Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC7.04□□□□□ -1.28
SOX4Q06945 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC7.04□□□□□ -1.28
SOX4Q06945 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC7.04□□□□□ -1.28
SOX4Q06945 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC7.04□□□□□ -1.28
SOX4Q06945 UBE2V1P8-201ENST00000437166 265 ntBASIC7.04□□□□□ -1.28
SOX4Q06945 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC7.04□□□□□ -1.28
SOX4Q06945 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC7.04□□□□□ -1.28
SOX4Q06945 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC7.04□□□□□ -1.28
SOX4Q06945 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC7.04□□□□□ -1.28
SOX4Q06945 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC7.04□□□□□ -1.28
SOX4Q06945 EPS15P1-201ENST00000448836 336 ntBASIC7.04□□□□□ -1.28
SOX4Q06945 CCRL1P1-201ENST00000449542 1053 ntBASIC7.04□□□□□ -1.28
SOX4Q06945 KATNBL1P6-201ENST00000453433 915 ntBASIC7.04□□□□□ -1.28
SOX4Q06945 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC7.04□□□□□ -1.28
SOX4Q06945 RN7SL168P-201ENST00000463821 279 ntBASIC7.04□□□□□ -1.28
SOX4Q06945 CCDC75P1-201ENST00000469247 791 ntBASIC7.04□□□□□ -1.28
SOX4Q06945 H3F3AP5-201ENST00000475267 429 ntBASIC7.04□□□□□ -1.28
SOX4Q06945 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC7.04□□□□□ -1.28
SOX4Q06945 AC117395.1-201ENST00000487390 403 ntBASIC7.04□□□□□ -1.28
SOX4Q06945 RPL37P23-201ENST00000492641 294 ntBASIC7.04□□□□□ -1.28
SOX4Q06945 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC7.04□□□□□ -1.28
SOX4Q06945 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC7.04□□□□□ -1.28
SOX4Q06945 AC114781.4-201ENST00000513707 639 ntBASIC7.04□□□□□ -1.28
SOX4Q06945 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
SOX4Q06945 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
SOX4Q06945 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC7.04□□□□□ -1.28
SOX4Q06945 AL162632.2-201ENST00000553933 399 ntBASIC7.04□□□□□ -1.28
SOX4Q06945 AC007954.1-201ENST00000554198 494 ntBASIC7.04□□□□□ -1.28
SOX4Q06945 BGLT3-201ENST00000564523 994 ntBASIC7.04□□□□□ -1.28
SOX4Q06945 AC009101.1-201ENST00000568135 242 ntBASIC7.04□□□□□ -1.28
SOX4Q06945 AC012414.6-201ENST00000568241 401 ntBASIC7.04□□□□□ -1.28
SOX4Q06945 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC7.04□□□□□ -1.28
SOX4Q06945 OR7A8P-201ENST00000595427 913 ntBASIC7.04□□□□□ -1.28
SOX4Q06945 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC7.04□□□□□ -1.28
SOX4Q06945 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
SOX4Q06945 AC007038.2-201ENST00000608095 740 ntBASIC7.04□□□□□ -1.28
SOX4Q06945 AC019131.2-201ENST00000609071 870 ntBASIC7.04□□□□□ -1.28
SOX4Q06945 AL592148.2-201ENST00000612210 372 ntBASIC7.04□□□□□ -1.28
SOX4Q06945 AC072046.2-201ENST00000618366 268 ntBASIC7.04□□□□□ -1.28
SOX4Q06945 AC010325.3-201ENST00000641084 394 ntBASIC7.04□□□□□ -1.28
SOX4Q06945 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
SOX4Q06945 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC7.04□□□□□ -1.28
SOX4Q06945 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC7.04□□□□□ -1.28
SOX4Q06945 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
SOX4Q06945 CTNNA1P1-201ENST00000515849 2728 ntBASIC7.04□□□□□ -1.28
SOX4Q06945 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
SOX4Q06945 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
SOX4Q06945 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
SOX4Q06945 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
SOX4Q06945 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
SOX4Q06945 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC7.03□□□□□ -1.28
SOX4Q06945 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SOX4Q06945 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SOX4Q06945 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SOX4Q06945 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SOX4Q06945 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC7.03□□□□□ -1.28
SOX4Q06945 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SOX4Q06945 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SOX4Q06945 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
SOX4Q06945 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
SOX4Q06945 AC012213.2-201ENST00000562917 4597 ntBASIC7.03□□□□□ -1.28
SOX4Q06945 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SOX4Q06945 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SOX4Q06945 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
SOX4Q06945 RNU6-1251P-201ENST00000364502 107 ntBASIC7.03□□□□□ -1.28
SOX4Q06945 RNA5SP485-201ENST00000365053 119 ntBASIC7.03□□□□□ -1.28
SOX4Q06945 RN7SKP187-201ENST00000365536 330 ntBASIC7.03□□□□□ -1.28
SOX4Q06945 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SOX4Q06945 YWHAZP4-201ENST00000392459 708 ntBASIC7.03□□□□□ -1.28
SOX4Q06945 RNA5SP198-201ENST00000410376 127 ntBASIC7.03□□□□□ -1.28
SOX4Q06945 RN7SKP86-201ENST00000410454 332 ntBASIC7.03□□□□□ -1.28
SOX4Q06945 CEACAMP8-201ENST00000413902 580 ntBASIC7.03□□□□□ -1.28
SOX4Q06945 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC7.03□□□□□ -1.28
SOX4Q06945 AC009784.1-201ENST00000426484 460 ntBASIC7.03□□□□□ -1.28
SOX4Q06945 AC010975.2-201ENST00000427781 588 ntBASIC7.03□□□□□ -1.28
SOX4Q06945 MED14P1-201ENST00000430517 648 ntBASIC7.03□□□□□ -1.28
SOX4Q06945 AC091862.1-201ENST00000438016 1100 ntBASIC7.03□□□□□ -1.28
SOX4Q06945 AC007383.1-201ENST00000445875 636 ntBASIC7.03□□□□□ -1.28
SOX4Q06945 ZNF619P1-201ENST00000446539 752 ntBASIC7.03□□□□□ -1.28
SOX4Q06945 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC7.03□□□□□ -1.28
SOX4Q06945 AL050341.1-201ENST00000447743 313 ntBASIC7.03□□□□□ -1.28
SOX4Q06945 GAPDHP36-201ENST00000480688 918 ntBASIC7.03□□□□□ -1.28
SOX4Q06945 AC016687.1-201ENST00000482574 353 ntBASIC7.03□□□□□ -1.28
SOX4Q06945 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC7.03□□□□□ -1.28
SOX4Q06945 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC7.03□□□□□ -1.28
SOX4Q06945 RNU6-678P-201ENST00000516832 109 ntBASIC7.03□□□□□ -1.28
SOX4Q06945 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC7.03□□□□□ -1.28
SOX4Q06945 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC7.03□□□□□ -1.28
SOX4Q06945 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC7.03□□□□□ -1.28
SOX4Q06945 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC7.03□□□□□ -1.28
SOX4Q06945 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC7.03□□□□□ -1.28
SOX4Q06945 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC7.03□□□□□ -1.28
SOX4Q06945 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC7.03□□□□□ -1.28
SOX4Q06945 RN7SL208P-201ENST00000577964 296 ntBASIC7.03□□□□□ -1.28
SOX4Q06945 RN7SL475P-201ENST00000583379 298 ntBASIC7.03□□□□□ -1.28
SOX4Q06945 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC7.03□□□□□ -1.28
SOX4Q06945 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC7.03□□□□□ -1.28
SOX4Q06945 VN1R92P-201ENST00000598511 928 ntBASIC7.03□□□□□ -1.28
SOX4Q06945 AC097505.1-201ENST00000610199 565 ntBASIC7.03□□□□□ -1.28
SOX4Q06945 AC138932.5-201ENST00000617759 563 ntBASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms