Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
GFRA1P56159 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
GFRA1P56159 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
GFRA1P56159 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
GFRA1P56159 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
GFRA1P56159 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
GFRA1P56159 AC046144.1-201ENST00000478559 1853 ntBASIC6.11□□□□□ -1.43
GFRA1P56159 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
GFRA1P56159 AL158152.1-201ENST00000602652 1435 ntBASIC6.11□□□□□ -1.43
GFRA1P56159 AC068733.2-201ENST00000605434 1418 ntBASIC6.11□□□□□ -1.43
GFRA1P56159 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC6.11□□□□□ -1.43
GFRA1P56159 AC138915.4-201ENST00000565549 4147 ntBASIC6.11□□□□□ -1.43
GFRA1P56159 MTND4P34-201ENST00000572715 1371 ntBASIC6.11□□□□□ -1.43
GFRA1P56159 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
GFRA1P56159 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
GFRA1P56159 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
GFRA1P56159 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
GFRA1P56159 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
GFRA1P56159 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
GFRA1P56159 SNORA4.1-201ENST00000364263 144 ntBASIC6.11□□□□□ -1.43
GFRA1P56159 SNORD94-201ENST00000386037 137 ntBASIC6.11□□□□□ -1.43
GFRA1P56159 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
GFRA1P56159 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC6.11□□□□□ -1.43
GFRA1P56159 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC6.11□□□□□ -1.43
GFRA1P56159 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC6.11□□□□□ -1.43
GFRA1P56159 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC6.11□□□□□ -1.43
GFRA1P56159 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC6.11□□□□□ -1.43
GFRA1P56159 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.11□□□□□ -1.43
GFRA1P56159 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
GFRA1P56159 AC064862.5-201ENST00000440618 334 ntBASIC6.11□□□□□ -1.43
GFRA1P56159 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC6.11□□□□□ -1.43
GFRA1P56159 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC6.11□□□□□ -1.43
GFRA1P56159 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC6.11□□□□□ -1.43
GFRA1P56159 OR52E3P-201ENST00000452083 936 ntBASIC6.11□□□□□ -1.43
GFRA1P56159 KATNBL1P6-201ENST00000453433 915 ntBASIC6.11□□□□□ -1.43
GFRA1P56159 MTCYBP1-201ENST00000454315 1119 ntBASIC6.11□□□□□ -1.43
GFRA1P56159 AC099340.1-201ENST00000475247 599 ntBASIC6.11□□□□□ -1.43
GFRA1P56159 RN7SL502P-201ENST00000481857 290 ntBASIC6.11□□□□□ -1.43
GFRA1P56159 AC109486.1-201ENST00000486833 374 ntBASIC6.11□□□□□ -1.43
GFRA1P56159 SNRPCP11-201ENST00000492453 205 ntBASIC6.11□□□□□ -1.43
GFRA1P56159 SETP14-201ENST00000497538 873 ntBASIC6.11□□□□□ -1.43
GFRA1P56159 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC6.11□□□□□ -1.43
GFRA1P56159 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC6.11□□□□□ -1.43
GFRA1P56159 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC6.11□□□□□ -1.43
GFRA1P56159 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC6.11□□□□□ -1.43
GFRA1P56159 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC6.11□□□□□ -1.43
GFRA1P56159 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC6.11□□□□□ -1.43
GFRA1P56159 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC6.11□□□□□ -1.43
GFRA1P56159 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC6.11□□□□□ -1.43
GFRA1P56159 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC6.11□□□□□ -1.43
GFRA1P56159 AC090312.2-201ENST00000582687 378 ntBASIC6.11□□□□□ -1.43
GFRA1P56159 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC6.11□□□□□ -1.43
GFRA1P56159 AC005479.3-201ENST00000602790 431 ntBASIC6.11□□□□□ -1.43
GFRA1P56159 AC092354.1-201ENST00000606057 376 ntBASIC6.11□□□□□ -1.43
GFRA1P56159 NQO2-209ENST00000606474 470 ntTSL 3 BASIC6.11□□□□□ -1.43
GFRA1P56159 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC6.11□□□□□ -1.43
GFRA1P56159 AC239868.4-201ENST00000608318 671 ntBASIC6.11□□□□□ -1.43
GFRA1P56159 AL391497.1-201ENST00000608671 547 ntBASIC6.11□□□□□ -1.43
GFRA1P56159 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
GFRA1P56159 AC092794.1-201ENST00000612734 582 ntBASIC6.11□□□□□ -1.43
GFRA1P56159 AL445670.1-201ENST00000618889 801 ntBASIC6.11□□□□□ -1.43
GFRA1P56159 AL031667.3-201ENST00000620124 655 ntBASIC6.11□□□□□ -1.43
GFRA1P56159 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC6.11□□□□□ -1.43
GFRA1P56159 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC6.11□□□□□ -1.43
GFRA1P56159 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC6.11□□□□□ -1.43
GFRA1P56159 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
GFRA1P56159 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
GFRA1P56159 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
GFRA1P56159 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
GFRA1P56159 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
GFRA1P56159 SPATA31B1P-201ENST00000434692 4016 ntBASIC6.11□□□□□ -1.43
GFRA1P56159 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
GFRA1P56159 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
GFRA1P56159 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC6.11□□□□□ -1.43
GFRA1P56159 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
GFRA1P56159 MAPK10-270ENST00000641102 3538 ntBASIC6.11□□□□□ -1.43
GFRA1P56159 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC6.11□□□□□ -1.43
GFRA1P56159 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC6.1□□□□□ -1.43
GFRA1P56159 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
GFRA1P56159 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
GFRA1P56159 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
GFRA1P56159 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC6.1□□□□□ -1.43
GFRA1P56159 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
GFRA1P56159 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
GFRA1P56159 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
GFRA1P56159 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
GFRA1P56159 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
GFRA1P56159 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
GFRA1P56159 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC6.1□□□□□ -1.43
GFRA1P56159 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
GFRA1P56159 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
GFRA1P56159 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC6.1□□□□□ -1.43
GFRA1P56159 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
GFRA1P56159 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
GFRA1P56159 AL161909.1-201ENST00000397390 712 ntBASIC6.1□□□□□ -1.43
GFRA1P56159 AL034417.1-201ENST00000399343 800 ntBASIC6.1□□□□□ -1.43
GFRA1P56159 TPMTP3-201ENST00000411928 735 ntBASIC6.1□□□□□ -1.43
GFRA1P56159 OR51A3P-201ENST00000413596 924 ntBASIC6.1□□□□□ -1.43
GFRA1P56159 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC6.1□□□□□ -1.43
GFRA1P56159 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms