Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.6
H3F3CQ6NXT2 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
H3F3CQ6NXT2 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.08□□□□□ -1.6
H3F3CQ6NXT2 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.08□□□□□ -1.6
H3F3CQ6NXT2 AC009962.1-201ENST00000567327 3813 ntBASIC5.08□□□□□ -1.6
H3F3CQ6NXT2 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
H3F3CQ6NXT2 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
H3F3CQ6NXT2 OR4F13P-202ENST00000560066 2054 ntBASIC5.08□□□□□ -1.6
H3F3CQ6NXT2 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.08□□□□□ -1.6
H3F3CQ6NXT2 U3.10-201ENST00000364459 214 ntBASIC5.08□□□□□ -1.6
H3F3CQ6NXT2 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
H3F3CQ6NXT2 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
H3F3CQ6NXT2 RNU4-34P-201ENST00000410431 124 ntBASIC5.08□□□□□ -1.6
H3F3CQ6NXT2 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.08□□□□□ -1.6
H3F3CQ6NXT2 METTL15P3-201ENST00000415522 1221 ntBASIC5.08□□□□□ -1.6
H3F3CQ6NXT2 HMGN2P27-201ENST00000427352 270 ntBASIC5.08□□□□□ -1.6
H3F3CQ6NXT2 DSTNP5-201ENST00000427921 523 ntBASIC5.08□□□□□ -1.6
H3F3CQ6NXT2 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.08□□□□□ -1.6
H3F3CQ6NXT2 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.08□□□□□ -1.6
H3F3CQ6NXT2 CYCSP6-201ENST00000434498 302 ntBASIC5.08□□□□□ -1.6
H3F3CQ6NXT2 AC099670.2-201ENST00000435130 321 ntBASIC5.08□□□□□ -1.6
H3F3CQ6NXT2 MTND2P40-201ENST00000436718 841 ntBASIC5.08□□□□□ -1.6
H3F3CQ6NXT2 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.08□□□□□ -1.6
H3F3CQ6NXT2 CNOT7P2-201ENST00000441051 832 ntBASIC5.08□□□□□ -1.6
H3F3CQ6NXT2 RN7SL172P-201ENST00000460535 303 ntBASIC5.08□□□□□ -1.6
H3F3CQ6NXT2 RN7SL447P-201ENST00000494711 245 ntBASIC5.08□□□□□ -1.6
H3F3CQ6NXT2 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.08□□□□□ -1.6
H3F3CQ6NXT2 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
H3F3CQ6NXT2 AC093763.2-201ENST00000505334 1223 ntBASIC5.08□□□□□ -1.6
H3F3CQ6NXT2 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.08□□□□□ -1.6
H3F3CQ6NXT2 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
H3F3CQ6NXT2 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.08□□□□□ -1.6
H3F3CQ6NXT2 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.08□□□□□ -1.6
H3F3CQ6NXT2 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.08□□□□□ -1.6
H3F3CQ6NXT2 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.08□□□□□ -1.6
H3F3CQ6NXT2 AL356752.1-201ENST00000615844 593 ntBASIC5.08□□□□□ -1.6
H3F3CQ6NXT2 AC016769.4-201ENST00000616893 535 ntBASIC5.08□□□□□ -1.6
H3F3CQ6NXT2 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.08□□□□□ -1.6
H3F3CQ6NXT2 MIR6719-201ENST00000622428 87 ntBASIC5.08□□□□□ -1.6
H3F3CQ6NXT2 AC079776.5-201ENST00000641920 211 ntBASIC5.08□□□□□ -1.6
H3F3CQ6NXT2 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.08□□□□□ -1.6
H3F3CQ6NXT2 AC006484.1-201ENST00000435086 1884 ntBASIC5.08□□□□□ -1.6
H3F3CQ6NXT2 AL513548.1-201ENST00000562904 1724 ntBASIC5.08□□□□□ -1.6
H3F3CQ6NXT2 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.08□□□□□ -1.6
H3F3CQ6NXT2 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.08□□□□□ -1.6
H3F3CQ6NXT2 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
H3F3CQ6NXT2 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.08□□□□□ -1.6
H3F3CQ6NXT2 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
H3F3CQ6NXT2 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
H3F3CQ6NXT2 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC5.07□□□□□ -1.6
H3F3CQ6NXT2 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.07□□□□□ -1.6
H3F3CQ6NXT2 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
H3F3CQ6NXT2 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
H3F3CQ6NXT2 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.07□□□□□ -1.6
H3F3CQ6NXT2 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
H3F3CQ6NXT2 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
H3F3CQ6NXT2 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
H3F3CQ6NXT2 AC005294.1-201ENST00000355509 281 ntBASIC5.07□□□□□ -1.6
H3F3CQ6NXT2 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
H3F3CQ6NXT2 MIR223-201ENST00000385204 110 ntBASIC5.07□□□□□ -1.6
H3F3CQ6NXT2 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
H3F3CQ6NXT2 RNU1-77P-201ENST00000390868 162 ntBASIC5.07□□□□□ -1.6
H3F3CQ6NXT2 RNA5SP339-201ENST00000390987 122 ntBASIC5.07□□□□□ -1.6
H3F3CQ6NXT2 AL133325.1-201ENST00000421090 382 ntBASIC5.07□□□□□ -1.6
H3F3CQ6NXT2 OR10T1P-201ENST00000424327 947 ntBASIC5.07□□□□□ -1.6
H3F3CQ6NXT2 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
H3F3CQ6NXT2 RIMKLBP2-201ENST00000424737 654 ntBASIC5.07□□□□□ -1.6
H3F3CQ6NXT2 OR52B5P-201ENST00000435337 951 ntBASIC5.07□□□□□ -1.6
H3F3CQ6NXT2 RPS17P5-201ENST00000498293 408 ntBASIC5.07□□□□□ -1.6
H3F3CQ6NXT2 AC006499.3-201ENST00000506077 748 ntBASIC5.07□□□□□ -1.6
H3F3CQ6NXT2 HMGB1P44-201ENST00000508597 572 ntBASIC5.07□□□□□ -1.6
H3F3CQ6NXT2 AC111000.6-201ENST00000514471 709 ntBASIC5.07□□□□□ -1.6
H3F3CQ6NXT2 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.07□□□□□ -1.6
H3F3CQ6NXT2 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.07□□□□□ -1.6
H3F3CQ6NXT2 AC004825.1-201ENST00000555068 586 ntBASIC5.07□□□□□ -1.6
H3F3CQ6NXT2 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.07□□□□□ -1.6
H3F3CQ6NXT2 AC060766.1-201ENST00000590824 627 ntBASIC5.07□□□□□ -1.6
H3F3CQ6NXT2 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
H3F3CQ6NXT2 AC021766.1-201ENST00000624404 741 ntBASIC5.07□□□□□ -1.6
H3F3CQ6NXT2 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.07□□□□□ -1.6
H3F3CQ6NXT2 OR52B5P-202ENST00000641118 1110 ntBASIC5.07□□□□□ -1.6
H3F3CQ6NXT2 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
H3F3CQ6NXT2 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
H3F3CQ6NXT2 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
H3F3CQ6NXT2 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
H3F3CQ6NXT2 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
H3F3CQ6NXT2 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.07□□□□□ -1.6
H3F3CQ6NXT2 AC020656.2-201ENST00000613291 5309 ntBASIC5.07□□□□□ -1.6
H3F3CQ6NXT2 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
H3F3CQ6NXT2 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
H3F3CQ6NXT2 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
H3F3CQ6NXT2 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
H3F3CQ6NXT2 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
H3F3CQ6NXT2 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
H3F3CQ6NXT2 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.06□□□□□ -1.6
H3F3CQ6NXT2 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.06□□□□□ -1.6
H3F3CQ6NXT2 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
H3F3CQ6NXT2 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.06□□□□□ -1.6
H3F3CQ6NXT2 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
H3F3CQ6NXT2 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms