Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC6.41□□□□□ -1.38
SNED1Q8TER0 AC093414.1-201ENST00000434712 514 ntBASIC6.41□□□□□ -1.38
SNED1Q8TER0 RPL5P25-201ENST00000441148 775 ntBASIC6.41□□□□□ -1.38
SNED1Q8TER0 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC6.41□□□□□ -1.38
SNED1Q8TER0 HMGN2P25-201ENST00000486956 268 ntBASIC6.41□□□□□ -1.38
SNED1Q8TER0 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC6.41□□□□□ -1.38
SNED1Q8TER0 BGLT3-201ENST00000564523 994 ntBASIC6.41□□□□□ -1.38
SNED1Q8TER0 AP001267.4-201ENST00000602598 545 ntBASIC6.41□□□□□ -1.38
SNED1Q8TER0 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.41□□□□□ -1.38
SNED1Q8TER0 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SNED1Q8TER0 AC073365.1-203ENST00000641055 1992 ntBASIC6.41□□□□□ -1.38
SNED1Q8TER0 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.4□□□□□ -1.38
SNED1Q8TER0 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SNED1Q8TER0 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.4□□□□□ -1.38
SNED1Q8TER0 CDY3P-201ENST00000454543 1618 ntBASIC6.4□□□□□ -1.38
SNED1Q8TER0 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
SNED1Q8TER0 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC6.4□□□□□ -1.38
SNED1Q8TER0 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC6.4□□□□□ -1.38
SNED1Q8TER0 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SNED1Q8TER0 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
SNED1Q8TER0 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
SNED1Q8TER0 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC6.4□□□□□ -1.39
SNED1Q8TER0 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
SNED1Q8TER0 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC6.4□□□□□ -1.39
SNED1Q8TER0 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC6.4□□□□□ -1.39
SNED1Q8TER0 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
SNED1Q8TER0 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC6.4□□□□□ -1.39
SNED1Q8TER0 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
SNED1Q8TER0 AC091912.1-201ENST00000511351 248 ntBASIC6.4□□□□□ -1.39
SNED1Q8TER0 AP006289.1-201ENST00000538089 277 ntBASIC6.4□□□□□ -1.39
SNED1Q8TER0 AL512310.9-201ENST00000553311 948 ntBASIC6.4□□□□□ -1.39
SNED1Q8TER0 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC6.4□□□□□ -1.39
SNED1Q8TER0 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC6.4□□□□□ -1.39
SNED1Q8TER0 AC099654.11-201ENST00000638857 294 ntBASIC6.4□□□□□ -1.39
SNED1Q8TER0 AC073869.8-201ENST00000641806 335 ntBASIC6.4□□□□□ -1.39
SNED1Q8TER0 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
SNED1Q8TER0 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
SNED1Q8TER0 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC6.39□□□□□ -1.39
SNED1Q8TER0 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SNED1Q8TER0 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SNED1Q8TER0 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SNED1Q8TER0 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SNED1Q8TER0 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC6.39□□□□□ -1.39
SNED1Q8TER0 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SNED1Q8TER0 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SNED1Q8TER0 RN7SKP100-201ENST00000411258 284 ntBASIC6.39□□□□□ -1.39
SNED1Q8TER0 C4BPAP2-201ENST00000428434 478 ntBASIC6.39□□□□□ -1.39
SNED1Q8TER0 LINC02210-201ENST00000444561 288 ntBASIC6.39□□□□□ -1.39
SNED1Q8TER0 IGBP1P3-201ENST00000447449 1000 ntBASIC6.39□□□□□ -1.39
SNED1Q8TER0 CYCSP42-201ENST00000450823 238 ntBASIC6.39□□□□□ -1.39
SNED1Q8TER0 AC140172.1-201ENST00000502928 141 ntBASIC6.39□□□□□ -1.39
SNED1Q8TER0 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
SNED1Q8TER0 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SNED1Q8TER0 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC6.39□□□□□ -1.39
SNED1Q8TER0 AC005252.1-201ENST00000604518 1063 ntBASIC6.39□□□□□ -1.39
SNED1Q8TER0 AC016745.2-201ENST00000608834 3443 ntBASIC6.39□□□□□ -1.39
SNED1Q8TER0 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.39□□□□□ -1.39
SNED1Q8TER0 AC015712.7-201ENST00000615211 635 ntBASIC6.39□□□□□ -1.39
SNED1Q8TER0 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC6.39□□□□□ -1.39
SNED1Q8TER0 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC6.39□□□□□ -1.39
SNED1Q8TER0 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
SNED1Q8TER0 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.38□□□□□ -1.39
SNED1Q8TER0 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.38□□□□□ -1.39
SNED1Q8TER0 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SNED1Q8TER0 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
SNED1Q8TER0 MAPK10-270ENST00000641102 3538 ntBASIC6.38□□□□□ -1.39
SNED1Q8TER0 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SNED1Q8TER0 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SNED1Q8TER0 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SNED1Q8TER0 ATP5A1P1-201ENST00000454088 1321 ntBASIC6.38□□□□□ -1.39
SNED1Q8TER0 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SNED1Q8TER0 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
SNED1Q8TER0 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
SNED1Q8TER0 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
SNED1Q8TER0 RNA5SP113-201ENST00000410486 84 ntBASIC6.38□□□□□ -1.39
SNED1Q8TER0 AL359265.2-201ENST00000434367 631 ntBASIC6.38□□□□□ -1.39
SNED1Q8TER0 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC6.38□□□□□ -1.39
SNED1Q8TER0 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC6.38□□□□□ -1.39
SNED1Q8TER0 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.38□□□□□ -1.39
SNED1Q8TER0 AC063943.1-201ENST00000465434 453 ntBASIC6.38□□□□□ -1.39
SNED1Q8TER0 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC6.38□□□□□ -1.39
SNED1Q8TER0 COX6B1P5-201ENST00000509843 249 ntBASIC6.38□□□□□ -1.39
SNED1Q8TER0 SCARNA20.4-201ENST00000516969 131 ntBASIC6.38□□□□□ -1.39
SNED1Q8TER0 IGKV1-32-201ENST00000519290 311 ntBASIC6.38□□□□□ -1.39
SNED1Q8TER0 OR7E128P-201ENST00000532736 1024 ntBASIC6.38□□□□□ -1.39
SNED1Q8TER0 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SNED1Q8TER0 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC6.38□□□□□ -1.39
SNED1Q8TER0 AL391358.1-201ENST00000605342 190 ntBASIC6.38□□□□□ -1.39
SNED1Q8TER0 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.38□□□□□ -1.39
SNED1Q8TER0 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC6.38□□□□□ -1.39
SNED1Q8TER0 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SNED1Q8TER0 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SNED1Q8TER0 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SNED1Q8TER0 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SNED1Q8TER0 AC100757.1-201ENST00000616872 1835 ntBASIC6.38□□□□□ -1.39
SNED1Q8TER0 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC6.38□□□□□ -1.39
SNED1Q8TER0 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SNED1Q8TER0 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
SNED1Q8TER0 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.37□□□□□ -1.39
SNED1Q8TER0 AC144833.1-201ENST00000567953 4089 ntBASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms