Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC8.61□□□□□ -1.03
TOPBP1Q92547 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC8.61□□□□□ -1.03
TOPBP1Q92547 AC026402.1-201ENST00000513642 170 ntBASIC8.61□□□□□ -1.03
TOPBP1Q92547 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC8.61□□□□□ -1.03
TOPBP1Q92547 AC125494.2-201ENST00000602431 657 ntBASIC8.61□□□□□ -1.03
TOPBP1Q92547 SELE-204ENST00000367776 3576 ntTSL 5 BASIC8.61□□□□□ -1.03
TOPBP1Q92547 SELE-205ENST00000367777 3576 ntTSL 5 BASIC8.61□□□□□ -1.03
TOPBP1Q92547 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC8.61□□□□□ -1.03
TOPBP1Q92547 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
TOPBP1Q92547 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
TOPBP1Q92547 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
TOPBP1Q92547 U3.22-201ENST00000391120 215 ntBASIC8.6□□□□□ -1.03
TOPBP1Q92547 AL049697.2-201ENST00000403708 294 ntBASIC8.6□□□□□ -1.03
TOPBP1Q92547 TCEA1P1-201ENST00000449716 880 ntBASIC8.6□□□□□ -1.03
TOPBP1Q92547 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
TOPBP1Q92547 AC020915.5-201ENST00000596836 964 ntBASIC8.6□□□□□ -1.03
TOPBP1Q92547 MLECP1-201ENST00000615893 709 ntBASIC8.6□□□□□ -1.03
TOPBP1Q92547 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
TOPBP1Q92547 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
TOPBP1Q92547 PHIP-201ENST00000275034 10460 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
TOPBP1Q92547 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
TOPBP1Q92547 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC8.6□□□□□ -1.03
TOPBP1Q92547 ALB-214ENST00000509063 1911 ntTSL 5 BASIC8.6□□□□□ -1.03
TOPBP1Q92547 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
TOPBP1Q92547 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
TOPBP1Q92547 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
TOPBP1Q92547 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC8.6□□□□□ -1.03
TOPBP1Q92547 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
TOPBP1Q92547 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
TOPBP1Q92547 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
TOPBP1Q92547 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC8.6□□□□□ -1.03
TOPBP1Q92547 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
TOPBP1Q92547 SPA17-204ENST00000532692 4949 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
TOPBP1Q92547 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC8.59□□□□□ -1.03
TOPBP1Q92547 Z97832.1-201ENST00000402490 328 ntBASIC8.59□□□□□ -1.03
TOPBP1Q92547 IL6-206ENST00000407492 926 ntTSL 3 BASIC8.59□□□□□ -1.03
TOPBP1Q92547 CYP2AC1P-201ENST00000407830 1173 ntBASIC8.59□□□□□ -1.03
TOPBP1Q92547 AL592293.2-201ENST00000422292 996 ntBASIC8.59□□□□□ -1.03
TOPBP1Q92547 AC010326.1-201ENST00000462726 602 ntBASIC8.59□□□□□ -1.03
TOPBP1Q92547 RN7SL814P-201ENST00000487715 300 ntBASIC8.59□□□□□ -1.03
TOPBP1Q92547 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC8.59□□□□□ -1.03
TOPBP1Q92547 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC8.59□□□□□ -1.03
TOPBP1Q92547 AC060780.2-201ENST00000589047 198 ntBASIC8.59□□□□□ -1.03
TOPBP1Q92547 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC8.59□□□□□ -1.03
TOPBP1Q92547 AC005962.2-201ENST00000611427 652 ntBASIC8.59□□□□□ -1.03
TOPBP1Q92547 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
TOPBP1Q92547 AC021106.3-201ENST00000623925 531 ntBASIC8.59□□□□□ -1.03
TOPBP1Q92547 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC8.59□□□□□ -1.03
TOPBP1Q92547 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
TOPBP1Q92547 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
TOPBP1Q92547 ATP5A1P4-201ENST00000556888 1605 ntBASIC8.59□□□□□ -1.03
TOPBP1Q92547 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
TOPBP1Q92547 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
TOPBP1Q92547 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC8.59□□□□□ -1.03
TOPBP1Q92547 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
TOPBP1Q92547 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC8.59□□□□□ -1.03
TOPBP1Q92547 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
TOPBP1Q92547 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
TOPBP1Q92547 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
TOPBP1Q92547 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC8.59□□□□□ -1.03
TOPBP1Q92547 AC104066.2-201ENST00000564513 1741 ntTSL 3 BASIC8.59□□□□□ -1.03
TOPBP1Q92547 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC8.59□□□□□ -1.03
TOPBP1Q92547 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
TOPBP1Q92547 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
TOPBP1Q92547 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC8.59□□□□□ -1.03
TOPBP1Q92547 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
TOPBP1Q92547 OR8V1P-201ENST00000395193 873 ntBASIC8.59□□□□□ -1.03
TOPBP1Q92547 SNX10-203ENST00000409367 746 ntTSL 5 BASIC8.59□□□□□ -1.03
TOPBP1Q92547 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC8.59□□□□□ -1.03
TOPBP1Q92547 AF186996.5-201ENST00000418098 904 ntBASIC8.59□□□□□ -1.03
TOPBP1Q92547 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC8.59□□□□□ -1.03
TOPBP1Q92547 AC005154.2-201ENST00000438110 379 ntBASIC8.59□□□□□ -1.03
TOPBP1Q92547 AC013356.1-201ENST00000489027 564 ntBASIC8.59□□□□□ -1.03
TOPBP1Q92547 MAL2-201ENST00000522112 573 ntTSL 4 BASIC8.59□□□□□ -1.03
TOPBP1Q92547 AC012339.2-201ENST00000523996 453 ntBASIC8.59□□□□□ -1.03
TOPBP1Q92547 NPM1P42-201ENST00000560329 862 ntBASIC8.59□□□□□ -1.03
TOPBP1Q92547 AC108738.1-201ENST00000603703 237 ntBASIC8.59□□□□□ -1.03
TOPBP1Q92547 AC011944.2-201ENST00000624440 683 ntBASIC8.59□□□□□ -1.03
TOPBP1Q92547 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC8.59□□□□□ -1.03
TOPBP1Q92547 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
TOPBP1Q92547 AL137100.1-201ENST00000556703 1620 ntBASIC8.58□□□□□ -1.04
TOPBP1Q92547 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
TOPBP1Q92547 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC8.58□□□□□ -1.04
TOPBP1Q92547 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC8.58□□□□□ -1.04
TOPBP1Q92547 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
TOPBP1Q92547 OR9G4-201ENST00000302957 984 ntBASIC8.58□□□□□ -1.04
TOPBP1Q92547 AL590240.1-201ENST00000334118 313 ntBASIC8.58□□□□□ -1.04
TOPBP1Q92547 RNU4-39P-201ENST00000362455 127 ntBASIC8.58□□□□□ -1.04
TOPBP1Q92547 RNU1-59P-201ENST00000364829 162 ntBASIC8.58□□□□□ -1.04
TOPBP1Q92547 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
TOPBP1Q92547 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC8.58□□□□□ -1.04
TOPBP1Q92547 KCTD10P1-201ENST00000434203 625 ntBASIC8.58□□□□□ -1.04
TOPBP1Q92547 AC073143.1-201ENST00000436316 395 ntBASIC8.58□□□□□ -1.04
TOPBP1Q92547 CEACAMP6-201ENST00000452007 574 ntBASIC8.58□□□□□ -1.04
TOPBP1Q92547 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC8.58□□□□□ -1.04
TOPBP1Q92547 RN7SL319P-201ENST00000480656 221 ntBASIC8.58□□□□□ -1.04
TOPBP1Q92547 SCARNA22-201ENST00000503991 125 ntBASIC8.58□□□□□ -1.04
TOPBP1Q92547 AK3P4-201ENST00000504283 583 ntBASIC8.58□□□□□ -1.04
TOPBP1Q92547 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC8.58□□□□□ -1.04
TOPBP1Q92547 FGB-207ENST00000509493 1164 ntTSL 5 BASIC8.58□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms