Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
VPS50Q96JG6 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
VPS50Q96JG6 LYARP1-201ENST00000436977 1501 ntBASIC5.84□□□□□ -1.47
VPS50Q96JG6 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
VPS50Q96JG6 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
VPS50Q96JG6 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
VPS50Q96JG6 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
VPS50Q96JG6 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.84□□□□□ -1.47
VPS50Q96JG6 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
VPS50Q96JG6 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
VPS50Q96JG6 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
VPS50Q96JG6 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
VPS50Q96JG6 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
VPS50Q96JG6 RNU6-1251P-201ENST00000364502 107 ntBASIC5.84□□□□□ -1.47
VPS50Q96JG6 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
VPS50Q96JG6 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
VPS50Q96JG6 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
VPS50Q96JG6 MTCO2P8-201ENST00000412213 658 ntBASIC5.84□□□□□ -1.47
VPS50Q96JG6 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.84□□□□□ -1.47
VPS50Q96JG6 CDY17P-201ENST00000414121 1282 ntBASIC5.84□□□□□ -1.47
VPS50Q96JG6 AL158827.1-201ENST00000416300 391 ntBASIC5.84□□□□□ -1.47
VPS50Q96JG6 GLUD1P9-201ENST00000420997 1173 ntBASIC5.84□□□□□ -1.47
VPS50Q96JG6 CDY8P-201ENST00000428380 1279 ntBASIC5.84□□□□□ -1.47
VPS50Q96JG6 BX119321.1-201ENST00000428912 797 ntBASIC5.84□□□□□ -1.47
VPS50Q96JG6 TRBV26OR9-2-201ENST00000432077 293 ntBASIC5.84□□□□□ -1.47
VPS50Q96JG6 MTND2P2-201ENST00000434633 945 ntBASIC5.84□□□□□ -1.47
VPS50Q96JG6 ARAFP2-201ENST00000440565 559 ntBASIC5.84□□□□□ -1.47
VPS50Q96JG6 RPL5P25-201ENST00000441148 775 ntBASIC5.84□□□□□ -1.47
VPS50Q96JG6 MTCYBP21-201ENST00000443300 1113 ntBASIC5.84□□□□□ -1.47
VPS50Q96JG6 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC5.84□□□□□ -1.47
VPS50Q96JG6 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.84□□□□□ -1.47
VPS50Q96JG6 CDY20P-201ENST00000447528 1279 ntBASIC5.84□□□□□ -1.47
VPS50Q96JG6 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
VPS50Q96JG6 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.84□□□□□ -1.47
VPS50Q96JG6 CFL1P4-201ENST00000451536 498 ntBASIC5.84□□□□□ -1.47
VPS50Q96JG6 AC002553.3-201ENST00000453002 341 ntBASIC5.84□□□□□ -1.47
VPS50Q96JG6 AC016724.1-201ENST00000453215 421 ntBASIC5.84□□□□□ -1.47
VPS50Q96JG6 PPIAP7-201ENST00000454070 489 ntBASIC5.84□□□□□ -1.47
VPS50Q96JG6 AC239798.3-201ENST00000454459 408 ntBASIC5.84□□□□□ -1.47
VPS50Q96JG6 AL133351.3-201ENST00000454998 193 ntBASIC5.84□□□□□ -1.47
VPS50Q96JG6 RANP2-201ENST00000456833 229 ntBASIC5.84□□□□□ -1.47
VPS50Q96JG6 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.84□□□□□ -1.47
VPS50Q96JG6 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.84□□□□□ -1.47
VPS50Q96JG6 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.84□□□□□ -1.47
VPS50Q96JG6 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
VPS50Q96JG6 RN7SL423P-201ENST00000486202 304 ntBASIC5.84□□□□□ -1.47
VPS50Q96JG6 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.84□□□□□ -1.47
VPS50Q96JG6 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC5.84□□□□□ -1.47
VPS50Q96JG6 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.84□□□□□ -1.47
VPS50Q96JG6 UGT2A3P7-201ENST00000510485 734 ntBASIC5.84□□□□□ -1.47
VPS50Q96JG6 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
VPS50Q96JG6 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
VPS50Q96JG6 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.84□□□□□ -1.47
VPS50Q96JG6 AP000620.1-201ENST00000527147 504 ntBASIC5.84□□□□□ -1.47
VPS50Q96JG6 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.84□□□□□ -1.47
VPS50Q96JG6 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC5.84□□□□□ -1.47
VPS50Q96JG6 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC5.84□□□□□ -1.47
VPS50Q96JG6 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.84□□□□□ -1.47
VPS50Q96JG6 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.84□□□□□ -1.47
VPS50Q96JG6 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
VPS50Q96JG6 AC007956.1-201ENST00000555623 542 ntBASIC5.84□□□□□ -1.47
VPS50Q96JG6 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.84□□□□□ -1.47
VPS50Q96JG6 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
VPS50Q96JG6 MIR4701-201ENST00000583094 63 ntBASIC5.84□□□□□ -1.47
VPS50Q96JG6 AC027229.1-201ENST00000583887 253 ntBASIC5.84□□□□□ -1.47
VPS50Q96JG6 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC5.84□□□□□ -1.47
VPS50Q96JG6 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.84□□□□□ -1.47
VPS50Q96JG6 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC5.84□□□□□ -1.47
VPS50Q96JG6 AL451049.1-201ENST00000608672 497 ntBASIC5.84□□□□□ -1.47
VPS50Q96JG6 AC006924.1-201ENST00000610750 559 ntBASIC5.84□□□□□ -1.47
VPS50Q96JG6 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.84□□□□□ -1.47
VPS50Q96JG6 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC5.84□□□□□ -1.47
VPS50Q96JG6 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
VPS50Q96JG6 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.84□□□□□ -1.47
VPS50Q96JG6 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
VPS50Q96JG6 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.48
VPS50Q96JG6 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.84□□□□□ -1.48
VPS50Q96JG6 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
VPS50Q96JG6 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
VPS50Q96JG6 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
VPS50Q96JG6 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
VPS50Q96JG6 AL356317.1-201ENST00000396110 1436 ntBASIC5.83□□□□□ -1.48
VPS50Q96JG6 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
VPS50Q96JG6 RNU1-134P-201ENST00000362935 165 ntBASIC5.83□□□□□ -1.48
VPS50Q96JG6 AL445238.1-204ENST00000400311 463 ntBASIC5.83□□□□□ -1.48
VPS50Q96JG6 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.83□□□□□ -1.48
VPS50Q96JG6 HYALP1-201ENST00000417674 1279 ntBASIC5.83□□□□□ -1.48
VPS50Q96JG6 AL121878.1-201ENST00000418638 859 ntBASIC5.83□□□□□ -1.48
VPS50Q96JG6 AC106883.1-201ENST00000418805 562 ntBASIC5.83□□□□□ -1.48
VPS50Q96JG6 AL606495.1-201ENST00000422100 813 ntBASIC5.83□□□□□ -1.48
VPS50Q96JG6 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC5.83□□□□□ -1.48
VPS50Q96JG6 AL731534.1-201ENST00000434711 269 ntBASIC5.83□□□□□ -1.48
VPS50Q96JG6 RPS3AP38-201ENST00000435889 763 ntBASIC5.83□□□□□ -1.48
VPS50Q96JG6 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.83□□□□□ -1.48
VPS50Q96JG6 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.83□□□□□ -1.48
VPS50Q96JG6 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC5.83□□□□□ -1.48
VPS50Q96JG6 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC5.83□□□□□ -1.48
VPS50Q96JG6 AC073594.1-201ENST00000462065 364 ntBASIC5.83□□□□□ -1.48
VPS50Q96JG6 AC008410.1-201ENST00000483777 339 ntBASIC5.83□□□□□ -1.48
VPS50Q96JG6 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms