Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
GAFA1Q96PS6 AC004158.1-201ENST00000564508 4319 ntBASIC4.35□□□□□ -1.71
GAFA1Q96PS6 AC109446.4-201ENST00000623235 2755 ntBASIC4.35□□□□□ -1.71
GAFA1Q96PS6 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
GAFA1Q96PS6 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.35□□□□□ -1.71
GAFA1Q96PS6 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC4.35□□□□□ -1.71
GAFA1Q96PS6 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
GAFA1Q96PS6 RNA5SP223-201ENST00000365174 120 ntBASIC4.35□□□□□ -1.71
GAFA1Q96PS6 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
GAFA1Q96PS6 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
GAFA1Q96PS6 RNU1-74P-201ENST00000384108 171 ntBASIC4.35□□□□□ -1.71
GAFA1Q96PS6 RNU6-171P-201ENST00000384354 107 ntBASIC4.35□□□□□ -1.71
GAFA1Q96PS6 RPL7P58-201ENST00000402913 758 ntBASIC4.35□□□□□ -1.71
GAFA1Q96PS6 DUTP5-201ENST00000406790 469 ntBASIC4.35□□□□□ -1.71
GAFA1Q96PS6 AC068138.1-201ENST00000412635 217 ntBASIC4.35□□□□□ -1.71
GAFA1Q96PS6 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.35□□□□□ -1.71
GAFA1Q96PS6 AL355433.1-201ENST00000422804 300 ntBASIC4.35□□□□□ -1.71
GAFA1Q96PS6 EI24P4-201ENST00000423683 1078 ntBASIC4.35□□□□□ -1.71
GAFA1Q96PS6 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.35□□□□□ -1.71
GAFA1Q96PS6 GAPDHP58-201ENST00000438477 1006 ntBASIC4.35□□□□□ -1.71
GAFA1Q96PS6 RPS29P10-201ENST00000439197 166 ntBASIC4.35□□□□□ -1.71
GAFA1Q96PS6 RN7SL172P-201ENST00000460535 303 ntBASIC4.35□□□□□ -1.71
GAFA1Q96PS6 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
GAFA1Q96PS6 AC098976.1-201ENST00000513014 541 ntBASIC4.35□□□□□ -1.71
GAFA1Q96PS6 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC4.35□□□□□ -1.71
GAFA1Q96PS6 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC4.35□□□□□ -1.71
GAFA1Q96PS6 AC024940.3-201ENST00000538551 316 ntBASIC4.35□□□□□ -1.71
GAFA1Q96PS6 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
GAFA1Q96PS6 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
GAFA1Q96PS6 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
GAFA1Q96PS6 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.35□□□□□ -1.71
GAFA1Q96PS6 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
GAFA1Q96PS6 MTCYBP13-201ENST00000578634 1093 ntBASIC4.35□□□□□ -1.71
GAFA1Q96PS6 MIR1269B-201ENST00000580405 75 ntBASIC4.35□□□□□ -1.71
GAFA1Q96PS6 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
GAFA1Q96PS6 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.35□□□□□ -1.71
GAFA1Q96PS6 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.35□□□□□ -1.71
GAFA1Q96PS6 SUMO2P15-201ENST00000604285 278 ntBASIC4.35□□□□□ -1.71
GAFA1Q96PS6 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC4.35□□□□□ -1.71
GAFA1Q96PS6 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC4.35□□□□□ -1.71
GAFA1Q96PS6 AL512624.1-201ENST00000613638 469 ntBASIC4.35□□□□□ -1.71
GAFA1Q96PS6 AC118658.2-201ENST00000618697 459 ntBASIC4.35□□□□□ -1.71
GAFA1Q96PS6 AC135068.12-201ENST00000637370 931 ntBASIC4.35□□□□□ -1.71
GAFA1Q96PS6 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC4.35□□□□□ -1.71
GAFA1Q96PS6 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
GAFA1Q96PS6 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
GAFA1Q96PS6 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
GAFA1Q96PS6 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
GAFA1Q96PS6 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
GAFA1Q96PS6 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
GAFA1Q96PS6 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
GAFA1Q96PS6 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
GAFA1Q96PS6 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
GAFA1Q96PS6 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
GAFA1Q96PS6 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.34□□□□□ -1.71
GAFA1Q96PS6 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
GAFA1Q96PS6 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
GAFA1Q96PS6 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.34□□□□□ -1.71
GAFA1Q96PS6 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
GAFA1Q96PS6 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
GAFA1Q96PS6 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
GAFA1Q96PS6 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.34□□□□□ -1.71
GAFA1Q96PS6 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
GAFA1Q96PS6 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
GAFA1Q96PS6 NUDT19P3-201ENST00000404698 555 ntBASIC4.34□□□□□ -1.71
GAFA1Q96PS6 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC4.34□□□□□ -1.71
GAFA1Q96PS6 GTF3AP1-201ENST00000416942 1004 ntBASIC4.34□□□□□ -1.71
GAFA1Q96PS6 HYALP1-201ENST00000417674 1279 ntBASIC4.34□□□□□ -1.71
GAFA1Q96PS6 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.34□□□□□ -1.71
GAFA1Q96PS6 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.34□□□□□ -1.71
GAFA1Q96PS6 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC4.34□□□□□ -1.71
GAFA1Q96PS6 GAPDHP14-201ENST00000450472 937 ntBASIC4.34□□□□□ -1.71
GAFA1Q96PS6 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.34□□□□□ -1.71
GAFA1Q96PS6 RN7SL30P-201ENST00000488416 306 ntBASIC4.34□□□□□ -1.71
GAFA1Q96PS6 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.34□□□□□ -1.71
GAFA1Q96PS6 HIGD1AP14-201ENST00000507617 282 ntBASIC4.34□□□□□ -1.71
GAFA1Q96PS6 AC093815.1-201ENST00000508637 280 ntBASIC4.34□□□□□ -1.71
GAFA1Q96PS6 AC016559.2-201ENST00000510759 359 ntBASIC4.34□□□□□ -1.71
GAFA1Q96PS6 EIF3KP3-201ENST00000514461 639 ntBASIC4.34□□□□□ -1.71
GAFA1Q96PS6 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC4.34□□□□□ -1.71
GAFA1Q96PS6 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.34□□□□□ -1.71
GAFA1Q96PS6 AC027369.5-201ENST00000533838 755 ntBASIC4.34□□□□□ -1.71
GAFA1Q96PS6 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
GAFA1Q96PS6 AC134349.2-201ENST00000535136 910 ntBASIC4.34□□□□□ -1.71
GAFA1Q96PS6 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.34□□□□□ -1.71
GAFA1Q96PS6 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
GAFA1Q96PS6 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.34□□□□□ -1.71
GAFA1Q96PS6 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.34□□□□□ -1.71
GAFA1Q96PS6 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.34□□□□□ -1.71
GAFA1Q96PS6 AP005131.7-201ENST00000610087 611 ntBASIC4.34□□□□□ -1.71
GAFA1Q96PS6 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.34□□□□□ -1.71
GAFA1Q96PS6 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.34□□□□□ -1.71
GAFA1Q96PS6 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.34□□□□□ -1.71
GAFA1Q96PS6 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.34□□□□□ -1.71
GAFA1Q96PS6 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.34□□□□□ -1.71
GAFA1Q96PS6 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
GAFA1Q96PS6 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.71
GAFA1Q96PS6 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
GAFA1Q96PS6 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.34□□□□□ -1.71
GAFA1Q96PS6 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms