Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 RN7SKP166-201ENST00000410812 305 ntBASIC6.72□□□□□ -1.33
ERCC4Q92889 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC6.72□□□□□ -1.33
ERCC4Q92889 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC6.72□□□□□ -1.33
ERCC4Q92889 Z68694.1-201ENST00000413929 841 ntBASIC6.72□□□□□ -1.33
ERCC4Q92889 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.72□□□□□ -1.33
ERCC4Q92889 RPL7AP51-201ENST00000422016 760 ntBASIC6.72□□□□□ -1.33
ERCC4Q92889 BX119904.1-201ENST00000432026 348 ntBASIC6.72□□□□□ -1.33
ERCC4Q92889 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC6.72□□□□□ -1.33
ERCC4Q92889 AC073410.1-201ENST00000435125 589 ntBASIC6.72□□□□□ -1.33
ERCC4Q92889 OR3D1P-201ENST00000438288 955 ntBASIC6.72□□□□□ -1.33
ERCC4Q92889 AL645936.1-201ENST00000441979 518 ntBASIC6.72□□□□□ -1.33
ERCC4Q92889 CBX1P5-201ENST00000475330 559 ntBASIC6.72□□□□□ -1.33
ERCC4Q92889 AC087672.1-201ENST00000479876 766 ntBASIC6.72□□□□□ -1.33
ERCC4Q92889 AP000563.1-201ENST00000490865 758 ntBASIC6.72□□□□□ -1.33
ERCC4Q92889 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
ERCC4Q92889 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
ERCC4Q92889 ST13P12-201ENST00000508958 1094 ntBASIC6.72□□□□□ -1.33
ERCC4Q92889 SETP21-201ENST00000514799 892 ntBASIC6.72□□□□□ -1.33
ERCC4Q92889 AC020937.1-201ENST00000519677 1013 ntBASIC6.72□□□□□ -1.33
ERCC4Q92889 AC116917.1-201ENST00000520558 305 ntBASIC6.72□□□□□ -1.33
ERCC4Q92889 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.72□□□□□ -1.33
ERCC4Q92889 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.72□□□□□ -1.33
ERCC4Q92889 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC6.72□□□□□ -1.33
ERCC4Q92889 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
ERCC4Q92889 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
ERCC4Q92889 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC6.72□□□□□ -1.33
ERCC4Q92889 AL356801.1-201ENST00000559320 294 ntBASIC6.72□□□□□ -1.33
ERCC4Q92889 AC104229.1-201ENST00000561364 255 ntBASIC6.72□□□□□ -1.33
ERCC4Q92889 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC6.72□□□□□ -1.33
ERCC4Q92889 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
ERCC4Q92889 AP001823.1-201ENST00000604056 1003 ntBASIC6.72□□□□□ -1.33
ERCC4Q92889 AP004372.1-201ENST00000604842 844 ntBASIC6.72□□□□□ -1.33
ERCC4Q92889 SNORA74.4-201ENST00000607595 199 ntBASIC6.72□□□□□ -1.33
ERCC4Q92889 AC093673.2-201ENST00000609674 331 ntBASIC6.72□□□□□ -1.33
ERCC4Q92889 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
ERCC4Q92889 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
ERCC4Q92889 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.72□□□□□ -1.33
ERCC4Q92889 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
ERCC4Q92889 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
ERCC4Q92889 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
ERCC4Q92889 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC6.72□□□□□ -1.33
ERCC4Q92889 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
ERCC4Q92889 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
ERCC4Q92889 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.33
ERCC4Q92889 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
ERCC4Q92889 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.71□□□□□ -1.33
ERCC4Q92889 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.34
ERCC4Q92889 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
ERCC4Q92889 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
ERCC4Q92889 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
ERCC4Q92889 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
ERCC4Q92889 RAD1P1-201ENST00000231383 813 ntBASIC6.71□□□□□ -1.34
ERCC4Q92889 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC6.71□□□□□ -1.34
ERCC4Q92889 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
ERCC4Q92889 RN7SKP250-201ENST00000363924 321 ntBASIC6.71□□□□□ -1.34
ERCC4Q92889 U3.10-201ENST00000364459 214 ntBASIC6.71□□□□□ -1.34
ERCC4Q92889 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
ERCC4Q92889 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.71□□□□□ -1.34
ERCC4Q92889 AL049545.1-201ENST00000401856 572 ntBASIC6.71□□□□□ -1.34
ERCC4Q92889 AL132875.1-201ENST00000403623 949 ntBASIC6.71□□□□□ -1.34
ERCC4Q92889 RNA5SP156-201ENST00000410250 110 ntBASIC6.71□□□□□ -1.34
ERCC4Q92889 RN7SKP144-201ENST00000411108 279 ntBASIC6.71□□□□□ -1.34
ERCC4Q92889 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC6.71□□□□□ -1.34
ERCC4Q92889 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.71□□□□□ -1.34
ERCC4Q92889 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC6.71□□□□□ -1.34
ERCC4Q92889 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
ERCC4Q92889 RPL5P2-201ENST00000429598 854 ntBASIC6.71□□□□□ -1.34
ERCC4Q92889 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC6.71□□□□□ -1.34
ERCC4Q92889 RPS12P17-201ENST00000438591 377 ntBASIC6.71□□□□□ -1.34
ERCC4Q92889 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC6.71□□□□□ -1.34
ERCC4Q92889 AC092647.3-201ENST00000443044 633 ntBASIC6.71□□□□□ -1.34
ERCC4Q92889 RN7SL552P-201ENST00000462094 276 ntBASIC6.71□□□□□ -1.34
ERCC4Q92889 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
ERCC4Q92889 RPL38P3-201ENST00000484463 213 ntBASIC6.71□□□□□ -1.34
ERCC4Q92889 AL117692.1-201ENST00000494283 713 ntBASIC6.71□□□□□ -1.34
ERCC4Q92889 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC6.71□□□□□ -1.34
ERCC4Q92889 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.71□□□□□ -1.34
ERCC4Q92889 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
ERCC4Q92889 GUSBP9-201ENST00000510138 584 ntBASIC6.71□□□□□ -1.34
ERCC4Q92889 AC090958.1-201ENST00000511122 351 ntBASIC6.71□□□□□ -1.34
ERCC4Q92889 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC6.71□□□□□ -1.34
ERCC4Q92889 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
ERCC4Q92889 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
ERCC4Q92889 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
ERCC4Q92889 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.71□□□□□ -1.34
ERCC4Q92889 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC6.71□□□□□ -1.34
ERCC4Q92889 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC6.71□□□□□ -1.34
ERCC4Q92889 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.71□□□□□ -1.34
ERCC4Q92889 MT1CP-201ENST00000567054 174 ntBASIC6.71□□□□□ -1.34
ERCC4Q92889 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.71□□□□□ -1.34
ERCC4Q92889 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.71□□□□□ -1.34
ERCC4Q92889 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC6.71□□□□□ -1.34
ERCC4Q92889 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.71□□□□□ -1.34
ERCC4Q92889 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
ERCC4Q92889 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC6.71□□□□□ -1.34
ERCC4Q92889 AC084373.1-201ENST00000603311 235 ntBASIC6.71□□□□□ -1.34
ERCC4Q92889 AC099785.1-201ENST00000605697 437 ntBASIC6.71□□□□□ -1.34
ERCC4Q92889 AC012213.4-201ENST00000606457 354 ntBASIC6.71□□□□□ -1.34
ERCC4Q92889 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC6.71□□□□□ -1.34
ERCC4Q92889 AC092954.1-201ENST00000609121 445 ntBASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms