Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CCDC58Q4VC31 AC017079.1-201ENST00000333650 415 ntBASIC4.81□□□□□ -1.64
CCDC58Q4VC31 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC58Q4VC31 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC58Q4VC31 SNORA64.1-201ENST00000362600 132 ntBASIC4.81□□□□□ -1.64
CCDC58Q4VC31 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC58Q4VC31 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CCDC58Q4VC31 MIR551A-201ENST00000385042 96 ntBASIC4.81□□□□□ -1.64
CCDC58Q4VC31 SNORA68.2-201ENST00000391263 128 ntBASIC4.81□□□□□ -1.64
CCDC58Q4VC31 RPS24P12-201ENST00000402084 394 ntBASIC4.81□□□□□ -1.64
CCDC58Q4VC31 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC4.81□□□□□ -1.64
CCDC58Q4VC31 CYCSP10-201ENST00000417973 294 ntBASIC4.81□□□□□ -1.64
CCDC58Q4VC31 OR2AH1P-201ENST00000425717 928 ntBASIC4.81□□□□□ -1.64
CCDC58Q4VC31 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC58Q4VC31 AC090018.1-201ENST00000434369 367 ntBASIC4.81□□□□□ -1.64
CCDC58Q4VC31 HMGB3P9-201ENST00000441799 583 ntBASIC4.81□□□□□ -1.64
CCDC58Q4VC31 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC58Q4VC31 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC58Q4VC31 RN7SL273P-201ENST00000481561 299 ntBASIC4.81□□□□□ -1.64
CCDC58Q4VC31 RN7SL568P-201ENST00000493069 298 ntBASIC4.81□□□□□ -1.64
CCDC58Q4VC31 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC58Q4VC31 NENFP3-201ENST00000503735 313 ntBASIC4.81□□□□□ -1.64
CCDC58Q4VC31 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC58Q4VC31 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC4.81□□□□□ -1.64
CCDC58Q4VC31 AC138938.1-201ENST00000515431 782 ntBASIC4.81□□□□□ -1.64
CCDC58Q4VC31 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC58Q4VC31 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.81□□□□□ -1.64
CCDC58Q4VC31 MED21-206ENST00000546323 575 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC58Q4VC31 OR11H3P-201ENST00000554547 982 ntBASIC4.81□□□□□ -1.64
CCDC58Q4VC31 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC4.81□□□□□ -1.64
CCDC58Q4VC31 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC58Q4VC31 AC022001.1-201ENST00000605193 268 ntBASIC4.81□□□□□ -1.64
CCDC58Q4VC31 AC244107.2-201ENST00000611773 76 ntBASIC4.81□□□□□ -1.64
CCDC58Q4VC31 uc_338.29-201ENST00000615099 168 ntBASIC4.81□□□□□ -1.64
CCDC58Q4VC31 MIR6721-201ENST00000617181 87 ntBASIC4.81□□□□□ -1.64
CCDC58Q4VC31 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC58Q4VC31 AC007204.1-201ENST00000621794 555 ntBASIC4.81□□□□□ -1.64
CCDC58Q4VC31 AC135068.5-201ENST00000624197 983 ntBASIC4.81□□□□□ -1.64
CCDC58Q4VC31 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC58Q4VC31 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
CCDC58Q4VC31 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC58Q4VC31 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC58Q4VC31 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
CCDC58Q4VC31 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC58Q4VC31 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC58Q4VC31 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.8□□□□□ -1.64
CCDC58Q4VC31 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC58Q4VC31 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC58Q4VC31 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CCDC58Q4VC31 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC58Q4VC31 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CCDC58Q4VC31 RN7SKP153-201ENST00000365026 316 ntBASIC4.8□□□□□ -1.64
CCDC58Q4VC31 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC4.8□□□□□ -1.64
CCDC58Q4VC31 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC58Q4VC31 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC58Q4VC31 AC004690.1-201ENST00000418216 328 ntBASIC4.8□□□□□ -1.64
CCDC58Q4VC31 AKR1B10P1-201ENST00000425765 942 ntBASIC4.8□□□□□ -1.64
CCDC58Q4VC31 AC124944.2-201ENST00000429866 1242 ntBASIC4.8□□□□□ -1.64
CCDC58Q4VC31 KCTD9P1-201ENST00000430462 1167 ntBASIC4.8□□□□□ -1.64
CCDC58Q4VC31 RPL12P17-201ENST00000432393 498 ntBASIC4.8□□□□□ -1.64
CCDC58Q4VC31 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC58Q4VC31 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC4.8□□□□□ -1.64
CCDC58Q4VC31 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC58Q4VC31 CST12P-201ENST00000457644 362 ntBASIC4.8□□□□□ -1.64
CCDC58Q4VC31 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC4.8□□□□□ -1.64
CCDC58Q4VC31 RPL29P23-201ENST00000486188 442 ntBASIC4.8□□□□□ -1.64
CCDC58Q4VC31 RBBP4P1-201ENST00000502424 1276 ntBASIC4.8□□□□□ -1.64
CCDC58Q4VC31 AC106822.1-201ENST00000502647 526 ntBASIC4.8□□□□□ -1.64
CCDC58Q4VC31 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.8□□□□□ -1.64
CCDC58Q4VC31 LSM3P4-201ENST00000502948 309 ntBASIC4.8□□□□□ -1.64
CCDC58Q4VC31 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.8□□□□□ -1.64
CCDC58Q4VC31 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC58Q4VC31 LDHAP1-201ENST00000509421 992 ntBASIC4.8□□□□□ -1.64
CCDC58Q4VC31 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC58Q4VC31 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC58Q4VC31 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC58Q4VC31 MINCR-206ENST00000524335 499 ntTSL 2 BASIC4.8□□□□□ -1.64
CCDC58Q4VC31 AC084121.1-201ENST00000533882 835 ntBASIC4.8□□□□□ -1.64
CCDC58Q4VC31 AC121758.1-202ENST00000556917 658 ntBASIC4.8□□□□□ -1.64
CCDC58Q4VC31 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC58Q4VC31 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC4.8□□□□□ -1.64
CCDC58Q4VC31 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC58Q4VC31 AC005899.6-201ENST00000620729 297 ntBASIC4.8□□□□□ -1.64
CCDC58Q4VC31 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
CCDC58Q4VC31 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC58Q4VC31 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC58Q4VC31 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
CCDC58Q4VC31 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
CCDC58Q4VC31 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC4.8□□□□□ -1.64
CCDC58Q4VC31 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC58Q4VC31 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC58Q4VC31 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC58Q4VC31 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC58Q4VC31 UGT2B26P-201ENST00000508672 1613 ntBASIC4.79□□□□□ -1.64
CCDC58Q4VC31 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC58Q4VC31 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC58Q4VC31 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.79□□□□□ -1.64
CCDC58Q4VC31 AC104118.1-201ENST00000607625 1589 ntBASIC4.79□□□□□ -1.64
CCDC58Q4VC31 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC58Q4VC31 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 144.7 ms