Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AC091932.2-201ENST00000623014 291 ntBASIC5.13□□□□□ -1.59
HMGCS1Q01581 AL691477.1-201ENST00000624398 162 ntBASIC5.13□□□□□ -1.59
HMGCS1Q01581 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMGCS1Q01581 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMGCS1Q01581 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.13□□□□□ -1.59
HMGCS1Q01581 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
HMGCS1Q01581 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMGCS1Q01581 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
HMGCS1Q01581 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.12□□□□□ -1.59
HMGCS1Q01581 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HMGCS1Q01581 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.12□□□□□ -1.59
HMGCS1Q01581 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
HMGCS1Q01581 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.12□□□□□ -1.59
HMGCS1Q01581 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
HMGCS1Q01581 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.12□□□□□ -1.59
HMGCS1Q01581 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
HMGCS1Q01581 MIR323A-201ENST00000362199 86 ntBASIC5.12□□□□□ -1.59
HMGCS1Q01581 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.12□□□□□ -1.59
HMGCS1Q01581 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HMGCS1Q01581 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
HMGCS1Q01581 AL512422.1-201ENST00000407033 553 ntBASIC5.12□□□□□ -1.59
HMGCS1Q01581 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.12□□□□□ -1.59
HMGCS1Q01581 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.12□□□□□ -1.59
HMGCS1Q01581 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC5.12□□□□□ -1.59
HMGCS1Q01581 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.12□□□□□ -1.59
HMGCS1Q01581 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.12□□□□□ -1.59
HMGCS1Q01581 NOP56P2-201ENST00000447491 769 ntBASIC5.12□□□□□ -1.59
HMGCS1Q01581 RANP1-206ENST00000455094 651 ntBASIC5.12□□□□□ -1.59
HMGCS1Q01581 RN7SL174P-201ENST00000475578 289 ntBASIC5.12□□□□□ -1.59
HMGCS1Q01581 AC135999.1-201ENST00000478962 479 ntBASIC5.12□□□□□ -1.59
HMGCS1Q01581 RPL7P41-201ENST00000485823 957 ntBASIC5.12□□□□□ -1.59
HMGCS1Q01581 EIF3KP3-201ENST00000514461 639 ntBASIC5.12□□□□□ -1.59
HMGCS1Q01581 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.12□□□□□ -1.59
HMGCS1Q01581 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.12□□□□□ -1.59
HMGCS1Q01581 MIR1273E-201ENST00000581165 102 ntBASIC5.12□□□□□ -1.59
HMGCS1Q01581 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.12□□□□□ -1.59
HMGCS1Q01581 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.12□□□□□ -1.59
HMGCS1Q01581 AC104695.2-201ENST00000605056 775 ntBASIC5.12□□□□□ -1.59
HMGCS1Q01581 AC000068.2-201ENST00000608816 460 ntBASIC5.12□□□□□ -1.59
HMGCS1Q01581 MIR6839-201ENST00000620425 113 ntBASIC5.12□□□□□ -1.59
HMGCS1Q01581 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC5.12□□□□□ -1.59
HMGCS1Q01581 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.12□□□□□ -1.59
HMGCS1Q01581 AC073869.7-201ENST00000640874 297 ntBASIC5.12□□□□□ -1.59
HMGCS1Q01581 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
HMGCS1Q01581 ADAM5-202ENST00000399789 1942 ntBASIC5.12□□□□□ -1.59
HMGCS1Q01581 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
HMGCS1Q01581 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.12□□□□□ -1.59
HMGCS1Q01581 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
HMGCS1Q01581 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.12□□□□□ -1.59
HMGCS1Q01581 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HMGCS1Q01581 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.12□□□□□ -1.59
HMGCS1Q01581 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
HMGCS1Q01581 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
HMGCS1Q01581 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
HMGCS1Q01581 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HMGCS1Q01581 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HMGCS1Q01581 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
HMGCS1Q01581 AP005432.1-201ENST00000580891 3485 ntBASIC5.11□□□□□ -1.59
HMGCS1Q01581 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HMGCS1Q01581 MIR133B-201ENST00000362210 119 ntBASIC5.11□□□□□ -1.59
HMGCS1Q01581 RNA5SP234-201ENST00000363916 119 ntBASIC5.11□□□□□ -1.59
HMGCS1Q01581 RNA5SP242-201ENST00000364171 118 ntBASIC5.11□□□□□ -1.59
HMGCS1Q01581 AC007618.1-201ENST00000366455 732 ntBASIC5.11□□□□□ -1.59
HMGCS1Q01581 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.11□□□□□ -1.59
HMGCS1Q01581 PRUNEP1-201ENST00000425846 705 ntBASIC5.11□□□□□ -1.59
HMGCS1Q01581 NAP1L4P2-201ENST00000425958 899 ntBASIC5.11□□□□□ -1.59
HMGCS1Q01581 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.11□□□□□ -1.59
HMGCS1Q01581 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.11□□□□□ -1.59
HMGCS1Q01581 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.11□□□□□ -1.59
HMGCS1Q01581 PRPF38AP1-201ENST00000451976 933 ntBASIC5.11□□□□□ -1.59
HMGCS1Q01581 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.11□□□□□ -1.59
HMGCS1Q01581 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.11□□□□□ -1.59
HMGCS1Q01581 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.11□□□□□ -1.59
HMGCS1Q01581 RPSAP39-201ENST00000467439 883 ntBASIC5.11□□□□□ -1.59
HMGCS1Q01581 CBX1P5-201ENST00000475330 559 ntBASIC5.11□□□□□ -1.59
HMGCS1Q01581 DEFB109A-201ENST00000482450 265 ntBASIC5.11□□□□□ -1.59
HMGCS1Q01581 RN7SL101P-201ENST00000496350 279 ntBASIC5.11□□□□□ -1.59
HMGCS1Q01581 RPS24P16-201ENST00000497294 392 ntBASIC5.11□□□□□ -1.59
HMGCS1Q01581 AC090638.1-201ENST00000498296 909 ntBASIC5.11□□□□□ -1.59
HMGCS1Q01581 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.11□□□□□ -1.59
HMGCS1Q01581 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.11□□□□□ -1.59
HMGCS1Q01581 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.11□□□□□ -1.59
HMGCS1Q01581 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.11□□□□□ -1.59
HMGCS1Q01581 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.11□□□□□ -1.59
HMGCS1Q01581 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
HMGCS1Q01581 AC005341.1-201ENST00000571086 708 ntBASIC5.11□□□□□ -1.59
HMGCS1Q01581 AC019322.1-201ENST00000571869 389 ntBASIC5.11□□□□□ -1.59
HMGCS1Q01581 RBM22P1-201ENST00000578589 1214 ntBASIC5.11□□□□□ -1.59
HMGCS1Q01581 SNORD95-201ENST00000579879 68 ntBASIC5.11□□□□□ -1.59
HMGCS1Q01581 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.11□□□□□ -1.59
HMGCS1Q01581 AC011445.2-201ENST00000599274 173 ntBASIC5.11□□□□□ -1.59
HMGCS1Q01581 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.11□□□□□ -1.59
HMGCS1Q01581 AC004477.3-201ENST00000614061 590 ntBASIC5.11□□□□□ -1.59
HMGCS1Q01581 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
HMGCS1Q01581 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HMGCS1Q01581 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.11□□□□□ -1.59
HMGCS1Q01581 AP005435.3-201ENST00000531260 3198 ntBASIC5.11□□□□□ -1.59
HMGCS1Q01581 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HMGCS1Q01581 CDY11P-201ENST00000447168 1651 ntBASIC5.11□□□□□ -1.59
HMGCS1Q01581 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms