Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC7.76□□□□□ -1.17
CDC42BPAQ5VT25 AC092570.3-201ENST00000420113 693 ntBASIC7.76□□□□□ -1.17
CDC42BPAQ5VT25 HSPD1P12-201ENST00000429127 1069 ntBASIC7.76□□□□□ -1.17
CDC42BPAQ5VT25 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC7.76□□□□□ -1.17
CDC42BPAQ5VT25 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC7.76□□□□□ -1.17
CDC42BPAQ5VT25 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC7.76□□□□□ -1.17
CDC42BPAQ5VT25 AC104687.2-201ENST00000604442 342 ntBASIC7.76□□□□□ -1.17
CDC42BPAQ5VT25 SSX9-202ENST00000608568 580 ntTSL 4 BASIC7.76□□□□□ -1.17
CDC42BPAQ5VT25 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC7.76□□□□□ -1.17
CDC42BPAQ5VT25 USP8-204ENST00000425032 3559 ntTSL 2 BASIC7.76□□□□□ -1.17
CDC42BPAQ5VT25 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
CDC42BPAQ5VT25 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC7.76□□□□□ -1.17
CDC42BPAQ5VT25 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
CDC42BPAQ5VT25 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CDC42BPAQ5VT25 AC010928.1-201ENST00000592477 1447 ntBASIC7.76□□□□□ -1.17
CDC42BPAQ5VT25 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CDC42BPAQ5VT25 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC7.76□□□□□ -1.17
CDC42BPAQ5VT25 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CDC42BPAQ5VT25 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CDC42BPAQ5VT25 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC7.76□□□□□ -1.17
CDC42BPAQ5VT25 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CDC42BPAQ5VT25 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC7.75□□□□□ -1.17
CDC42BPAQ5VT25 GLULP6-201ENST00000399502 913 ntBASIC7.75□□□□□ -1.17
CDC42BPAQ5VT25 PRPF38AP2-201ENST00000438179 851 ntBASIC7.75□□□□□ -1.17
CDC42BPAQ5VT25 OR52J1P-201ENST00000450596 932 ntBASIC7.75□□□□□ -1.17
CDC42BPAQ5VT25 RPS17P2-201ENST00000461663 408 ntBASIC7.75□□□□□ -1.17
CDC42BPAQ5VT25 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC7.75□□□□□ -1.17
CDC42BPAQ5VT25 AP006289.1-201ENST00000538089 277 ntBASIC7.75□□□□□ -1.17
CDC42BPAQ5VT25 AC010632.3-201ENST00000611377 369 ntBASIC7.75□□□□□ -1.17
CDC42BPAQ5VT25 MIR6133-201ENST00000617057 108 ntBASIC7.75□□□□□ -1.17
CDC42BPAQ5VT25 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC7.75□□□□□ -1.17
CDC42BPAQ5VT25 AC135068.12-201ENST00000637370 931 ntBASIC7.75□□□□□ -1.17
CDC42BPAQ5VT25 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
CDC42BPAQ5VT25 ZNF652P1-201ENST00000442420 1309 ntBASIC7.75□□□□□ -1.17
CDC42BPAQ5VT25 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC7.75□□□□□ -1.17
CDC42BPAQ5VT25 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CDC42BPAQ5VT25 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
CDC42BPAQ5VT25 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
CDC42BPAQ5VT25 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
CDC42BPAQ5VT25 U3.30-201ENST00000391308 210 ntBASIC7.75□□□□□ -1.17
CDC42BPAQ5VT25 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CDC42BPAQ5VT25 AL359265.2-201ENST00000434367 631 ntBASIC7.75□□□□□ -1.17
CDC42BPAQ5VT25 RPS29P9-201ENST00000440360 171 ntBASIC7.75□□□□□ -1.17
CDC42BPAQ5VT25 AC093267.1-201ENST00000489176 961 ntBASIC7.75□□□□□ -1.17
CDC42BPAQ5VT25 EIF1P5-201ENST00000585002 234 ntBASIC7.75□□□□□ -1.17
CDC42BPAQ5VT25 MIR6839-201ENST00000620425 113 ntBASIC7.75□□□□□ -1.17
CDC42BPAQ5VT25 AC010435.1-201ENST00000623353 1177 ntBASIC7.75□□□□□ -1.17
CDC42BPAQ5VT25 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CDC42BPAQ5VT25 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
CDC42BPAQ5VT25 PPP1R12B-216ENST00000608999 15248 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CDC42BPAQ5VT25 SAMMSON-226ENST00000642089 1582 ntBASIC7.74□□□□□ -1.17
CDC42BPAQ5VT25 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC7.74□□□□□ -1.17
CDC42BPAQ5VT25 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CDC42BPAQ5VT25 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
CDC42BPAQ5VT25 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC7.74□□□□□ -1.17
CDC42BPAQ5VT25 MTHFD2P5-201ENST00000320415 844 ntBASIC7.74□□□□□ -1.17
CDC42BPAQ5VT25 SNORA2.3-201ENST00000383920 135 ntBASIC7.74□□□□□ -1.17
CDC42BPAQ5VT25 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC7.74□□□□□ -1.17
CDC42BPAQ5VT25 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC7.74□□□□□ -1.17
CDC42BPAQ5VT25 RN7SL354P-201ENST00000469282 294 ntBASIC7.74□□□□□ -1.17
CDC42BPAQ5VT25 AC020779.1-201ENST00000478757 796 ntBASIC7.74□□□□□ -1.17
CDC42BPAQ5VT25 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC7.74□□□□□ -1.17
CDC42BPAQ5VT25 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC7.74□□□□□ -1.17
CDC42BPAQ5VT25 AP001267.4-201ENST00000602598 545 ntBASIC7.74□□□□□ -1.17
CDC42BPAQ5VT25 AL023583.1-201ENST00000607518 1143 ntBASIC7.74□□□□□ -1.17
CDC42BPAQ5VT25 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC7.74□□□□□ -1.17
CDC42BPAQ5VT25 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CDC42BPAQ5VT25 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
CDC42BPAQ5VT25 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC7.74□□□□□ -1.17
CDC42BPAQ5VT25 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CDC42BPAQ5VT25 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC7.74□□□□□ -1.17
CDC42BPAQ5VT25 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CDC42BPAQ5VT25 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CDC42BPAQ5VT25 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CDC42BPAQ5VT25 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
CDC42BPAQ5VT25 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CDC42BPAQ5VT25 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC7.73□□□□□ -1.17
CDC42BPAQ5VT25 C4BPAP2-201ENST00000428434 478 ntBASIC7.73□□□□□ -1.17
CDC42BPAQ5VT25 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CDC42BPAQ5VT25 VDAC1P6-201ENST00000430062 855 ntBASIC7.73□□□□□ -1.17
CDC42BPAQ5VT25 AC010733.1-201ENST00000451515 401 ntBASIC7.73□□□□□ -1.17
CDC42BPAQ5VT25 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC7.73□□□□□ -1.17
CDC42BPAQ5VT25 AURKAPS2-201ENST00000454983 333 ntBASIC7.73□□□□□ -1.17
CDC42BPAQ5VT25 NDUFA5P9-201ENST00000472609 340 ntBASIC7.73□□□□□ -1.17
CDC42BPAQ5VT25 IGBP1P4-201ENST00000503202 879 ntBASIC7.73□□□□□ -1.17
CDC42BPAQ5VT25 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC7.73□□□□□ -1.17
CDC42BPAQ5VT25 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC7.73□□□□□ -1.17
CDC42BPAQ5VT25 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC7.73□□□□□ -1.17
CDC42BPAQ5VT25 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC7.73□□□□□ -1.17
CDC42BPAQ5VT25 AC019322.1-201ENST00000571869 389 ntBASIC7.73□□□□□ -1.17
CDC42BPAQ5VT25 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC7.73□□□□□ -1.17
CDC42BPAQ5VT25 AC020910.3-201ENST00000603701 874 ntBASIC7.73□□□□□ -1.17
CDC42BPAQ5VT25 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
CDC42BPAQ5VT25 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
CDC42BPAQ5VT25 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CDC42BPAQ5VT25 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
CDC42BPAQ5VT25 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
CDC42BPAQ5VT25 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
CDC42BPAQ5VT25 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CDC42BPAQ5VT25 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms