Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.56□□□□□ -1.52
SNX18Q96RF0 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC5.56□□□□□ -1.52
SNX18Q96RF0 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC5.56□□□□□ -1.52
SNX18Q96RF0 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SNX18Q96RF0 Z83846.1-201ENST00000446798 265 ntBASIC5.56□□□□□ -1.52
SNX18Q96RF0 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.56□□□□□ -1.52
SNX18Q96RF0 RN7SL39P-201ENST00000462264 297 ntBASIC5.56□□□□□ -1.52
SNX18Q96RF0 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.56□□□□□ -1.52
SNX18Q96RF0 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.56□□□□□ -1.52
SNX18Q96RF0 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC5.56□□□□□ -1.52
SNX18Q96RF0 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC5.56□□□□□ -1.52
SNX18Q96RF0 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.56□□□□□ -1.52
SNX18Q96RF0 RFESD-208ENST00000513950 464 ntTSL 5 BASIC5.56□□□□□ -1.52
SNX18Q96RF0 RNA5SP418-201ENST00000515951 117 ntBASIC5.56□□□□□ -1.52
SNX18Q96RF0 RN7SKP70-201ENST00000516655 271 ntBASIC5.56□□□□□ -1.52
SNX18Q96RF0 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.56□□□□□ -1.52
SNX18Q96RF0 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC5.56□□□□□ -1.52
SNX18Q96RF0 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC5.56□□□□□ -1.52
SNX18Q96RF0 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.56□□□□□ -1.52
SNX18Q96RF0 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC5.56□□□□□ -1.52
SNX18Q96RF0 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.56□□□□□ -1.52
SNX18Q96RF0 AC040904.1-201ENST00000590850 223 ntBASIC5.56□□□□□ -1.52
SNX18Q96RF0 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.56□□□□□ -1.52
SNX18Q96RF0 AL589765.6-201ENST00000601909 549 ntBASIC5.56□□□□□ -1.52
SNX18Q96RF0 AC113368.1-201ENST00000603736 382 ntBASIC5.56□□□□□ -1.52
SNX18Q96RF0 AC004890.3-201ENST00000605566 1095 ntBASIC5.56□□□□□ -1.52
SNX18Q96RF0 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.56□□□□□ -1.52
SNX18Q96RF0 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.56□□□□□ -1.52
SNX18Q96RF0 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.56□□□□□ -1.52
SNX18Q96RF0 AL591926.1-201ENST00000620542 217 ntBASIC5.56□□□□□ -1.52
SNX18Q96RF0 AC011330.2-201ENST00000621680 635 ntBASIC5.56□□□□□ -1.52
SNX18Q96RF0 AC105105.5-201ENST00000622635 1294 ntBASIC5.56□□□□□ -1.52
SNX18Q96RF0 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.56□□□□□ -1.52
SNX18Q96RF0 AC083865.1-201ENST00000636634 831 ntBASIC5.56□□□□□ -1.52
SNX18Q96RF0 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SNX18Q96RF0 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SNX18Q96RF0 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
SNX18Q96RF0 AC011416.1-201ENST00000514947 1732 ntBASIC5.56□□□□□ -1.52
SNX18Q96RF0 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SNX18Q96RF0 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.56□□□□□ -1.52
SNX18Q96RF0 AC007382.1-201ENST00000624376 2618 ntBASIC5.56□□□□□ -1.52
SNX18Q96RF0 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.56□□□□□ -1.52
SNX18Q96RF0 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SNX18Q96RF0 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SNX18Q96RF0 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SNX18Q96RF0 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.55□□□□□ -1.52
SNX18Q96RF0 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
SNX18Q96RF0 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.55□□□□□ -1.52
SNX18Q96RF0 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.55□□□□□ -1.52
SNX18Q96RF0 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.55□□□□□ -1.52
SNX18Q96RF0 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
SNX18Q96RF0 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
SNX18Q96RF0 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.55□□□□□ -1.52
SNX18Q96RF0 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SNX18Q96RF0 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
SNX18Q96RF0 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.55□□□□□ -1.52
SNX18Q96RF0 SNORD1C-201ENST00000363315 78 ntBASIC5.55□□□□□ -1.52
SNX18Q96RF0 SNORA43.1-201ENST00000364863 140 ntBASIC5.55□□□□□ -1.52
SNX18Q96RF0 RN7SKP121-201ENST00000410842 305 ntBASIC5.55□□□□□ -1.52
SNX18Q96RF0 RPL26P37-201ENST00000411983 438 ntBASIC5.55□□□□□ -1.52
SNX18Q96RF0 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.55□□□□□ -1.52
SNX18Q96RF0 AL360013.1-201ENST00000419031 858 ntBASIC5.55□□□□□ -1.52
SNX18Q96RF0 SLC4A1APP1-201ENST00000419995 602 ntBASIC5.55□□□□□ -1.52
SNX18Q96RF0 AL354707.3-201ENST00000427308 331 ntBASIC5.55□□□□□ -1.52
SNX18Q96RF0 AC093422.3-201ENST00000428506 305 ntBASIC5.55□□□□□ -1.52
SNX18Q96RF0 NPM1P18-201ENST00000434232 732 ntBASIC5.55□□□□□ -1.52
SNX18Q96RF0 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.55□□□□□ -1.52
SNX18Q96RF0 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC5.55□□□□□ -1.52
SNX18Q96RF0 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
SNX18Q96RF0 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.55□□□□□ -1.52
SNX18Q96RF0 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC5.55□□□□□ -1.52
SNX18Q96RF0 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC5.55□□□□□ -1.52
SNX18Q96RF0 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.55□□□□□ -1.52
SNX18Q96RF0 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SNX18Q96RF0 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC5.55□□□□□ -1.52
SNX18Q96RF0 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC5.55□□□□□ -1.52
SNX18Q96RF0 AC008945.1-201ENST00000505144 499 ntBASIC5.55□□□□□ -1.52
SNX18Q96RF0 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC5.55□□□□□ -1.52
SNX18Q96RF0 AC133963.2-201ENST00000513686 578 ntBASIC5.55□□□□□ -1.52
SNX18Q96RF0 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC5.55□□□□□ -1.52
SNX18Q96RF0 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SNX18Q96RF0 AC011853.1-201ENST00000518911 454 ntBASIC5.55□□□□□ -1.52
SNX18Q96RF0 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.55□□□□□ -1.52
SNX18Q96RF0 AC135983.3-201ENST00000528049 1226 ntBASIC5.55□□□□□ -1.52
SNX18Q96RF0 OR4A43P-201ENST00000532938 908 ntBASIC5.55□□□□□ -1.52
SNX18Q96RF0 AP000916.1-201ENST00000533869 835 ntBASIC5.55□□□□□ -1.52
SNX18Q96RF0 AP001858.2-201ENST00000536213 601 ntBASIC5.55□□□□□ -1.52
SNX18Q96RF0 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.55□□□□□ -1.52
SNX18Q96RF0 OR4U1P-201ENST00000554958 912 ntBASIC5.55□□□□□ -1.52
SNX18Q96RF0 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC5.55□□□□□ -1.52
SNX18Q96RF0 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.55□□□□□ -1.52
SNX18Q96RF0 AC020916.2-201ENST00000591242 360 ntBASIC5.55□□□□□ -1.52
SNX18Q96RF0 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC5.55□□□□□ -1.52
SNX18Q96RF0 MTCO2P22-201ENST00000603246 681 ntBASIC5.55□□□□□ -1.52
SNX18Q96RF0 AC013444.2-201ENST00000603317 787 ntBASIC5.55□□□□□ -1.52
SNX18Q96RF0 AC002487.1-201ENST00000604565 994 ntBASIC5.55□□□□□ -1.52
SNX18Q96RF0 AC093673.2-201ENST00000609674 331 ntBASIC5.55□□□□□ -1.52
SNX18Q96RF0 AC245100.7-201ENST00000609678 442 ntBASIC5.55□□□□□ -1.52
SNX18Q96RF0 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.55□□□□□ -1.52
SNX18Q96RF0 MIR6071-201ENST00000616741 78 ntBASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms