.1-201ENST00000397254 1590 ntBASIC5.42□□□□□ -1.54
VIPAS39Q9H9C1 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
VIPAS39Q9H9C1 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
VIPAS39Q9H9C1 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.42□□□□□ -1.54
VIPAS39Q9H9C1 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.42□□□□□ -1.54
VIPAS39Q9H9C1 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.41□□□□□ -1.54
VIPAS39Q9H9C1 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
VIPAS39Q9H9C1 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
VIPAS39Q9H9C1 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
VIPAS39Q9H9C1 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.41□□□□□ -1.54
VIPAS39Q9H9C1 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.41□□□□□ -1.54
VIPAS39Q9H9C1 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
VIPAS39Q9H9C1 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
VIPAS39Q9H9C1 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
VIPAS39Q9H9C1 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.41□□□□□ -1.54
VIPAS39Q9H9C1 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
VIPAS39Q9H9C1 MIR551A-201ENST00000385042 96 ntBASIC5.41□□□□□ -1.54
VIPAS39Q9H9C1 AP000580.1-201ENST00000404439 358 ntBASIC5.41□□□□□ -1.54
VIPAS39Q9H9C1 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
VIPAS39Q9H9C1 AC099782.1-201ENST00000425889 474 ntBASIC5.41□□□□□ -1.54
VIPAS39Q9H9C1 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.41□□□□□ -1.54
VIPAS39Q9H9C1 AL022331.1-201ENST00000429025 477 ntBASIC5.41□□□□□ -1.54
VIPAS39Q9H9C1 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.41□□□□□ -1.54
VIPAS39Q9H9C1 AL031681.1-201ENST00000443304 400 ntBASIC5.41□□□□□ -1.54
VIPAS39Q9H9C1 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.41□□□□□ -1.54
VIPAS39Q9H9C1 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
VIPAS39Q9H9C1 AC063955.1-201ENST00000462872 685 ntBASIC5.41□□□□□ -1.54
VIPAS39Q9H9C1 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.41□□□□□ -1.54
VIPAS39Q9H9C1 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.41□□□□□ -1.54
VIPAS39Q9H9C1 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.41□□□□□ -1.54
VIPAS39Q9H9C1 EIF4A2P5-201ENST00000529914 499 ntBASIC5.41□□□□□ -1.54
VIPAS39Q9H9C1 AC025423.2-201ENST00000537570 439 ntBASIC5.41□□□□□ -1.54
VIPAS39Q9H9C1 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.41□□□□□ -1.54
VIPAS39Q9H9C1 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.41□□□□□ -1.54
VIPAS39Q9H9C1 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC5.41□□□□□ -1.54
VIPAS39Q9H9C1 AL713998.2-201ENST00000604538 1198 ntBASIC5.41□□□□□ -1.54
VIPAS39Q9H9C1 AC009597.2-201ENST00000604659 592 ntBASIC5.41□□□□□ -1.54
VIPAS39Q9H9C1 OR7M1P-201ENST00000608946 533 ntBASIC5.41□□□□□ -1.54
VIPAS39Q9H9C1 MIR6793-201ENST00000612376 63 ntBASIC5.41□□□□□ -1.54
VIPAS39Q9H9C1 MTCO1P1-201ENST00000624263 1081 ntBASIC5.41□□□□□ -1.54
VIPAS39Q9H9C1 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
VIPAS39Q9H9C1 MTCO1P7-201ENST00000419523 1542 ntBASIC5.41□□□□□ -1.54
VIPAS39Q9H9C1 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
VIPAS39Q9H9C1 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
VIPAS39Q9H9C1 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
VIPAS39Q9H9C1 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.41□□□□□ -1.54
VIPAS39Q9H9C1 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.41□□□□□ -1.54
VIPAS39Q9H9C1 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
VIPAS39Q9H9C1 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
VIPAS39Q9H9C1 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.41□□□□□ -1.54
VIPAS39Q9H9C1 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
VIPAS39Q9H9C1 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
VIPAS39Q9H9C1 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.41□□□□□ -1.54
VIPAS39Q9H9C1 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
VIPAS39Q9H9C1 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms