Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC6.05□□□□□ -1.44
CCDC38Q502W7 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.05□□□□□ -1.44
CCDC38Q502W7 MTCYBP21-201ENST00000443300 1113 ntBASIC6.05□□□□□ -1.44
CCDC38Q502W7 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC6.05□□□□□ -1.44
CCDC38Q502W7 AC007383.1-201ENST00000445875 636 ntBASIC6.05□□□□□ -1.44
CCDC38Q502W7 HMGB1P5-202ENST00000451497 985 ntBASIC6.05□□□□□ -1.44
CCDC38Q502W7 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC6.05□□□□□ -1.44
CCDC38Q502W7 FRG2FP-204ENST00000453982 852 ntBASIC6.05□□□□□ -1.44
CCDC38Q502W7 AP000547.1-201ENST00000454360 617 ntBASIC6.05□□□□□ -1.44
CCDC38Q502W7 PDCL3P4-201ENST00000489621 720 ntBASIC6.05□□□□□ -1.44
CCDC38Q502W7 AC083795.1-201ENST00000491760 320 ntBASIC6.05□□□□□ -1.44
CCDC38Q502W7 RN7SL362P-201ENST00000494228 267 ntBASIC6.05□□□□□ -1.44
CCDC38Q502W7 AL117692.1-201ENST00000494283 713 ntBASIC6.05□□□□□ -1.44
CCDC38Q502W7 APOBEC3AP1-201ENST00000511396 287 ntBASIC6.05□□□□□ -1.44
CCDC38Q502W7 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC6.05□□□□□ -1.44
CCDC38Q502W7 RN7SKP183-201ENST00000517169 324 ntBASIC6.05□□□□□ -1.44
CCDC38Q502W7 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC6.05□□□□□ -1.44
CCDC38Q502W7 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC6.05□□□□□ -1.44
CCDC38Q502W7 AC078899.1-201ENST00000521432 1185 ntBASIC6.05□□□□□ -1.44
CCDC38Q502W7 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.05□□□□□ -1.44
CCDC38Q502W7 AC130365.2-201ENST00000525882 1201 ntBASIC6.05□□□□□ -1.44
CCDC38Q502W7 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.05□□□□□ -1.44
CCDC38Q502W7 OR8X1P-201ENST00000534542 869 ntBASIC6.05□□□□□ -1.44
CCDC38Q502W7 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC6.05□□□□□ -1.44
CCDC38Q502W7 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC6.05□□□□□ -1.44
CCDC38Q502W7 AC126615.2-201ENST00000553003 515 ntBASIC6.05□□□□□ -1.44
CCDC38Q502W7 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC6.05□□□□□ -1.44
CCDC38Q502W7 AL049870.4-201ENST00000555741 486 ntBASIC6.05□□□□□ -1.44
CCDC38Q502W7 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC6.05□□□□□ -1.44
CCDC38Q502W7 AC090826.1-203ENST00000569235 490 ntBASIC6.05□□□□□ -1.44
CCDC38Q502W7 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC38Q502W7 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC6.05□□□□□ -1.44
CCDC38Q502W7 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.05□□□□□ -1.44
CCDC38Q502W7 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC6.05□□□□□ -1.44
CCDC38Q502W7 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC6.05□□□□□ -1.44
CCDC38Q502W7 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC6.05□□□□□ -1.44
CCDC38Q502W7 AL357562.1-201ENST00000624911 609 ntBASIC6.05□□□□□ -1.44
CCDC38Q502W7 AC103703.1-201ENST00000634783 663 ntBASIC6.05□□□□□ -1.44
CCDC38Q502W7 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC6.05□□□□□ -1.44
CCDC38Q502W7 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
CCDC38Q502W7 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC38Q502W7 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC38Q502W7 ZNF733P-202ENST00000444809 1573 ntBASIC6.05□□□□□ -1.44
CCDC38Q502W7 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC6.05□□□□□ -1.44
CCDC38Q502W7 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC38Q502W7 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC38Q502W7 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC6.05□□□□□ -1.44
CCDC38Q502W7 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC6.05□□□□□ -1.44
CCDC38Q502W7 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC6.05□□□□□ -1.44
CCDC38Q502W7 AC090181.3-201ENST00000624777 1514 ntBASIC6.04□□□□□ -1.44
CCDC38Q502W7 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC38Q502W7 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC38Q502W7 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC38Q502W7 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC38Q502W7 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
CCDC38Q502W7 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC38Q502W7 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
CCDC38Q502W7 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC38Q502W7 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC38Q502W7 RNA5SP232-201ENST00000364144 119 ntBASIC6.04□□□□□ -1.44
CCDC38Q502W7 GCNT6-201ENST00000379591 934 ntBASIC6.04□□□□□ -1.44
CCDC38Q502W7 MIR621-201ENST00000384919 96 ntBASIC6.04□□□□□ -1.44
CCDC38Q502W7 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.04□□□□□ -1.44
CCDC38Q502W7 AL034374.1-201ENST00000406329 351 ntBASIC6.04□□□□□ -1.44
CCDC38Q502W7 RNU2-17P-201ENST00000410290 190 ntBASIC6.04□□□□□ -1.44
CCDC38Q502W7 AC079809.1-201ENST00000415468 276 ntBASIC6.04□□□□□ -1.44
CCDC38Q502W7 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.04□□□□□ -1.44
CCDC38Q502W7 AL512637.2-201ENST00000431287 1256 ntBASIC6.04□□□□□ -1.44
CCDC38Q502W7 AL512661.1-201ENST00000434586 1253 ntBASIC6.04□□□□□ -1.44
CCDC38Q502W7 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
CCDC38Q502W7 MTND2P40-201ENST00000436718 841 ntBASIC6.04□□□□□ -1.44
CCDC38Q502W7 PCNPP2-201ENST00000441651 455 ntBASIC6.04□□□□□ -1.44
CCDC38Q502W7 ZNF736P11Y-201ENST00000442535 1213 ntBASIC6.04□□□□□ -1.44
CCDC38Q502W7 ZNF736P12Y-201ENST00000443152 1243 ntBASIC6.04□□□□□ -1.44
CCDC38Q502W7 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC6.04□□□□□ -1.44
CCDC38Q502W7 ZNF736P4Y-201ENST00000454995 1243 ntBASIC6.04□□□□□ -1.44
CCDC38Q502W7 AC104164.1-201ENST00000460282 590 ntBASIC6.04□□□□□ -1.44
CCDC38Q502W7 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC6.04□□□□□ -1.44
CCDC38Q502W7 PFN1P6-201ENST00000476786 399 ntBASIC6.04□□□□□ -1.44
CCDC38Q502W7 AC037198.2-201ENST00000478845 733 ntBASIC6.04□□□□□ -1.44
CCDC38Q502W7 RNA5SP230-201ENST00000517039 122 ntBASIC6.04□□□□□ -1.44
CCDC38Q502W7 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC6.04□□□□□ -1.44
CCDC38Q502W7 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC38Q502W7 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC6.04□□□□□ -1.44
CCDC38Q502W7 AC027026.1-201ENST00000532323 742 ntBASIC6.04□□□□□ -1.44
CCDC38Q502W7 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC6.04□□□□□ -1.44
CCDC38Q502W7 AL121594.2-201ENST00000541658 472 ntBASIC6.04□□□□□ -1.44
CCDC38Q502W7 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.04□□□□□ -1.44
CCDC38Q502W7 AC139697.1-201ENST00000548429 745 ntBASIC6.04□□□□□ -1.44
CCDC38Q502W7 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC6.04□□□□□ -1.44
CCDC38Q502W7 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC38Q502W7 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC6.04□□□□□ -1.44
CCDC38Q502W7 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.04□□□□□ -1.44
CCDC38Q502W7 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.04□□□□□ -1.44
CCDC38Q502W7 ABI1P1-201ENST00000603375 1120 ntBASIC6.04□□□□□ -1.44
CCDC38Q502W7 AC005034.4-201ENST00000603612 899 ntBASIC6.04□□□□□ -1.44
CCDC38Q502W7 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC6.04□□□□□ -1.44
CCDC38Q502W7 AC025175.1-201ENST00000606482 759 ntBASIC6.04□□□□□ -1.44
CCDC38Q502W7 MIR8084-201ENST00000614105 89 ntBASIC6.04□□□□□ -1.44
CCDC38Q502W7 AC021106.3-201ENST00000623925 531 ntBASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms