Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC6.9□□□□□ -1.3
SYNE4Q8N205 OR51K1P-201ENST00000510214 950 ntBASIC6.9□□□□□ -1.3
SYNE4Q8N205 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC6.9□□□□□ -1.3
SYNE4Q8N205 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC6.9□□□□□ -1.3
SYNE4Q8N205 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.9□□□□□ -1.3
SYNE4Q8N205 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC6.9□□□□□ -1.3
SYNE4Q8N205 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
SYNE4Q8N205 AC040174.2-201ENST00000602701 465 ntBASIC6.9□□□□□ -1.3
SYNE4Q8N205 AL133481.2-203ENST00000607558 139 ntBASIC6.9□□□□□ -1.3
SYNE4Q8N205 OR4G3P-201ENST00000633500 913 ntBASIC6.9□□□□□ -1.3
SYNE4Q8N205 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC6.9□□□□□ -1.3
SYNE4Q8N205 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
SYNE4Q8N205 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
SYNE4Q8N205 AL021877.2-201ENST00000624442 10684 ntBASIC6.9□□□□□ -1.31
SYNE4Q8N205 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
SYNE4Q8N205 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
SYNE4Q8N205 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.9□□□□□ -1.31
SYNE4Q8N205 ZNF101P1-201ENST00000435701 1720 ntBASIC6.9□□□□□ -1.31
SYNE4Q8N205 AC144833.1-201ENST00000567953 4089 ntBASIC6.9□□□□□ -1.31
SYNE4Q8N205 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
SYNE4Q8N205 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
SYNE4Q8N205 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
SYNE4Q8N205 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
SYNE4Q8N205 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SYNE4Q8N205 RNU1-43P-201ENST00000365052 165 ntBASIC6.89□□□□□ -1.31
SYNE4Q8N205 MIR551A-201ENST00000385042 96 ntBASIC6.89□□□□□ -1.31
SYNE4Q8N205 MT-RNR1-201ENST00000389680 954 ntBASIC6.89□□□□□ -1.31
SYNE4Q8N205 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
SYNE4Q8N205 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC6.89□□□□□ -1.31
SYNE4Q8N205 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC6.89□□□□□ -1.31
SYNE4Q8N205 DSTNP5-201ENST00000427921 523 ntBASIC6.89□□□□□ -1.31
SYNE4Q8N205 ZFAND6P1-201ENST00000434138 605 ntBASIC6.89□□□□□ -1.31
SYNE4Q8N205 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC6.89□□□□□ -1.31
SYNE4Q8N205 AL672167.3-201ENST00000465951 960 ntBASIC6.89□□□□□ -1.31
SYNE4Q8N205 AC093801.2-201ENST00000503966 1050 ntBASIC6.89□□□□□ -1.31
SYNE4Q8N205 SNRPCP2-201ENST00000504370 475 ntBASIC6.89□□□□□ -1.31
SYNE4Q8N205 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC6.89□□□□□ -1.31
SYNE4Q8N205 snoU109.5-201ENST00000516231 132 ntBASIC6.89□□□□□ -1.31
SYNE4Q8N205 IGHVIII-76-1-201ENST00000523776 286 ntBASIC6.89□□□□□ -1.31
SYNE4Q8N205 AP003049.1-201ENST00000529418 457 ntBASIC6.89□□□□□ -1.31
SYNE4Q8N205 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SYNE4Q8N205 AC137627.1-201ENST00000545761 289 ntBASIC6.89□□□□□ -1.31
SYNE4Q8N205 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC6.89□□□□□ -1.31
SYNE4Q8N205 RPL10P14-201ENST00000565265 298 ntBASIC6.89□□□□□ -1.31
SYNE4Q8N205 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC6.89□□□□□ -1.31
SYNE4Q8N205 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC6.89□□□□□ -1.31
SYNE4Q8N205 AC006116.3-201ENST00000592968 361 ntBASIC6.89□□□□□ -1.31
SYNE4Q8N205 VN1R87P-201ENST00000596706 487 ntBASIC6.89□□□□□ -1.31
SYNE4Q8N205 AL713998.2-201ENST00000604538 1198 ntBASIC6.89□□□□□ -1.31
SYNE4Q8N205 HIRAP1-201ENST00000605318 787 ntBASIC6.89□□□□□ -1.31
SYNE4Q8N205 AC009163.6-201ENST00000612367 342 ntBASIC6.89□□□□□ -1.31
SYNE4Q8N205 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC6.89□□□□□ -1.31
SYNE4Q8N205 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC6.89□□□□□ -1.31
SYNE4Q8N205 AL445528.2-201ENST00000620582 470 ntBASIC6.89□□□□□ -1.31
SYNE4Q8N205 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
SYNE4Q8N205 AC068446.1-201ENST00000556425 1549 ntBASIC6.89□□□□□ -1.31
SYNE4Q8N205 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
SYNE4Q8N205 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
SYNE4Q8N205 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.89□□□□□ -1.31
SYNE4Q8N205 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
SYNE4Q8N205 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.89□□□□□ -1.31
SYNE4Q8N205 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.89□□□□□ -1.31
SYNE4Q8N205 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
SYNE4Q8N205 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SYNE4Q8N205 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
SYNE4Q8N205 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SYNE4Q8N205 MTCO1P22-201ENST00000604619 1360 ntBASIC6.88□□□□□ -1.31
SYNE4Q8N205 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
SYNE4Q8N205 SNORD1C-201ENST00000363315 78 ntBASIC6.88□□□□□ -1.31
SYNE4Q8N205 MIR141-201ENST00000384975 95 ntBASIC6.88□□□□□ -1.31
SYNE4Q8N205 AF228730.1-201ENST00000397972 663 ntBASIC6.88□□□□□ -1.31
SYNE4Q8N205 OR13Z1P-201ENST00000416141 834 ntBASIC6.88□□□□□ -1.31
SYNE4Q8N205 MTCO2P1-201ENST00000424648 477 ntBASIC6.88□□□□□ -1.31
SYNE4Q8N205 AC108075.1-201ENST00000424692 529 ntBASIC6.88□□□□□ -1.31
SYNE4Q8N205 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.88□□□□□ -1.31
SYNE4Q8N205 AL606490.8-201ENST00000441624 319 ntBASIC6.88□□□□□ -1.31
SYNE4Q8N205 LARP7P4-201ENST00000481075 878 ntBASIC6.88□□□□□ -1.31
SYNE4Q8N205 AC105233.1-201ENST00000498840 781 ntBASIC6.88□□□□□ -1.31
SYNE4Q8N205 C1GALT1P2-201ENST00000510813 1104 ntBASIC6.88□□□□□ -1.31
SYNE4Q8N205 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC6.88□□□□□ -1.31
SYNE4Q8N205 AC027667.1-201ENST00000545814 304 ntBASIC6.88□□□□□ -1.31
SYNE4Q8N205 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC6.88□□□□□ -1.31
SYNE4Q8N205 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC6.88□□□□□ -1.31
SYNE4Q8N205 IGLCOR22-2-201ENST00000605398 313 ntBASIC6.88□□□□□ -1.31
SYNE4Q8N205 WBP1LP8-201ENST00000617401 327 ntBASIC6.88□□□□□ -1.31
SYNE4Q8N205 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC6.88□□□□□ -1.31
SYNE4Q8N205 AL356863.1-201ENST00000623378 1080 ntBASIC6.88□□□□□ -1.31
SYNE4Q8N205 AP002799.1-201ENST00000623552 423 ntBASIC6.88□□□□□ -1.31
SYNE4Q8N205 AC010872.1-201ENST00000624225 675 ntBASIC6.88□□□□□ -1.31
SYNE4Q8N205 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
SYNE4Q8N205 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
SYNE4Q8N205 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
SYNE4Q8N205 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SYNE4Q8N205 AC018765.1-201ENST00000623357 3446 ntBASIC6.88□□□□□ -1.31
SYNE4Q8N205 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SYNE4Q8N205 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SYNE4Q8N205 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SYNE4Q8N205 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC6.87□□□□□ -1.31
SYNE4Q8N205 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SYNE4Q8N205 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms