Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HMGCS2P54868 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HMGCS2P54868 IRF5P1-201ENST00000504852 2164 ntBASIC6.1□□□□□ -1.43
HMGCS2P54868 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HMGCS2P54868 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HMGCS2P54868 TEX41-205ENST00000431734 529 ntTSL 4 BASIC6.1□□□□□ -1.43
HMGCS2P54868 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC6.1□□□□□ -1.43
HMGCS2P54868 LINC02210-201ENST00000444561 288 ntBASIC6.1□□□□□ -1.43
HMGCS2P54868 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
HMGCS2P54868 RPS29P33-201ENST00000456717 146 ntBASIC6.1□□□□□ -1.43
HMGCS2P54868 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC6.1□□□□□ -1.43
HMGCS2P54868 RPL7P16-201ENST00000479738 738 ntBASIC6.1□□□□□ -1.43
HMGCS2P54868 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC6.1□□□□□ -1.43
HMGCS2P54868 HMGN2P25-201ENST00000486956 268 ntBASIC6.1□□□□□ -1.43
HMGCS2P54868 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC6.1□□□□□ -1.43
HMGCS2P54868 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC6.1□□□□□ -1.43
HMGCS2P54868 AC008033.2-201ENST00000542626 177 ntBASIC6.1□□□□□ -1.43
HMGCS2P54868 GSTP1P1-201ENST00000548078 319 ntBASIC6.1□□□□□ -1.43
HMGCS2P54868 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC6.1□□□□□ -1.43
HMGCS2P54868 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HMGCS2P54868 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC6.1□□□□□ -1.43
HMGCS2P54868 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC6.1□□□□□ -1.43
HMGCS2P54868 PRELID3BP3-201ENST00000584963 545 ntBASIC6.1□□□□□ -1.43
HMGCS2P54868 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC6.1□□□□□ -1.43
HMGCS2P54868 AL627230.1-201ENST00000613077 211 ntBASIC6.1□□□□□ -1.43
HMGCS2P54868 AL591926.8-201ENST00000616876 211 ntBASIC6.1□□□□□ -1.43
HMGCS2P54868 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC6.1□□□□□ -1.43
HMGCS2P54868 AC112694.2-201ENST00000623697 768 ntBASIC6.1□□□□□ -1.43
HMGCS2P54868 AC016542.2-201ENST00000624201 619 ntBASIC6.1□□□□□ -1.43
HMGCS2P54868 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC6.1□□□□□ -1.43
HMGCS2P54868 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HMGCS2P54868 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC6.1□□□□□ -1.43
HMGCS2P54868 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HMGCS2P54868 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
HMGCS2P54868 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HMGCS2P54868 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC6.1□□□□□ -1.43
HMGCS2P54868 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC6.1□□□□□ -1.43
HMGCS2P54868 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
HMGCS2P54868 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HMGCS2P54868 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.09□□□□□ -1.43
HMGCS2P54868 NXF4-202ENST00000416098 1465 ntBASIC6.09□□□□□ -1.43
HMGCS2P54868 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC6.09□□□□□ -1.43
HMGCS2P54868 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HMGCS2P54868 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HMGCS2P54868 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC6.09□□□□□ -1.43
HMGCS2P54868 HSPA8P14-201ENST00000552265 1805 ntBASIC6.09□□□□□ -1.43
HMGCS2P54868 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
HMGCS2P54868 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.09□□□□□ -1.43
HMGCS2P54868 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
HMGCS2P54868 RN7SKP95-201ENST00000362860 303 ntBASIC6.09□□□□□ -1.43
HMGCS2P54868 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.09□□□□□ -1.43
HMGCS2P54868 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.09□□□□□ -1.43
HMGCS2P54868 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC6.09□□□□□ -1.43
HMGCS2P54868 DDX39BP1-205ENST00000422507 192 ntBASIC6.09□□□□□ -1.43
HMGCS2P54868 NDUFA5P8-201ENST00000449019 346 ntBASIC6.09□□□□□ -1.43
HMGCS2P54868 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HMGCS2P54868 AC009220.1-201ENST00000451614 275 ntBASIC6.09□□□□□ -1.43
HMGCS2P54868 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC6.09□□□□□ -1.43
HMGCS2P54868 AC006463.2-201ENST00000473326 348 ntBASIC6.09□□□□□ -1.43
HMGCS2P54868 AP000797.2-201ENST00000475768 606 ntBASIC6.09□□□□□ -1.43
HMGCS2P54868 MGST2-204ENST00000506797 634 ntTSL 2 BASIC6.09□□□□□ -1.43
HMGCS2P54868 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC6.09□□□□□ -1.43
HMGCS2P54868 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC6.09□□□□□ -1.43
HMGCS2P54868 AL671862.1-201ENST00000515851 349 ntBASIC6.09□□□□□ -1.43
HMGCS2P54868 SCARNA20.4-201ENST00000516969 131 ntBASIC6.09□□□□□ -1.43
HMGCS2P54868 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC6.09□□□□□ -1.43
HMGCS2P54868 AC079075.1-201ENST00000559543 878 ntBASIC6.09□□□□□ -1.43
HMGCS2P54868 MRPS21P9-201ENST00000571150 257 ntBASIC6.09□□□□□ -1.43
HMGCS2P54868 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
HMGCS2P54868 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC6.09□□□□□ -1.43
HMGCS2P54868 AC135068.12-201ENST00000637370 931 ntBASIC6.09□□□□□ -1.43
HMGCS2P54868 AL596275.2-208ENST00000641192 594 ntBASIC6.09□□□□□ -1.43
HMGCS2P54868 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
HMGCS2P54868 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HMGCS2P54868 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HMGCS2P54868 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
HMGCS2P54868 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
HMGCS2P54868 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
HMGCS2P54868 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.09□□□□□ -1.44
HMGCS2P54868 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC6.09□□□□□ -1.44
HMGCS2P54868 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.09□□□□□ -1.44
HMGCS2P54868 AC005225.5-201ENST00000623547 2225 ntBASIC6.09□□□□□ -1.44
HMGCS2P54868 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.44
HMGCS2P54868 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.44
HMGCS2P54868 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
HMGCS2P54868 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HMGCS2P54868 AL359715.3-201ENST00000569267 2123 ntBASIC6.08□□□□□ -1.44
HMGCS2P54868 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HMGCS2P54868 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
HMGCS2P54868 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HMGCS2P54868 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HMGCS2P54868 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC6.08□□□□□ -1.44
HMGCS2P54868 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HMGCS2P54868 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HMGCS2P54868 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC6.08□□□□□ -1.44
HMGCS2P54868 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
HMGCS2P54868 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6.08□□□□□ -1.44
HMGCS2P54868 GNAS-202ENST00000306090 477 ntTSL 5 BASIC6.08□□□□□ -1.44
HMGCS2P54868 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
HMGCS2P54868 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms