Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 IGKV2-18-201ENST00000522607 343 ntBASIC5.07□□□□□ -1.6
LIM2P55344 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
LIM2P55344 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.07□□□□□ -1.6
LIM2P55344 AC126177.5-201ENST00000549599 178 ntBASIC5.07□□□□□ -1.6
LIM2P55344 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.07□□□□□ -1.6
LIM2P55344 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.07□□□□□ -1.6
LIM2P55344 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.07□□□□□ -1.6
LIM2P55344 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LIM2P55344 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.07□□□□□ -1.6
LIM2P55344 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC5.07□□□□□ -1.6
LIM2P55344 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.07□□□□□ -1.6
LIM2P55344 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC5.07□□□□□ -1.6
LIM2P55344 AC009027.1-201ENST00000604510 479 ntBASIC5.07□□□□□ -1.6
LIM2P55344 MIR6862-1-201ENST00000613016 70 ntBASIC5.07□□□□□ -1.6
LIM2P55344 AP005212.4-201ENST00000614206 710 ntBASIC5.07□□□□□ -1.6
LIM2P55344 MIR6862-2-201ENST00000614755 70 ntBASIC5.07□□□□□ -1.6
LIM2P55344 AP003400.3-201ENST00000624904 346 ntBASIC5.07□□□□□ -1.6
LIM2P55344 AC099654.6-201ENST00000636487 512 ntBASIC5.07□□□□□ -1.6
LIM2P55344 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.07□□□□□ -1.6
LIM2P55344 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
LIM2P55344 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
LIM2P55344 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.07□□□□□ -1.6
LIM2P55344 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
LIM2P55344 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LIM2P55344 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
LIM2P55344 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
LIM2P55344 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.07□□□□□ -1.6
LIM2P55344 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LIM2P55344 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LIM2P55344 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
LIM2P55344 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LIM2P55344 AC092376.2-201ENST00000622621 4116 ntBASIC5.07□□□□□ -1.6
LIM2P55344 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LIM2P55344 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LIM2P55344 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LIM2P55344 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LIM2P55344 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.06□□□□□ -1.6
LIM2P55344 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LIM2P55344 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LIM2P55344 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.06□□□□□ -1.6
LIM2P55344 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.06□□□□□ -1.6
LIM2P55344 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LIM2P55344 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
LIM2P55344 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
LIM2P55344 RN7SKP162-201ENST00000363605 345 ntBASIC5.06□□□□□ -1.6
LIM2P55344 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LIM2P55344 NPM1P4-201ENST00000414095 812 ntBASIC5.06□□□□□ -1.6
LIM2P55344 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.06□□□□□ -1.6
LIM2P55344 AC013268.2-201ENST00000420753 337 ntBASIC5.06□□□□□ -1.6
LIM2P55344 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.06□□□□□ -1.6
LIM2P55344 AC017019.1-201ENST00000426129 261 ntBASIC5.06□□□□□ -1.6
LIM2P55344 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LIM2P55344 CFL1P1-202ENST00000432948 411 ntBASIC5.06□□□□□ -1.6
LIM2P55344 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.06□□□□□ -1.6
LIM2P55344 AC090804.1-201ENST00000448870 490 ntBASIC5.06□□□□□ -1.6
LIM2P55344 RPS26P41-201ENST00000450370 284 ntBASIC5.06□□□□□ -1.6
LIM2P55344 AP002371.1-201ENST00000463604 433 ntBASIC5.06□□□□□ -1.6
LIM2P55344 AC058823.1-201ENST00000485315 474 ntBASIC5.06□□□□□ -1.6
LIM2P55344 RN7SL423P-201ENST00000486202 304 ntBASIC5.06□□□□□ -1.6
LIM2P55344 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.06□□□□□ -1.6
LIM2P55344 ATP5LP3-201ENST00000514223 304 ntBASIC5.06□□□□□ -1.6
LIM2P55344 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.06□□□□□ -1.6
LIM2P55344 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.06□□□□□ -1.6
LIM2P55344 YWHABP2-201ENST00000540201 713 ntBASIC5.06□□□□□ -1.6
LIM2P55344 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.06□□□□□ -1.6
LIM2P55344 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.06□□□□□ -1.6
LIM2P55344 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.06□□□□□ -1.6
LIM2P55344 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.06□□□□□ -1.6
LIM2P55344 FKBP1AP1-201ENST00000594588 318 ntBASIC5.06□□□□□ -1.6
LIM2P55344 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.06□□□□□ -1.6
LIM2P55344 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.06□□□□□ -1.6
LIM2P55344 MIR6729-201ENST00000618194 65 ntBASIC5.06□□□□□ -1.6
LIM2P55344 MIR6837-201ENST00000620884 64 ntBASIC5.06□□□□□ -1.6
LIM2P55344 AC136428.4-201ENST00000634254 1155 ntBASIC5.06□□□□□ -1.6
LIM2P55344 RFC1-217ENST00000639695 867 ntTSL 5 BASIC5.06□□□□□ -1.6
LIM2P55344 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.06□□□□□ -1.6
LIM2P55344 GVINP1-202ENST00000531871 7271 ntBASIC5.06□□□□□ -1.6
LIM2P55344 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LIM2P55344 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
LIM2P55344 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LIM2P55344 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
LIM2P55344 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
LIM2P55344 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LIM2P55344 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LIM2P55344 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.06□□□□□ -1.6
LIM2P55344 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.05□□□□□ -1.6
LIM2P55344 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LIM2P55344 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LIM2P55344 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.05□□□□□ -1.6
LIM2P55344 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
LIM2P55344 AC079298.1-201ENST00000625026 1619 ntBASIC5.05□□□□□ -1.6
LIM2P55344 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LIM2P55344 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
LIM2P55344 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
LIM2P55344 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.05□□□□□ -1.6
LIM2P55344 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
LIM2P55344 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
LIM2P55344 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.05□□□□□ -1.6
LIM2P55344 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
LIM2P55344 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 136.4 ms