Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 GNG5P1-201ENST00000255500 204 ntBASIC7.88□□□□□ -1.15
HLA-CQ95604 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
HLA-CQ95604 OR2M1P-201ENST00000318104 951 ntBASIC7.88□□□□□ -1.15
HLA-CQ95604 OR5D18-201ENST00000333976 991 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
HLA-CQ95604 RNU6-582P-201ENST00000362989 107 ntBASIC7.88□□□□□ -1.15
HLA-CQ95604 RNU6-666P-201ENST00000363499 107 ntBASIC7.88□□□□□ -1.15
HLA-CQ95604 RN7SKP250-201ENST00000363924 321 ntBASIC7.88□□□□□ -1.15
HLA-CQ95604 RN7SKP171-201ENST00000364417 303 ntBASIC7.88□□□□□ -1.15
HLA-CQ95604 RNU1-39P-201ENST00000383897 165 ntBASIC7.88□□□□□ -1.15
HLA-CQ95604 RNU6-510P-201ENST00000391239 108 ntBASIC7.88□□□□□ -1.15
HLA-CQ95604 PDCL3P5-201ENST00000398028 722 ntBASIC7.88□□□□□ -1.15
HLA-CQ95604 TXNP7-201ENST00000406296 293 ntBASIC7.88□□□□□ -1.15
HLA-CQ95604 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC7.88□□□□□ -1.15
HLA-CQ95604 MTCO2P5-201ENST00000422621 426 ntBASIC7.88□□□□□ -1.15
HLA-CQ95604 RPL7P57-201ENST00000423238 740 ntBASIC7.88□□□□□ -1.15
HLA-CQ95604 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC7.88□□□□□ -1.15
HLA-CQ95604 GPM6BP2-201ENST00000432046 144 ntBASIC7.88□□□□□ -1.15
HLA-CQ95604 AL389925.1-201ENST00000432257 728 ntBASIC7.88□□□□□ -1.15
HLA-CQ95604 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC7.88□□□□□ -1.15
HLA-CQ95604 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
HLA-CQ95604 AL031316.1-202ENST00000441672 449 ntTSL 3 BASIC7.88□□□□□ -1.15
HLA-CQ95604 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC7.88□□□□□ -1.15
HLA-CQ95604 GPM6BP1-201ENST00000446387 144 ntBASIC7.88□□□□□ -1.15
HLA-CQ95604 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC7.88□□□□□ -1.15
HLA-CQ95604 AL445991.1-201ENST00000450381 475 ntBASIC7.88□□□□□ -1.15
HLA-CQ95604 AL590639.1-201ENST00000456484 337 ntBASIC7.88□□□□□ -1.15
HLA-CQ95604 NF1P3-201ENST00000457709 450 ntBASIC7.88□□□□□ -1.15
HLA-CQ95604 PSMC1P13-201ENST00000458195 985 ntBASIC7.88□□□□□ -1.15
HLA-CQ95604 RN7SL393P-201ENST00000463588 296 ntBASIC7.88□□□□□ -1.15
HLA-CQ95604 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
HLA-CQ95604 AC009567.2-201ENST00000502989 349 ntBASIC7.88□□□□□ -1.15
HLA-CQ95604 RNU7-30P-201ENST00000516835 62 ntBASIC7.88□□□□□ -1.15
HLA-CQ95604 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC7.88□□□□□ -1.15
HLA-CQ95604 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC7.88□□□□□ -1.15
HLA-CQ95604 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC7.88□□□□□ -1.15
HLA-CQ95604 LRP1-AS-201ENST00000554476 325 ntTSL 3 BASIC7.88□□□□□ -1.15
HLA-CQ95604 RPS7P1-201ENST00000571702 585 ntBASIC7.88□□□□□ -1.15
HLA-CQ95604 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC7.88□□□□□ -1.15
HLA-CQ95604 FAM106CP-201ENST00000582212 507 ntBASIC7.88□□□□□ -1.15
HLA-CQ95604 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC7.88□□□□□ -1.15
HLA-CQ95604 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC7.88□□□□□ -1.15
HLA-CQ95604 CKS1BP3-201ENST00000600888 237 ntBASIC7.88□□□□□ -1.15
HLA-CQ95604 LINC01742-201ENST00000616333 628 ntTSL 3 BASIC7.88□□□□□ -1.15
HLA-CQ95604 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC7.88□□□□□ -1.15
HLA-CQ95604 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC7.88□□□□□ -1.15
HLA-CQ95604 AC231657.1-201ENST00000624313 397 ntBASIC7.88□□□□□ -1.15
HLA-CQ95604 AC026336.5-201ENST00000624455 738 ntBASIC7.88□□□□□ -1.15
HLA-CQ95604 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC7.88□□□□□ -1.15
HLA-CQ95604 AC026108.1-201ENST00000635444 547 ntBASIC7.88□□□□□ -1.15
HLA-CQ95604 CUBNP1-201ENST00000412710 1790 ntBASIC7.88□□□□□ -1.15
HLA-CQ95604 AL136140.2-201ENST00000624717 1705 ntBASIC7.88□□□□□ -1.15
HLA-CQ95604 CLEC1A-201ENST00000315330 2685 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
HLA-CQ95604 HSP90AB2P-201ENST00000507090 2176 ntBASIC7.88□□□□□ -1.15
HLA-CQ95604 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
HLA-CQ95604 DARS2-201ENST00000361951 3506 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
HLA-CQ95604 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC7.88□□□□□ -1.15
HLA-CQ95604 LDB2-201ENST00000304523 2548 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
HLA-CQ95604 AC087203.2-201ENST00000526502 1587 ntBASIC7.88□□□□□ -1.15
HLA-CQ95604 CEACAM7-201ENST00000006724 2489 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
HLA-CQ95604 XIAP-202ENST00000371199 8591 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
HLA-CQ95604 ZNF331-216ENST00000511593 1985 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
HLA-CQ95604 AMBN-202ENST00000449493 1512 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
HLA-CQ95604 LRRC37A-202ENST00000393465 4997 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
HLA-CQ95604 BTBD3-215ENST00000618918 4486 ntAPPRIS ALT1 TSL 4 BASIC7.88□□□□□ -1.15
HLA-CQ95604 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
HLA-CQ95604 KCNMB2-201ENST00000358316 2271 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
HLA-CQ95604 MCPH1-201ENST00000344683 8039 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
HLA-CQ95604 AMPH-202ENST00000356264 3418 ntAPPRIS P3 TSL 1 (best) BASIC7.87□□□□□ -1.15
HLA-CQ95604 SNHG14-226ENST00000640631 13074 ntTSL 5 BASIC7.87□□□□□ -1.15
HLA-CQ95604 TMEM167A-201ENST00000502346 4630 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
HLA-CQ95604 OPALIN-205ENST00000536387 3392 ntTSL 3 BASIC7.87□□□□□ -1.15
HLA-CQ95604 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC7.87□□□□□ -1.15
HLA-CQ95604 GTF2H1-210ENST00000530496 1700 ntTSL 2 BASIC7.87□□□□□ -1.15
HLA-CQ95604 PLA2G7-202ENST00000537365 1747 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
HLA-CQ95604 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
HLA-CQ95604 TNFRSF10D-201ENST00000312584 3538 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
HLA-CQ95604 PIWIL3-201ENST00000332271 3504 ntAPPRIS P2 TSL 1 (best) BASIC7.87□□□□□ -1.15
HLA-CQ95604 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
HLA-CQ95604 RNU1-122P-201ENST00000365538 156 ntBASIC7.87□□□□□ -1.15
HLA-CQ95604 SNORD94-201ENST00000386037 137 ntBASIC7.87□□□□□ -1.15
HLA-CQ95604 VN1R8P-201ENST00000407739 893 ntBASIC7.87□□□□□ -1.15
HLA-CQ95604 MIR1305-201ENST00000408300 86 ntBASIC7.87□□□□□ -1.15
HLA-CQ95604 RNU2-8P-201ENST00000410727 190 ntBASIC7.87□□□□□ -1.15
HLA-CQ95604 ELOCP4-201ENST00000420090 333 ntBASIC7.87□□□□□ -1.15
HLA-CQ95604 AC006509.1-201ENST00000420788 634 ntBASIC7.87□□□□□ -1.15
HLA-CQ95604 AL353193.1-201ENST00000421444 268 ntBASIC7.87□□□□□ -1.15
HLA-CQ95604 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
HLA-CQ95604 DPY19L1P2-201ENST00000426647 915 ntBASIC7.87□□□□□ -1.15
HLA-CQ95604 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
HLA-CQ95604 NPM1P34-201ENST00000428821 893 ntBASIC7.87□□□□□ -1.15
HLA-CQ95604 AC002504.1-201ENST00000438281 691 ntBASIC7.87□□□□□ -1.15
HLA-CQ95604 RPL23AP16-201ENST00000441715 421 ntBASIC7.87□□□□□ -1.15
HLA-CQ95604 AC023274.2-201ENST00000445264 521 ntBASIC7.87□□□□□ -1.15
HLA-CQ95604 AL935212.3-201ENST00000450729 284 ntBASIC7.87□□□□□ -1.15
HLA-CQ95604 AC144530.1-201ENST00000452862 555 ntBASIC7.87□□□□□ -1.15
HLA-CQ95604 RNU6-261P-201ENST00000459506 102 ntBASIC7.87□□□□□ -1.15
HLA-CQ95604 MTCO2P29-201ENST00000465212 189 ntBASIC7.87□□□□□ -1.15
HLA-CQ95604 RPSAP48-201ENST00000466509 889 ntBASIC7.87□□□□□ -1.15
HLA-CQ95604 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC7.87□□□□□ -1.15
HLA-CQ95604 IGHVIII-25-1-201ENST00000522143 241 ntBASIC7.87□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms