Protein–RNA interactions for Protein: P63316

TNNC1, Troponin C, slow skeletal and cardiac muscles, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNC1P63316 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.84□□□□□ -1.47
TNNC1P63316 BLZF2P-201ENST00000553776 1130 ntBASIC5.84□□□□□ -1.47
TNNC1P63316 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.84□□□□□ -1.47
TNNC1P63316 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.84□□□□□ -1.47
TNNC1P63316 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.84□□□□□ -1.47
TNNC1P63316 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.84□□□□□ -1.47
TNNC1P63316 AC009852.2-201ENST00000567898 485 ntBASIC5.84□□□□□ -1.47
TNNC1P63316 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.84□□□□□ -1.47
TNNC1P63316 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.84□□□□□ -1.47
TNNC1P63316 AC060766.1-201ENST00000590824 627 ntBASIC5.84□□□□□ -1.47
TNNC1P63316 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.84□□□□□ -1.47
TNNC1P63316 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.84□□□□□ -1.47
TNNC1P63316 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.84□□□□□ -1.47
TNNC1P63316 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
TNNC1P63316 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
TNNC1P63316 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.84□□□□□ -1.48
TNNC1P63316 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.84□□□□□ -1.48
TNNC1P63316 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
TNNC1P63316 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.48
TNNC1P63316 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.84□□□□□ -1.48
TNNC1P63316 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
TNNC1P63316 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.83□□□□□ -1.48
TNNC1P63316 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
TNNC1P63316 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
TNNC1P63316 TCP11X1-202ENST00000622971 1372 ntBASIC5.83□□□□□ -1.48
TNNC1P63316 MUC2-202ENST00000613187 4845 ntBASIC5.83□□□□□ -1.48
TNNC1P63316 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
TNNC1P63316 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.83□□□□□ -1.48
TNNC1P63316 AL078621.3-201ENST00000623707 2042 ntBASIC5.83□□□□□ -1.48
TNNC1P63316 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
TNNC1P63316 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
TNNC1P63316 PPIAP9-201ENST00000403866 498 ntBASIC5.83□□□□□ -1.48
TNNC1P63316 AL391361.1-201ENST00000405580 489 ntBASIC5.83□□□□□ -1.48
TNNC1P63316 AL133325.1-201ENST00000421090 382 ntBASIC5.83□□□□□ -1.48
TNNC1P63316 PRUNEP1-201ENST00000425846 705 ntBASIC5.83□□□□□ -1.48
TNNC1P63316 TCEA1P3-201ENST00000443005 880 ntBASIC5.83□□□□□ -1.48
TNNC1P63316 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.83□□□□□ -1.48
TNNC1P63316 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.83□□□□□ -1.48
TNNC1P63316 AC018638.3-201ENST00000461273 132 ntBASIC5.83□□□□□ -1.48
TNNC1P63316 AP000797.2-201ENST00000475768 606 ntBASIC5.83□□□□□ -1.48
TNNC1P63316 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.83□□□□□ -1.48
TNNC1P63316 COX6B1P2-201ENST00000489624 230 ntBASIC5.83□□□□□ -1.48
TNNC1P63316 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.83□□□□□ -1.48
TNNC1P63316 RNU6-964P-201ENST00000516524 69 ntBASIC5.83□□□□□ -1.48
TNNC1P63316 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.83□□□□□ -1.48
TNNC1P63316 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.83□□□□□ -1.48
TNNC1P63316 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.83□□□□□ -1.48
TNNC1P63316 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.83□□□□□ -1.48
TNNC1P63316 AC106730.2-201ENST00000566641 540 ntBASIC5.83□□□□□ -1.48
TNNC1P63316 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.83□□□□□ -1.48
TNNC1P63316 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.83□□□□□ -1.48
TNNC1P63316 AC009237.13-201ENST00000603193 276 ntBASIC5.83□□□□□ -1.48
TNNC1P63316 AP000864.1-201ENST00000609424 650 ntBASIC5.83□□□□□ -1.48
TNNC1P63316 AC022467.1-201ENST00000614738 749 ntBASIC5.83□□□□□ -1.48
TNNC1P63316 AC241377.1-201ENST00000619797 406 ntBASIC5.83□□□□□ -1.48
TNNC1P63316 AC091932.2-201ENST00000623014 291 ntBASIC5.83□□□□□ -1.48
TNNC1P63316 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.83□□□□□ -1.48
TNNC1P63316 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.83□□□□□ -1.48
TNNC1P63316 AC073869.8-201ENST00000641806 335 ntBASIC5.83□□□□□ -1.48
TNNC1P63316 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
TNNC1P63316 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
TNNC1P63316 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.83□□□□□ -1.48
TNNC1P63316 AC008079.2-201ENST00000623543 20396 ntBASIC5.83□□□□□ -1.48
TNNC1P63316 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.83□□□□□ -1.48
TNNC1P63316 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
TNNC1P63316 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
TNNC1P63316 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.82□□□□□ -1.48
TNNC1P63316 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.82□□□□□ -1.48
TNNC1P63316 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.82□□□□□ -1.48
TNNC1P63316 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
TNNC1P63316 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
TNNC1P63316 AC104623.2-202ENST00000623477 4002 ntBASIC5.82□□□□□ -1.48
TNNC1P63316 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TNNC1P63316 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.82□□□□□ -1.48
TNNC1P63316 Z95331.1-201ENST00000623075 23112 ntBASIC5.82□□□□□ -1.48
TNNC1P63316 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.82□□□□□ -1.48
TNNC1P63316 MIR133B-201ENST00000362210 119 ntBASIC5.82□□□□□ -1.48
TNNC1P63316 RN7SKP162-201ENST00000363605 345 ntBASIC5.82□□□□□ -1.48
TNNC1P63316 RNA5SP335-201ENST00000363817 110 ntBASIC5.82□□□□□ -1.48
TNNC1P63316 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TNNC1P63316 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.82□□□□□ -1.48
TNNC1P63316 SNORA48.4-201ENST00000391089 134 ntBASIC5.82□□□□□ -1.48
TNNC1P63316 AL133388.1-201ENST00000404509 287 ntBASIC5.82□□□□□ -1.48
TNNC1P63316 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.82□□□□□ -1.48
TNNC1P63316 RPL7AP49-201ENST00000429522 581 ntBASIC5.82□□□□□ -1.48
TNNC1P63316 CFL1P1-202ENST00000432948 411 ntBASIC5.82□□□□□ -1.48
TNNC1P63316 AL591438.1-201ENST00000433508 581 ntBASIC5.82□□□□□ -1.48
TNNC1P63316 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.82□□□□□ -1.48
TNNC1P63316 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.82□□□□□ -1.48
TNNC1P63316 AC092754.1-201ENST00000472975 479 ntBASIC5.82□□□□□ -1.48
TNNC1P63316 OR2AO1P-201ENST00000476497 403 ntBASIC5.82□□□□□ -1.48
TNNC1P63316 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.82□□□□□ -1.48
TNNC1P63316 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC5.82□□□□□ -1.48
TNNC1P63316 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.82□□□□□ -1.48
TNNC1P63316 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.82□□□□□ -1.48
TNNC1P63316 HMGB1P40-201ENST00000525121 540 ntBASIC5.82□□□□□ -1.48
TNNC1P63316 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.82□□□□□ -1.48
TNNC1P63316 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.82□□□□□ -1.48
TNNC1P63316 AC005341.1-201ENST00000571086 708 ntBASIC5.82□□□□□ -1.48
TNNC1P63316 AC023389.2-201ENST00000580031 955 ntBASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms