Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.6□□□□□ -1.51
TRIM4Q9C037 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.6□□□□□ -1.51
TRIM4Q9C037 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.6□□□□□ -1.51
TRIM4Q9C037 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.6□□□□□ -1.51
TRIM4Q9C037 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM4Q9C037 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.6□□□□□ -1.51
TRIM4Q9C037 AC106730.2-201ENST00000566641 540 ntBASIC5.6□□□□□ -1.51
TRIM4Q9C037 AP001496.3-201ENST00000580230 913 ntBASIC5.6□□□□□ -1.51
TRIM4Q9C037 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC5.6□□□□□ -1.51
TRIM4Q9C037 AC015802.2-201ENST00000589690 189 ntBASIC5.6□□□□□ -1.51
TRIM4Q9C037 MIR6809-201ENST00000612189 116 ntBASIC5.6□□□□□ -1.51
TRIM4Q9C037 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.6□□□□□ -1.51
TRIM4Q9C037 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.6□□□□□ -1.51
TRIM4Q9C037 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM4Q9C037 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM4Q9C037 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM4Q9C037 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM4Q9C037 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM4Q9C037 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM4Q9C037 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM4Q9C037 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.59□□□□□ -1.51
TRIM4Q9C037 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.59□□□□□ -1.51
TRIM4Q9C037 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.59□□□□□ -1.51
TRIM4Q9C037 BTBD10P1-201ENST00000549824 1352 ntBASIC5.59□□□□□ -1.51
TRIM4Q9C037 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM4Q9C037 RN7SKP77-201ENST00000363261 353 ntBASIC5.59□□□□□ -1.51
TRIM4Q9C037 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.59□□□□□ -1.51
TRIM4Q9C037 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM4Q9C037 AL645927.1-201ENST00000396783 406 ntBASIC5.59□□□□□ -1.51
TRIM4Q9C037 AC211486.3-201ENST00000412694 621 ntBASIC5.59□□□□□ -1.51
TRIM4Q9C037 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM4Q9C037 RPS7P3-201ENST00000443360 580 ntBASIC5.59□□□□□ -1.51
TRIM4Q9C037 EEF1B2P6-201ENST00000445713 673 ntBASIC5.59□□□□□ -1.51
TRIM4Q9C037 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC5.59□□□□□ -1.51
TRIM4Q9C037 AC104164.1-201ENST00000460282 590 ntBASIC5.59□□□□□ -1.51
TRIM4Q9C037 AP000942.1-201ENST00000463969 747 ntBASIC5.59□□□□□ -1.51
TRIM4Q9C037 RN7SL269P-201ENST00000467795 305 ntBASIC5.59□□□□□ -1.51
TRIM4Q9C037 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM4Q9C037 RN7SL184P-201ENST00000488308 297 ntBASIC5.59□□□□□ -1.51
TRIM4Q9C037 AC074087.1-201ENST00000512059 724 ntBASIC5.59□□□□□ -1.51
TRIM4Q9C037 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.59□□□□□ -1.51
TRIM4Q9C037 RFPL4AP5-201ENST00000514977 504 ntBASIC5.59□□□□□ -1.51
TRIM4Q9C037 AC078899.1-201ENST00000521432 1185 ntBASIC5.59□□□□□ -1.51
TRIM4Q9C037 AC110056.1-201ENST00000525759 911 ntBASIC5.59□□□□□ -1.51
TRIM4Q9C037 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.59□□□□□ -1.51
TRIM4Q9C037 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.59□□□□□ -1.51
TRIM4Q9C037 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.59□□□□□ -1.51
TRIM4Q9C037 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.59□□□□□ -1.51
TRIM4Q9C037 MIR4776-2-201ENST00000580204 80 ntBASIC5.59□□□□□ -1.51
TRIM4Q9C037 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.59□□□□□ -1.51
TRIM4Q9C037 FAM27E4-201ENST00000605259 342 ntBASIC5.59□□□□□ -1.51
TRIM4Q9C037 AL445222.1-201ENST00000607259 628 ntBASIC5.59□□□□□ -1.51
TRIM4Q9C037 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.59□□□□□ -1.51
TRIM4Q9C037 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.59□□□□□ -1.51
TRIM4Q9C037 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.59□□□□□ -1.51
TRIM4Q9C037 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
TRIM4Q9C037 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.59□□□□□ -1.51
TRIM4Q9C037 AC083843.3-201ENST00000623679 2186 ntBASIC5.59□□□□□ -1.52
TRIM4Q9C037 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
TRIM4Q9C037 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM4Q9C037 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM4Q9C037 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
TRIM4Q9C037 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM4Q9C037 MTCO1P46-201ENST00000451639 1491 ntBASIC5.58□□□□□ -1.52
TRIM4Q9C037 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
TRIM4Q9C037 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
TRIM4Q9C037 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
TRIM4Q9C037 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.58□□□□□ -1.52
TRIM4Q9C037 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM4Q9C037 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM4Q9C037 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM4Q9C037 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM4Q9C037 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.58□□□□□ -1.52
TRIM4Q9C037 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM4Q9C037 RPL35AP24-201ENST00000413846 330 ntBASIC5.58□□□□□ -1.52
TRIM4Q9C037 HMGB1P32-201ENST00000425971 565 ntBASIC5.58□□□□□ -1.52
TRIM4Q9C037 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.58□□□□□ -1.52
TRIM4Q9C037 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC5.58□□□□□ -1.52
TRIM4Q9C037 NPM1P33-201ENST00000438918 872 ntBASIC5.58□□□□□ -1.52
TRIM4Q9C037 VN1R110P-201ENST00000438988 971 ntBASIC5.58□□□□□ -1.52
TRIM4Q9C037 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.58□□□□□ -1.52
TRIM4Q9C037 AL606490.8-201ENST00000441624 319 ntBASIC5.58□□□□□ -1.52
TRIM4Q9C037 SPRYD7P1-201ENST00000443861 570 ntBASIC5.58□□□□□ -1.52
TRIM4Q9C037 RPS23P9-201ENST00000448848 438 ntBASIC5.58□□□□□ -1.52
TRIM4Q9C037 FRG2FP-204ENST00000453982 852 ntBASIC5.58□□□□□ -1.52
TRIM4Q9C037 AC007386.1-201ENST00000455212 582 ntBASIC5.58□□□□□ -1.52
TRIM4Q9C037 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.58□□□□□ -1.52
TRIM4Q9C037 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.58□□□□□ -1.52
TRIM4Q9C037 AL603882.1-201ENST00000463059 681 ntBASIC5.58□□□□□ -1.52
TRIM4Q9C037 AC090142.2-201ENST00000483263 416 ntBASIC5.58□□□□□ -1.52
TRIM4Q9C037 AC093267.1-201ENST00000489176 961 ntBASIC5.58□□□□□ -1.52
TRIM4Q9C037 AC093763.2-201ENST00000505334 1223 ntBASIC5.58□□□□□ -1.52
TRIM4Q9C037 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.58□□□□□ -1.52
TRIM4Q9C037 OR56A7P-201ENST00000524865 941 ntBASIC5.58□□□□□ -1.52
TRIM4Q9C037 OR4A46P-201ENST00000527255 933 ntBASIC5.58□□□□□ -1.52
TRIM4Q9C037 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
TRIM4Q9C037 AC090424.1-201ENST00000535243 736 ntBASIC5.58□□□□□ -1.52
TRIM4Q9C037 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.58□□□□□ -1.52
TRIM4Q9C037 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.58□□□□□ -1.52
TRIM4Q9C037 AC005244.1-201ENST00000582566 339 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms