Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AC108075.1-201ENST00000424692 529 ntBASIC5.47□□□□□ -1.53
SHROOM3Q8TF72 AL161722.2-201ENST00000434731 981 ntBASIC5.47□□□□□ -1.53
SHROOM3Q8TF72 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.47□□□□□ -1.53
SHROOM3Q8TF72 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.47□□□□□ -1.53
SHROOM3Q8TF72 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.47□□□□□ -1.53
SHROOM3Q8TF72 HIGD1AP8-201ENST00000453927 274 ntBASIC5.47□□□□□ -1.53
SHROOM3Q8TF72 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.47□□□□□ -1.53
SHROOM3Q8TF72 RN7SL346P-201ENST00000491561 294 ntBASIC5.47□□□□□ -1.53
SHROOM3Q8TF72 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SHROOM3Q8TF72 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.47□□□□□ -1.53
SHROOM3Q8TF72 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.47□□□□□ -1.53
SHROOM3Q8TF72 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.47□□□□□ -1.53
SHROOM3Q8TF72 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.47□□□□□ -1.53
SHROOM3Q8TF72 OR1F2P-201ENST00000570470 933 ntBASIC5.47□□□□□ -1.53
SHROOM3Q8TF72 AC133644.2-201ENST00000608142 540 ntBASIC5.47□□□□□ -1.53
SHROOM3Q8TF72 AC007204.2-201ENST00000615022 616 ntBASIC5.47□□□□□ -1.53
SHROOM3Q8TF72 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.47□□□□□ -1.53
SHROOM3Q8TF72 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
SHROOM3Q8TF72 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SHROOM3Q8TF72 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SHROOM3Q8TF72 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SHROOM3Q8TF72 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SHROOM3Q8TF72 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.47□□□□□ -1.53
SHROOM3Q8TF72 RPS29P22-201ENST00000472363 168 ntBASIC5.47□□□□□ -1.53
SHROOM3Q8TF72 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
SHROOM3Q8TF72 MIR7853-201ENST00000584820 132 ntBASIC5.47□□□□□ -1.53
SHROOM3Q8TF72 AC010435.1-201ENST00000623353 1177 ntBASIC5.47□□□□□ -1.53
SHROOM3Q8TF72 AP002799.1-201ENST00000623552 423 ntBASIC5.47□□□□□ -1.53
SHROOM3Q8TF72 AP002505.2-201ENST00000623585 696 ntBASIC5.47□□□□□ -1.53
SHROOM3Q8TF72 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SHROOM3Q8TF72 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SHROOM3Q8TF72 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
SHROOM3Q8TF72 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SHROOM3Q8TF72 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.53
SHROOM3Q8TF72 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.46□□□□□ -1.53
SHROOM3Q8TF72 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
SHROOM3Q8TF72 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
SHROOM3Q8TF72 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.53
SHROOM3Q8TF72 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.53
SHROOM3Q8TF72 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
SHROOM3Q8TF72 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.46□□□□□ -1.53
SHROOM3Q8TF72 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.46□□□□□ -1.53
SHROOM3Q8TF72 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
SHROOM3Q8TF72 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SHROOM3Q8TF72 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SHROOM3Q8TF72 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
SHROOM3Q8TF72 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.46□□□□□ -1.54
SHROOM3Q8TF72 RPS27AP6-201ENST00000427962 448 ntBASIC5.46□□□□□ -1.54
SHROOM3Q8TF72 OR52B5P-201ENST00000435337 951 ntBASIC5.46□□□□□ -1.54
SHROOM3Q8TF72 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.46□□□□□ -1.54
SHROOM3Q8TF72 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.46□□□□□ -1.54
SHROOM3Q8TF72 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.46□□□□□ -1.54
SHROOM3Q8TF72 AL356981.1-201ENST00000454879 684 ntBASIC5.46□□□□□ -1.54
SHROOM3Q8TF72 AC091153.1-201ENST00000466297 402 ntBASIC5.46□□□□□ -1.54
SHROOM3Q8TF72 RPL35AP19-201ENST00000469425 329 ntBASIC5.46□□□□□ -1.54
SHROOM3Q8TF72 AC128716.1-201ENST00000475129 166 ntBASIC5.46□□□□□ -1.54
SHROOM3Q8TF72 RPL7P41-201ENST00000485823 957 ntBASIC5.46□□□□□ -1.54
SHROOM3Q8TF72 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SHROOM3Q8TF72 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.46□□□□□ -1.54
SHROOM3Q8TF72 AC126915.2-201ENST00000610957 190 ntBASIC5.46□□□□□ -1.54
SHROOM3Q8TF72 AC090607.5-201ENST00000615692 224 ntBASIC5.46□□□□□ -1.54
SHROOM3Q8TF72 OR52B5P-202ENST00000641118 1110 ntBASIC5.46□□□□□ -1.54
SHROOM3Q8TF72 CASC19-264ENST00000641912 1184 ntBASIC5.46□□□□□ -1.54
SHROOM3Q8TF72 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
SHROOM3Q8TF72 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.46□□□□□ -1.54
SHROOM3Q8TF72 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.46□□□□□ -1.54
SHROOM3Q8TF72 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
SHROOM3Q8TF72 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SHROOM3Q8TF72 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.46□□□□□ -1.54
SHROOM3Q8TF72 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SHROOM3Q8TF72 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
SHROOM3Q8TF72 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
SHROOM3Q8TF72 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.46□□□□□ -1.54
SHROOM3Q8TF72 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
SHROOM3Q8TF72 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SHROOM3Q8TF72 OR9G4-201ENST00000302957 984 ntBASIC5.46□□□□□ -1.54
SHROOM3Q8TF72 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
SHROOM3Q8TF72 AL353625.1-202ENST00000366273 571 ntBASIC5.46□□□□□ -1.54
SHROOM3Q8TF72 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
SHROOM3Q8TF72 AL009179.1-201ENST00000406085 265 ntBASIC5.46□□□□□ -1.54
SHROOM3Q8TF72 RNF10P1-201ENST00000418589 369 ntBASIC5.46□□□□□ -1.54
SHROOM3Q8TF72 RPS26P13-201ENST00000419030 330 ntBASIC5.46□□□□□ -1.54
SHROOM3Q8TF72 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.46□□□□□ -1.54
SHROOM3Q8TF72 EI24P4-201ENST00000423683 1078 ntBASIC5.46□□□□□ -1.54
SHROOM3Q8TF72 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.46□□□□□ -1.54
SHROOM3Q8TF72 GSTM5P1-201ENST00000434751 660 ntBASIC5.46□□□□□ -1.54
SHROOM3Q8TF72 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.46□□□□□ -1.54
SHROOM3Q8TF72 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.46□□□□□ -1.54
SHROOM3Q8TF72 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.46□□□□□ -1.54
SHROOM3Q8TF72 RNA5SP373-201ENST00000517271 95 ntBASIC5.46□□□□□ -1.54
SHROOM3Q8TF72 AC134698.5-201ENST00000519444 336 ntBASIC5.46□□□□□ -1.54
SHROOM3Q8TF72 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.46□□□□□ -1.54
SHROOM3Q8TF72 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.46□□□□□ -1.54
SHROOM3Q8TF72 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.46□□□□□ -1.54
SHROOM3Q8TF72 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
SHROOM3Q8TF72 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.45□□□□□ -1.54
SHROOM3Q8TF72 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.45□□□□□ -1.54
SHROOM3Q8TF72 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SHROOM3Q8TF72 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SHROOM3Q8TF72 AC005005.4-201ENST00000623789 16698 ntBASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms