Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
SCAPERQ9BY12 EEF1A1P36-201ENST00000427807 1351 ntBASIC7.96□□□□□ -1.14
SCAPERQ9BY12 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
SCAPERQ9BY12 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
SCAPERQ9BY12 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC7.95□□□□□ -1.14
SCAPERQ9BY12 HSPA8P15-201ENST00000401676 786 ntBASIC7.95□□□□□ -1.14
SCAPERQ9BY12 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC7.95□□□□□ -1.14
SCAPERQ9BY12 RPL34P27-201ENST00000428810 349 ntBASIC7.95□□□□□ -1.14
SCAPERQ9BY12 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC7.95□□□□□ -1.14
SCAPERQ9BY12 RN7SKP260-201ENST00000516907 149 ntBASIC7.95□□□□□ -1.14
SCAPERQ9BY12 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC7.95□□□□□ -1.14
SCAPERQ9BY12 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC7.95□□□□□ -1.14
SCAPERQ9BY12 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
SCAPERQ9BY12 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
SCAPERQ9BY12 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
SCAPERQ9BY12 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC7.95□□□□□ -1.14
SCAPERQ9BY12 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
SCAPERQ9BY12 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
SCAPERQ9BY12 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC7.95□□□□□ -1.14
SCAPERQ9BY12 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
SCAPERQ9BY12 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC7.95□□□□□ -1.14
SCAPERQ9BY12 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
SCAPERQ9BY12 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
SCAPERQ9BY12 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC7.95□□□□□ -1.14
SCAPERQ9BY12 RPL10P10-201ENST00000403509 664 ntBASIC7.95□□□□□ -1.14
SCAPERQ9BY12 AP002530.1-201ENST00000405705 684 ntBASIC7.95□□□□□ -1.14
SCAPERQ9BY12 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
SCAPERQ9BY12 RPL18P10-201ENST00000425606 538 ntBASIC7.95□□□□□ -1.14
SCAPERQ9BY12 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC7.95□□□□□ -1.14
SCAPERQ9BY12 AC112498.1-201ENST00000444401 332 ntBASIC7.95□□□□□ -1.14
SCAPERQ9BY12 AL356981.1-201ENST00000454879 684 ntBASIC7.95□□□□□ -1.14
SCAPERQ9BY12 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC7.95□□□□□ -1.14
SCAPERQ9BY12 IGBP1P5-201ENST00000507524 1000 ntBASIC7.95□□□□□ -1.14
SCAPERQ9BY12 RN7SKP67-201ENST00000515905 235 ntBASIC7.95□□□□□ -1.14
SCAPERQ9BY12 AP003080.1-202ENST00000526526 915 ntBASIC7.95□□□□□ -1.14
SCAPERQ9BY12 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC7.95□□□□□ -1.14
SCAPERQ9BY12 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
SCAPERQ9BY12 AC136624.4-201ENST00000573044 370 ntBASIC7.95□□□□□ -1.14
SCAPERQ9BY12 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC7.95□□□□□ -1.14
SCAPERQ9BY12 AC091042.1-201ENST00000579213 173 ntBASIC7.95□□□□□ -1.14
SCAPERQ9BY12 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
SCAPERQ9BY12 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
SCAPERQ9BY12 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC7.94□□□□□ -1.14
SCAPERQ9BY12 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
SCAPERQ9BY12 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC7.94□□□□□ -1.14
SCAPERQ9BY12 AL137918.1-201ENST00000624542 1922 ntBASIC7.94□□□□□ -1.14
SCAPERQ9BY12 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC7.94□□□□□ -1.14
SCAPERQ9BY12 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
SCAPERQ9BY12 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
SCAPERQ9BY12 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC7.94□□□□□ -1.14
SCAPERQ9BY12 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC7.94□□□□□ -1.14
SCAPERQ9BY12 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
SCAPERQ9BY12 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
SCAPERQ9BY12 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
SCAPERQ9BY12 SNORA70.2-201ENST00000364506 135 ntBASIC7.94□□□□□ -1.14
SCAPERQ9BY12 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC7.94□□□□□ -1.14
SCAPERQ9BY12 RPL11P3-201ENST00000395256 523 ntBASIC7.94□□□□□ -1.14
SCAPERQ9BY12 OR5M12P-201ENST00000423388 929 ntBASIC7.94□□□□□ -1.14
SCAPERQ9BY12 IGBP1P3-201ENST00000447449 1000 ntBASIC7.94□□□□□ -1.14
SCAPERQ9BY12 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC7.94□□□□□ -1.14
SCAPERQ9BY12 AC026979.1-201ENST00000492525 396 ntBASIC7.94□□□□□ -1.14
SCAPERQ9BY12 AC012400.1-201ENST00000518452 381 ntBASIC7.94□□□□□ -1.14
SCAPERQ9BY12 OR7E128P-201ENST00000532736 1024 ntBASIC7.94□□□□□ -1.14
SCAPERQ9BY12 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
SCAPERQ9BY12 MIR3667-201ENST00000581025 74 ntBASIC7.94□□□□□ -1.14
SCAPERQ9BY12 TEX41-238ENST00000604253 709 ntTSL 5 BASIC7.94□□□□□ -1.14
SCAPERQ9BY12 AP005131.7-201ENST00000610087 611 ntBASIC7.94□□□□□ -1.14
SCAPERQ9BY12 ZNRD1ASP-221ENST00000637794 1074 ntBASIC7.94□□□□□ -1.14
SCAPERQ9BY12 AC073869.8-201ENST00000641806 335 ntBASIC7.94□□□□□ -1.14
SCAPERQ9BY12 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
SCAPERQ9BY12 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
SCAPERQ9BY12 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
SCAPERQ9BY12 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC7.93□□□□□ -1.14
SCAPERQ9BY12 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC7.93□□□□□ -1.14
SCAPERQ9BY12 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
SCAPERQ9BY12 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
SCAPERQ9BY12 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
SCAPERQ9BY12 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
SCAPERQ9BY12 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC7.93□□□□□ -1.14
SCAPERQ9BY12 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
SCAPERQ9BY12 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC7.93□□□□□ -1.14
SCAPERQ9BY12 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
SCAPERQ9BY12 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
SCAPERQ9BY12 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
SCAPERQ9BY12 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
SCAPERQ9BY12 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC7.93□□□□□ -1.14
SCAPERQ9BY12 AC012512.1-201ENST00000446594 718 ntBASIC7.93□□□□□ -1.14
SCAPERQ9BY12 AC103987.1-201ENST00000473394 348 ntBASIC7.93□□□□□ -1.14
SCAPERQ9BY12 COX6B1P5-201ENST00000509843 249 ntBASIC7.93□□□□□ -1.14
SCAPERQ9BY12 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC7.93□□□□□ -1.14
SCAPERQ9BY12 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
SCAPERQ9BY12 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC7.93□□□□□ -1.14
SCAPERQ9BY12 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
SCAPERQ9BY12 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
SCAPERQ9BY12 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
SCAPERQ9BY12 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
SCAPERQ9BY12 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC7.92□□□□□ -1.14
SCAPERQ9BY12 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC7.92□□□□□ -1.14
SCAPERQ9BY12 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
SCAPERQ9BY12 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC7.92□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms