Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 AC024558.1-201ENST00000505008 528 ntBASIC5.63□□□□□ -1.51
RFWD3Q6PCD5 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.63□□□□□ -1.51
RFWD3Q6PCD5 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.63□□□□□ -1.51
RFWD3Q6PCD5 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.63□□□□□ -1.51
RFWD3Q6PCD5 SCARNA16.4-201ENST00000516956 187 ntBASIC5.63□□□□□ -1.51
RFWD3Q6PCD5 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.63□□□□□ -1.51
RFWD3Q6PCD5 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.63□□□□□ -1.51
RFWD3Q6PCD5 EIF4EP5-201ENST00000528228 640 ntBASIC5.63□□□□□ -1.51
RFWD3Q6PCD5 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.63□□□□□ -1.51
RFWD3Q6PCD5 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.63□□□□□ -1.51
RFWD3Q6PCD5 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.63□□□□□ -1.51
RFWD3Q6PCD5 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.63□□□□□ -1.51
RFWD3Q6PCD5 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.63□□□□□ -1.51
RFWD3Q6PCD5 SUMO2P15-201ENST00000604285 278 ntBASIC5.63□□□□□ -1.51
RFWD3Q6PCD5 MIR6837-201ENST00000620884 64 ntBASIC5.63□□□□□ -1.51
RFWD3Q6PCD5 AC138965.3-201ENST00000623875 498 ntBASIC5.63□□□□□ -1.51
RFWD3Q6PCD5 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.63□□□□□ -1.51
RFWD3Q6PCD5 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.63□□□□□ -1.51
RFWD3Q6PCD5 SAMMSON-209ENST00000641222 1100 ntBASIC5.63□□□□□ -1.51
RFWD3Q6PCD5 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RFWD3Q6PCD5 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.63□□□□□ -1.51
RFWD3Q6PCD5 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
RFWD3Q6PCD5 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RFWD3Q6PCD5 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RFWD3Q6PCD5 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RFWD3Q6PCD5 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.62□□□□□ -1.51
RFWD3Q6PCD5 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.62□□□□□ -1.51
RFWD3Q6PCD5 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
RFWD3Q6PCD5 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.62□□□□□ -1.51
RFWD3Q6PCD5 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
RFWD3Q6PCD5 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RFWD3Q6PCD5 OR9K1P-201ENST00000326513 941 ntBASIC5.62□□□□□ -1.51
RFWD3Q6PCD5 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5.62□□□□□ -1.51
RFWD3Q6PCD5 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.62□□□□□ -1.51
RFWD3Q6PCD5 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.62□□□□□ -1.51
RFWD3Q6PCD5 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.62□□□□□ -1.51
RFWD3Q6PCD5 RIMKLBP2-201ENST00000424737 654 ntBASIC5.62□□□□□ -1.51
RFWD3Q6PCD5 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.62□□□□□ -1.51
RFWD3Q6PCD5 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.62□□□□□ -1.51
RFWD3Q6PCD5 AL359265.1-201ENST00000440296 795 ntBASIC5.62□□□□□ -1.51
RFWD3Q6PCD5 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.62□□□□□ -1.51
RFWD3Q6PCD5 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.62□□□□□ -1.51
RFWD3Q6PCD5 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.62□□□□□ -1.51
RFWD3Q6PCD5 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC5.62□□□□□ -1.51
RFWD3Q6PCD5 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.62□□□□□ -1.51
RFWD3Q6PCD5 PGAM1P13-201ENST00000507497 754 ntBASIC5.62□□□□□ -1.51
RFWD3Q6PCD5 ASNSP4-201ENST00000511103 447 ntBASIC5.62□□□□□ -1.51
RFWD3Q6PCD5 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.62□□□□□ -1.51
RFWD3Q6PCD5 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.62□□□□□ -1.51
RFWD3Q6PCD5 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.62□□□□□ -1.51
RFWD3Q6PCD5 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.62□□□□□ -1.51
RFWD3Q6PCD5 AP004607.2-201ENST00000533949 322 ntBASIC5.62□□□□□ -1.51
RFWD3Q6PCD5 LSM3P2-201ENST00000551246 273 ntBASIC5.62□□□□□ -1.51
RFWD3Q6PCD5 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.62□□□□□ -1.51
RFWD3Q6PCD5 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC5.62□□□□□ -1.51
RFWD3Q6PCD5 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.62□□□□□ -1.51
RFWD3Q6PCD5 AC106730.2-201ENST00000566641 540 ntBASIC5.62□□□□□ -1.51
RFWD3Q6PCD5 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RFWD3Q6PCD5 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.62□□□□□ -1.51
RFWD3Q6PCD5 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.62□□□□□ -1.51
RFWD3Q6PCD5 AC010809.3-201ENST00000621310 641 ntBASIC5.62□□□□□ -1.51
RFWD3Q6PCD5 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.62□□□□□ -1.51
RFWD3Q6PCD5 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
RFWD3Q6PCD5 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
RFWD3Q6PCD5 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RFWD3Q6PCD5 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
RFWD3Q6PCD5 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RFWD3Q6PCD5 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RFWD3Q6PCD5 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.62□□□□□ -1.51
RFWD3Q6PCD5 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RFWD3Q6PCD5 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.61□□□□□ -1.51
RFWD3Q6PCD5 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
RFWD3Q6PCD5 ABCC13-202ENST00000463099 3842 ntBASIC5.61□□□□□ -1.51
RFWD3Q6PCD5 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.61□□□□□ -1.51
RFWD3Q6PCD5 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RFWD3Q6PCD5 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RFWD3Q6PCD5 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RFWD3Q6PCD5 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
RFWD3Q6PCD5 MIR1286-201ENST00000408112 78 ntBASIC5.61□□□□□ -1.51
RFWD3Q6PCD5 RN7SKP278-201ENST00000410504 342 ntBASIC5.61□□□□□ -1.51
RFWD3Q6PCD5 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC5.61□□□□□ -1.51
RFWD3Q6PCD5 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC5.61□□□□□ -1.51
RFWD3Q6PCD5 DSTNP5-201ENST00000427921 523 ntBASIC5.61□□□□□ -1.51
RFWD3Q6PCD5 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.61□□□□□ -1.51
RFWD3Q6PCD5 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.61□□□□□ -1.51
RFWD3Q6PCD5 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RFWD3Q6PCD5 RNA5SP34-201ENST00000516887 130 ntBASIC5.61□□□□□ -1.51
RFWD3Q6PCD5 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.61□□□□□ -1.51
RFWD3Q6PCD5 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RFWD3Q6PCD5 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.61□□□□□ -1.51
RFWD3Q6PCD5 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.61□□□□□ -1.51
RFWD3Q6PCD5 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.61□□□□□ -1.51
RFWD3Q6PCD5 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
RFWD3Q6PCD5 AC109583.2-201ENST00000617367 129 ntBASIC5.61□□□□□ -1.51
RFWD3Q6PCD5 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
RFWD3Q6PCD5 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RFWD3Q6PCD5 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.61□□□□□ -1.51
RFWD3Q6PCD5 AC004808.2-201ENST00000627965 773 ntBASIC5.61□□□□□ -1.51
RFWD3Q6PCD5 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.61□□□□□ -1.51
RFWD3Q6PCD5 FRG1EP-201ENST00000634469 770 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms