Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.75□□□□□ -1.49
NXF3Q9H4D5 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.74□□□□□ -1.49
NXF3Q9H4D5 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NXF3Q9H4D5 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.74□□□□□ -1.49
NXF3Q9H4D5 AC083837.1-201ENST00000565297 2994 ntBASIC5.74□□□□□ -1.49
NXF3Q9H4D5 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NXF3Q9H4D5 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.74□□□□□ -1.49
NXF3Q9H4D5 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NXF3Q9H4D5 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NXF3Q9H4D5 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NXF3Q9H4D5 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NXF3Q9H4D5 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NXF3Q9H4D5 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NXF3Q9H4D5 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NXF3Q9H4D5 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NXF3Q9H4D5 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
NXF3Q9H4D5 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.74□□□□□ -1.49
NXF3Q9H4D5 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.74□□□□□ -1.49
NXF3Q9H4D5 EI24P4-201ENST00000423683 1078 ntBASIC5.74□□□□□ -1.49
NXF3Q9H4D5 RPL12P3-201ENST00000440080 396 ntBASIC5.74□□□□□ -1.49
NXF3Q9H4D5 AC073850.1-201ENST00000449243 255 ntBASIC5.74□□□□□ -1.49
NXF3Q9H4D5 RPL7P40-201ENST00000481703 745 ntBASIC5.74□□□□□ -1.49
NXF3Q9H4D5 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.74□□□□□ -1.49
NXF3Q9H4D5 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.74□□□□□ -1.49
NXF3Q9H4D5 AC110775.1-201ENST00000513721 462 ntBASIC5.74□□□□□ -1.49
NXF3Q9H4D5 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.74□□□□□ -1.49
NXF3Q9H4D5 AC079064.1-201ENST00000528365 362 ntBASIC5.74□□□□□ -1.49
NXF3Q9H4D5 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.74□□□□□ -1.49
NXF3Q9H4D5 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.74□□□□□ -1.49
NXF3Q9H4D5 BNIP3P32-201ENST00000600015 554 ntBASIC5.74□□□□□ -1.49
NXF3Q9H4D5 AC108738.1-201ENST00000603703 237 ntBASIC5.74□□□□□ -1.49
NXF3Q9H4D5 AC024940.4-201ENST00000605507 246 ntBASIC5.74□□□□□ -1.49
NXF3Q9H4D5 AC004948.1-201ENST00000609858 672 ntBASIC5.74□□□□□ -1.49
NXF3Q9H4D5 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.74□□□□□ -1.49
NXF3Q9H4D5 AC009163.6-201ENST00000612367 342 ntBASIC5.74□□□□□ -1.49
NXF3Q9H4D5 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.74□□□□□ -1.49
NXF3Q9H4D5 AL353684.1-201ENST00000622677 1120 ntBASIC5.74□□□□□ -1.49
NXF3Q9H4D5 AP003400.3-201ENST00000624904 346 ntBASIC5.74□□□□□ -1.49
NXF3Q9H4D5 AC099654.6-201ENST00000636487 512 ntBASIC5.74□□□□□ -1.49
NXF3Q9H4D5 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NXF3Q9H4D5 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NXF3Q9H4D5 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.74□□□□□ -1.49
NXF3Q9H4D5 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NXF3Q9H4D5 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.74□□□□□ -1.49
NXF3Q9H4D5 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NXF3Q9H4D5 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
NXF3Q9H4D5 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NXF3Q9H4D5 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NXF3Q9H4D5 XKRY2-202ENST00000623874 1581 ntBASIC5.73□□□□□ -1.49
NXF3Q9H4D5 XKRY-202ENST00000624960 1581 ntBASIC5.73□□□□□ -1.49
NXF3Q9H4D5 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
NXF3Q9H4D5 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.73□□□□□ -1.49
NXF3Q9H4D5 AC092681.1-201ENST00000297369 291 ntBASIC5.73□□□□□ -1.49
NXF3Q9H4D5 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
NXF3Q9H4D5 RN7SKP185-201ENST00000362813 326 ntBASIC5.73□□□□□ -1.49
NXF3Q9H4D5 U3.3-201ENST00000362986 216 ntBASIC5.73□□□□□ -1.49
NXF3Q9H4D5 AC211486.3-201ENST00000412694 621 ntBASIC5.73□□□□□ -1.49
NXF3Q9H4D5 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.73□□□□□ -1.49
NXF3Q9H4D5 AC109462.1-201ENST00000491087 368 ntBASIC5.73□□□□□ -1.49
NXF3Q9H4D5 GLUD1P3-202ENST00000508551 200 ntBASIC5.73□□□□□ -1.49
NXF3Q9H4D5 GTF2F2P1-201ENST00000511083 675 ntBASIC5.73□□□□□ -1.49
NXF3Q9H4D5 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.73□□□□□ -1.49
NXF3Q9H4D5 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.73□□□□□ -1.49
NXF3Q9H4D5 EIF3KP3-201ENST00000514461 639 ntBASIC5.73□□□□□ -1.49
NXF3Q9H4D5 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.73□□□□□ -1.49
NXF3Q9H4D5 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.73□□□□□ -1.49
NXF3Q9H4D5 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.73□□□□□ -1.49
NXF3Q9H4D5 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
NXF3Q9H4D5 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
NXF3Q9H4D5 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
NXF3Q9H4D5 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
NXF3Q9H4D5 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.73□□□□□ -1.49
NXF3Q9H4D5 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NXF3Q9H4D5 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.73□□□□□ -1.49
NXF3Q9H4D5 AL031658.2-201ENST00000616850 651 ntBASIC5.73□□□□□ -1.49
NXF3Q9H4D5 MTCO1P1-201ENST00000624263 1081 ntBASIC5.73□□□□□ -1.49
NXF3Q9H4D5 AP000550.3-201ENST00000637734 379 ntBASIC5.73□□□□□ -1.49
NXF3Q9H4D5 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.73□□□□□ -1.49
NXF3Q9H4D5 AC092070.2-203ENST00000598377 3644 ntBASIC5.73□□□□□ -1.49
NXF3Q9H4D5 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.72□□□□□ -1.49
NXF3Q9H4D5 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NXF3Q9H4D5 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.72□□□□□ -1.49
NXF3Q9H4D5 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NXF3Q9H4D5 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NXF3Q9H4D5 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NXF3Q9H4D5 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NXF3Q9H4D5 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
NXF3Q9H4D5 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.72□□□□□ -1.49
NXF3Q9H4D5 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
NXF3Q9H4D5 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.72□□□□□ -1.49
NXF3Q9H4D5 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.72□□□□□ -1.49
NXF3Q9H4D5 CLUHP1-201ENST00000435012 1190 ntBASIC5.72□□□□□ -1.49
NXF3Q9H4D5 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.72□□□□□ -1.49
NXF3Q9H4D5 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.72□□□□□ -1.49
NXF3Q9H4D5 AC092647.2-201ENST00000452998 253 ntBASIC5.72□□□□□ -1.49
NXF3Q9H4D5 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.72□□□□□ -1.49
NXF3Q9H4D5 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.72□□□□□ -1.49
NXF3Q9H4D5 OR8Q1P-201ENST00000526467 655 ntBASIC5.72□□□□□ -1.49
NXF3Q9H4D5 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.72□□□□□ -1.49
NXF3Q9H4D5 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms